RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 ZNF622Q969S3 477 aaKnown RBP eCLIP14.16□□□□□ -0.14
XRCC1-204ENST00000594511 C9orf78Q9NZ63 289 aaPredicted RBP14.16□□□□□ -0.14
XRCC1-204ENST00000594511 MS4A1P11836 297 aa14.15□□□□□ -0.14
XRCC1-204ENST00000594511 RLBP1P12271 317 aa14.15□□□□□ -0.14
XRCC1-204ENST00000594511 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
XRCC1-204ENST00000594511 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
XRCC1-204ENST00000594511 EPHA10Q5JZY3 1008 aa14.15□□□□□ -0.14
XRCC1-204ENST00000594511 PRPF40BQ6NWY9 871 aaKnown RBP14.15□□□□□ -0.14
XRCC1-204ENST00000594511 RPGRQ92834 1020 aaKnown RBP14.15□□□□□ -0.14
XRCC1-204ENST00000594511 GRAPQ13588 217 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 CCDC152Q4G0S7 254 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 GRIPAP1Q4V328 841 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 CC2D2BQ6DHV5 1058 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 DDX46Q7L014 1031 aaKnown RBP14.14□□□□□ -0.15
XRCC1-204ENST00000594511 TMC4Q7Z404 712 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 TMEM57Q8N5G2 664 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 GRAPLQ8TC17 118 aaPredicted RBP14.14□□□□□ -0.15
XRCC1-204ENST00000594511 SUCLG2Q96I99 432 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 BCS1LQ9Y276 419 aa14.14□□□□□ -0.15
XRCC1-204ENST00000594511 FER1L6Q2WGJ9 1857 aa14.13□□□□□ -0.15
XRCC1-204ENST00000594511 GPR162Q16538 588 aa14.13□□□□□ -0.15
XRCC1-204ENST00000594511 HDAC5Q9UQL6 1122 aa14.13□□□□□ -0.15
XRCC1-204ENST00000594511 ATP6V0A2Q9Y487 856 aa14.13□□□□□ -0.15
XRCC1-204ENST00000594511 COL4A1P02462 1669 aa14.13□□□□□ -0.15
XRCC1-204ENST00000594511 LTBP3Q9NS15 1303 aa14.13□□□□□ -0.15
XRCC1-204ENST00000594511 TAF1P21675 1872 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 ZBTB7BO15156 539 aaPredicted RBP14.12□□□□□ -0.15
XRCC1-204ENST00000594511 GNAI3P08754 354 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 RPS8P62241 208 aaKnown RBP14.12□□□□□ -0.15
XRCC1-204ENST00000594511 SOGA3Q5TF21 947 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 SP8Q8IXZ3 490 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 ANKRD44Q8N8A2 993 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 CELF1Q92879 486 aaKnown RBP14.12□□□□□ -0.15
XRCC1-204ENST00000594511 CLUAP1Q96AJ1 413 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 SEC31BQ9NQW1 1179 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
XRCC1-204ENST00000594511 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.11□□□□□ -0.15
XRCC1-204ENST00000594511 MEIS3Q99687 375 aa14.11□□□□□ -0.15
XRCC1-204ENST00000594511 GREM2Q9H772 168 aa14.11□□□□□ -0.15
XRCC1-204ENST00000594511 C21orf2O43822 256 aa14.1□□□□□ -0.15
XRCC1-204ENST00000594511 MTX1Q13505 466 aa14.1□□□□□ -0.15
XRCC1-204ENST00000594511 LMBR1LQ6UX01 489 aa14.1□□□□□ -0.15
XRCC1-204ENST00000594511 PANK1Q8TE04 598 aa14.1□□□□□ -0.15
XRCC1-204ENST00000594511 BICC1Q9H694 974 aaKnown RBP14.1□□□□□ -0.15
XRCC1-204ENST00000594511 CACNA1SQ13698 1873 aa14.1□□□□□ -0.15
XRCC1-204ENST00000594511 DCAF8L1A6NGE4 600 aa14.09□□□□□ -0.15
XRCC1-204ENST00000594511 NFKBIEO00221 500 aa14.09□□□□□ -0.15
XRCC1-204ENST00000594511 PPEF1O14829 653 aaPredicted RBP14.09□□□□□ -0.15
XRCC1-204ENST00000594511 PLIN1O60240 522 aa14.09□□□□□ -0.15
XRCC1-204ENST00000594511 UBTFL1P0CB47 393 aaPredicted RBP14.09□□□□□ -0.15
XRCC1-204ENST00000594511 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
XRCC1-204ENST00000594511 RTKN2Q8IZC4 609 aa14.09□□□□□ -0.15
XRCC1-204ENST00000594511 CDC5LQ99459 802 aaKnown RBP14.09□□□□□ -0.15
XRCC1-204ENST00000594511 PSMD1Q99460 953 aa14.09□□□□□ -0.15
XRCC1-204ENST00000594511 RTFDC1Q9BY42 306 aaPredicted RBP14.09□□□□□ -0.15
XRCC1-204ENST00000594511 BSDC1Q9NW68 430 aaPredicted RBP14.09□□□□□ -0.15
XRCC1-204ENST00000594511 SBF1O95248 1867 aa14.09□□□□□ -0.15
XRCC1-204ENST00000594511 GOLGB1Q14789 3259 aaKnown RBP14.09□□□□□ -0.15
XRCC1-204ENST00000594511 LTBP1Q14766 1721 aa14.08□□□□□ -0.16
XRCC1-204ENST00000594511 ITGA6P23229 1130 aa14.08□□□□□ -0.16
XRCC1-204ENST00000594511 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.16
XRCC1-204ENST00000594511 MVPQ14764 893 aaKnown RBP14.08□□□□□ -0.16
XRCC1-204ENST00000594511 FAM161AQ3B820 660 aa14.08□□□□□ -0.16
XRCC1-204ENST00000594511 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
XRCC1-204ENST00000594511 VPS33BQ9H267 617 aa14.08□□□□□ -0.16
XRCC1-204ENST00000594511 PODXL2Q9NZ53 605 aa14.08□□□□□ -0.16
XRCC1-204ENST00000594511 CHD4Q14839 1912 aa14.07□□□□□ -0.16
XRCC1-204ENST00000594511 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
XRCC1-204ENST00000594511 PRELPP51888 382 aa14.07□□□□□ -0.16
XRCC1-204ENST00000594511 RRP1P56182 461 aaKnown RBP14.07□□□□□ -0.16
XRCC1-204ENST00000594511 IFIT5Q13325 482 aaKnown RBP14.07□□□□□ -0.16
XRCC1-204ENST00000594511 C20orf194Q5TEA3 1177 aa14.07□□□□□ -0.16
XRCC1-204ENST00000594511 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
XRCC1-204ENST00000594511 WWC3Q9ULE0 1092 aa14.07□□□□□ -0.16
XRCC1-204ENST00000594511 GNAI2P04899 355 aa14.06□□□□□ -0.16
XRCC1-204ENST00000594511 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
XRCC1-204ENST00000594511 OLFM4Q6UX06 510 aa14.06□□□□□ -0.16
XRCC1-204ENST00000594511 ARHGAP27Q6ZUM4 889 aa14.06□□□□□ -0.16
XRCC1-204ENST00000594511 ZBTB40Q9NUA8 1239 aa14.06□□□□□ -0.16
XRCC1-204ENST00000594511 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
XRCC1-204ENST00000594511 LRRFIP2Q9Y608 721 aaKnown RBP14.06□□□□□ -0.16
XRCC1-204ENST00000594511 CCDC57Q2TAC2 916 aa14.05□□□□□ -0.16
XRCC1-204ENST00000594511 SLC51AQ86UW1 340 aa14.05□□□□□ -0.16
XRCC1-204ENST00000594511 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
XRCC1-204ENST00000594511 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
XRCC1-204ENST00000594511 CCDC85AQ96PX6 553 aaPredicted RBP14.05□□□□□ -0.16
XRCC1-204ENST00000594511 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
XRCC1-204ENST00000594511 MINPP1Q9UNW1 487 aa14.05□□□□□ -0.16
XRCC1-204ENST00000594511 RIPOR2Q9Y4F9 1068 aa14.05□□□□□ -0.16
XRCC1-204ENST00000594511 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
XRCC1-204ENST00000594511 DICER1Q9UPY3 1922 aaKnown RBP14.04□□□□□ -0.16
XRCC1-204ENST00000594511 IGHMBP2P38935 993 aaKnown RBP14.04□□□□□ -0.16
XRCC1-204ENST00000594511 PTPN12Q05209 780 aaKnown RBP14.04□□□□□ -0.16
XRCC1-204ENST00000594511 CHMP4BQ9H444 224 aaKnown RBP14.04□□□□□ -0.16
XRCC1-204ENST00000594511 COPRSQ9NQ92 184 aa14.04□□□□□ -0.16
XRCC1-204ENST00000594511 COG6Q9Y2V7 657 aa14.04□□□□□ -0.16
XRCC1-204ENST00000594511 LMNB1P20700 586 aa14.03□□□□□ -0.16
XRCC1-204ENST00000594511 ATP8B2P98198 1209 aa14.03□□□□□ -0.16
XRCC1-204ENST00000594511 POLA2Q14181 598 aa14.03□□□□□ -0.16
XRCC1-204ENST00000594511 MPNDQ8N594 471 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms