RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PPIP5K2O43314 1243 aa30.22■■■□□ 2.43
LSM4-204ENST00000594828 DPP8Q6V1X1 898 aaPredicted RBP30.22■■■□□ 2.43
LSM4-204ENST00000594828 TMC4Q7Z404 712 aa30.22■■■□□ 2.43
LSM4-204ENST00000594828 NIM1KQ8IY84 436 aa30.22■■■□□ 2.43
LSM4-204ENST00000594828 MPNDQ8N594 471 aa30.22■■■□□ 2.43
LSM4-204ENST00000594828 ZBTB38Q8NAP3 1195 aaPredicted RBP30.22■■■□□ 2.43
LSM4-204ENST00000594828 COL4A5P29400 1685 aa30.21■■■□□ 2.43
LSM4-204ENST00000594828 CCDC191Q8NCU4 936 aa30.21■■■□□ 2.43
LSM4-204ENST00000594828 METTL22Q9BUU2 404 aaPredicted RBP30.21■■■□□ 2.43
LSM4-204ENST00000594828 RTFDC1Q9BY42 306 aaPredicted RBP30.21■■■□□ 2.43
LSM4-204ENST00000594828 GJA3Q9Y6H8 435 aa30.21■■■□□ 2.43
LSM4-204ENST00000594828 DDX60Q8IY21 1712 aaKnown RBP30.21■■■□□ 2.43
LSM4-204ENST00000594828 AOC3Q16853 763 aa30.2■■■□□ 2.43
LSM4-204ENST00000594828 WDR63Q8IWG1 891 aa30.2■■■□□ 2.43
LSM4-204ENST00000594828 HSP90B1P14625 803 aaKnown RBP30.19■■■□□ 2.42
LSM4-204ENST00000594828 EPHX2P34913 555 aa30.19■■■□□ 2.42
LSM4-204ENST00000594828 LDHDQ86WU2 507 aa30.19■■■□□ 2.42
LSM4-204ENST00000594828 KLRG1Q96E93 195 aa30.19■■■□□ 2.42
LSM4-204ENST00000594828 MAP3K2Q9Y2U5 619 aa30.19■■■□□ 2.42
LSM4-204ENST00000594828 EAPPQ56P03 285 aaPredicted RBP30.18■■■□□ 2.42
LSM4-204ENST00000594828 KSR2Q6VAB6 950 aa30.18■■■□□ 2.42
LSM4-204ENST00000594828 FAM9BQ8IZU0 186 aa30.18■■■□□ 2.42
LSM4-204ENST00000594828 CWC25Q9NXE8 425 aaPredicted RBP30.18■■■□□ 2.42
LSM4-204ENST00000594828 CELF1Q92879 486 aaKnown RBP30.17■■■□□ 2.42
LSM4-204ENST00000594828 PNMA8AQ86V59 439 aaPredicted RBP30.16■■■□□ 2.42
LSM4-204ENST00000594828 TAF1P21675 1872 aa30.16■■■□□ 2.42
LSM4-204ENST00000594828 PI4KAP2A4QPH2 592 aa30.15■■■□□ 2.42
LSM4-204ENST00000594828 SLC4A2P04920 1241 aa30.15■■■□□ 2.42
LSM4-204ENST00000594828 PCCAP05165 728 aaPredicted RBP30.15■■■□□ 2.42
LSM4-204ENST00000594828 PI4KAP1Q8N8J0 262 aa30.15■■■□□ 2.42
LSM4-204ENST00000594828 ZNRF3Q9ULT6 936 aa30.15■■■□□ 2.42
LSM4-204ENST00000594828 CLEC11AQ9Y240 323 aa30.15■■■□□ 2.42
LSM4-204ENST00000594828 FANCIQ9NVI1 1328 aa30.15■■■□□ 2.42
LSM4-204ENST00000594828 LMOD1P29536 600 aaPredicted RBP30.13■■■□□ 2.41
LSM4-204ENST00000594828 KIAA2012Q0VF49 1180 aa30.13■■■□□ 2.41
LSM4-204ENST00000594828 JARID2Q92833 1246 aaPredicted RBP30.13■■■□□ 2.41
LSM4-204ENST00000594828 PDE8AO60658 829 aa30.12■■■□□ 2.41
LSM4-204ENST00000594828 RPS8P62241 208 aaKnown RBP30.12■■■□□ 2.41
LSM4-204ENST00000594828 NEXNQ0ZGT2 675 aa30.12■■■□□ 2.41
LSM4-204ENST00000594828 G2E3Q7L622 706 aa30.12■■■□□ 2.41
LSM4-204ENST00000594828 NSFL1CQ9UNZ2 370 aaKnown RBP30.12■■■□□ 2.41
LSM4-204ENST00000594828 IGKV5-2P06315 115 aa30.1■■■□□ 2.41
LSM4-204ENST00000594828 CXCL9Q07325 125 aa30.1■■■□□ 2.41
LSM4-204ENST00000594828 SCNN1DP51172 638 aa30.09■■■□□ 2.41
LSM4-204ENST00000594828 CCDC152Q4G0S7 254 aa30.09■■■□□ 2.41
LSM4-204ENST00000594828 SEC31BQ9NQW1 1179 aa30.09■■■□□ 2.41
LSM4-204ENST00000594828 VAMP4O75379 141 aa30.08■■■□□ 2.41
LSM4-204ENST00000594828 EXOSC9Q06265 439 aaKnown RBP30.08■■■□□ 2.41
LSM4-204ENST00000594828 JMYQ8N9B5 988 aa30.08■■■□□ 2.41
LSM4-204ENST00000594828 ITGBL1O95965 494 aaPredicted RBP30.07■■■□□ 2.4
LSM4-204ENST00000594828 EPS15P42566 896 aa30.07■■■□□ 2.4
LSM4-204ENST00000594828 CREBZFQ9NS37 354 aa30.07■■■□□ 2.4
LSM4-204ENST00000594828 LRRC37AA6NMS7 1700 aa30.07■■■□□ 2.4
LSM4-204ENST00000594828 PASKQ96RG2 1323 aa30.06■■■□□ 2.4
LSM4-204ENST00000594828 CDHR2Q9BYE9 1310 aa30.06■■■□□ 2.4
LSM4-204ENST00000594828 GPSM2P81274 684 aa30.06■■■□□ 2.4
LSM4-204ENST00000594828 FLIIQ13045 1269 aa30.06■■■□□ 2.4
LSM4-204ENST00000594828 WASHC4Q2M389 1173 aa30.06■■■□□ 2.4
LSM4-204ENST00000594828 SPINK5Q9NQ38 1064 aaPredicted RBP30.06■■■□□ 2.4
LSM4-204ENST00000594828 C6orf229H3BNL8 230 aa30.05■■■□□ 2.4
LSM4-204ENST00000594828 CWF19L2Q2TBE0 894 aaKnown RBP30.05■■■□□ 2.4
LSM4-204ENST00000594828 CIAPIN1Q6FI81 312 aa30.05■■■□□ 2.4
LSM4-204ENST00000594828 CCDC85AQ96PX6 553 aaPredicted RBP30.05■■■□□ 2.4
LSM4-204ENST00000594828 COL4A1P02462 1669 aa30.04■■■□□ 2.4
LSM4-204ENST00000594828 DUOX1Q9NRD9 1551 aa30.04■■■□□ 2.4
LSM4-204ENST00000594828 NEURL1BA8MQ27 555 aa30.04■■■□□ 2.4
LSM4-204ENST00000594828 TNIP1Q15025 636 aa30.04■■■□□ 2.4
LSM4-204ENST00000594828 MAP1SQ66K74 1059 aaPredicted RBP30.04■■■□□ 2.4
LSM4-204ENST00000594828 CNTROBQ8N137 903 aa30.04■■■□□ 2.4
LSM4-204ENST00000594828 MYH16Q9H6N6 1097 aa30.04■■■□□ 2.4
LSM4-204ENST00000594828 POLLQ9UGP5 575 aa30.04■■■□□ 2.4
LSM4-204ENST00000594828 ADAMTSL1Q8N6G6 1762 aa30.03■■■□□ 2.4
LSM4-204ENST00000594828 LTBP1Q14766 1721 aa30.03■■■□□ 2.4
LSM4-204ENST00000594828 RAD17O75943 681 aa30.03■■■□□ 2.4
LSM4-204ENST00000594828 FKBP5Q13451 457 aaPredicted RBP30.03■■■□□ 2.4
LSM4-204ENST00000594828 USP50Q70EL3 339 aaPredicted RBP30.03■■■□□ 2.4
LSM4-204ENST00000594828 GPRC5DQ9NZD1 345 aa30.03■■■□□ 2.4
LSM4-204ENST00000594828 RIMBP2O15034 1052 aa30.02■■■□□ 2.4
LSM4-204ENST00000594828 EYA3Q99504 573 aa30.02■■■□□ 2.4
LSM4-204ENST00000594828 YDJCA8MPS7 323 aa30.01■■■□□ 2.39
LSM4-204ENST00000594828 TBC1D16Q8TBP0 767 aa30.01■■■□□ 2.39
LSM4-204ENST00000594828 GMPSP49915 693 aaPredicted RBP30■■■□□ 2.39
LSM4-204ENST00000594828 CTSWP56202 376 aa30■■■□□ 2.39
LSM4-204ENST00000594828 ANKRD18AQ8IVF6 992 aa30■■■□□ 2.39
LSM4-204ENST00000594828 DNAAF4Q8WXU2 420 aa30■■■□□ 2.39
LSM4-204ENST00000594828 BCL2L13Q9BXK5 485 aa30■■■□□ 2.39
LSM4-204ENST00000594828 ADARB2Q9NS39 739 aaKnown RBP30■■■□□ 2.39
LSM4-204ENST00000594828 PODXL2Q9NZ53 605 aa30■■■□□ 2.39
LSM4-204ENST00000594828 ANKIB1Q9P2G1 1089 aa30■■■□□ 2.39
LSM4-204ENST00000594828 H7C1W4 665 aa29.99■■■□□ 2.39
LSM4-204ENST00000594828 TTLL11Q8NHH1 800 aa29.99■■■□□ 2.39
LSM4-204ENST00000594828 TMEM88BA6NKF7 163 aa29.98■■■□□ 2.39
LSM4-204ENST00000594828 GCKRQ14397 625 aa29.98■■■□□ 2.39
LSM4-204ENST00000594828 UBE3BQ7Z3V4 1068 aa29.98■■■□□ 2.39
LSM4-204ENST00000594828 DBNDD1Q9H9R9 158 aa29.98■■■□□ 2.39
LSM4-204ENST00000594828 CDC5LQ99459 802 aaKnown RBP29.97■■■□□ 2.39
LSM4-204ENST00000594828 ZC3H12CQ9C0D7 883 aaKnown RBP29.97■■■□□ 2.39
LSM4-204ENST00000594828 LINS1Q8NG48 757 aa29.96■■■□□ 2.39
LSM4-204ENST00000594828 GPR101Q96P66 508 aaPredicted RBP29.96■■■□□ 2.39
LSM4-204ENST00000594828 MKRN1Q9UHC7 482 aaKnown RBP29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms