RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 CACNA1SQ13698 1873 aa25.58■■□□□ 1.69
COPE-204ENST00000593827 DPP8Q6V1X1 898 aaPredicted RBP25.58■■□□□ 1.69
COPE-204ENST00000593827 G2E3Q7L622 706 aa25.58■■□□□ 1.69
COPE-204ENST00000593827 DNAAF4Q8WXU2 420 aa25.58■■□□□ 1.69
COPE-204ENST00000593827 CDHR2Q9BYE9 1310 aa25.58■■□□□ 1.69
COPE-204ENST00000593827 MPNDQ8N594 471 aa25.57■■□□□ 1.68
COPE-204ENST00000593827 NEURL1BA8MQ27 555 aa25.56■■□□□ 1.68
COPE-204ENST00000593827 IGKV5-2P06315 115 aa25.56■■□□□ 1.68
COPE-204ENST00000593827 LARGE2Q8N3Y3 721 aa25.56■■□□□ 1.68
COPE-204ENST00000593827 LINS1Q8NG48 757 aa25.56■■□□□ 1.68
COPE-204ENST00000593827 SNED1Q8TER0 1413 aa25.55■■□□□ 1.68
COPE-204ENST00000593827 IQCA1LA6NCM1 817 aa25.55■■□□□ 1.68
COPE-204ENST00000593827 FSTL1Q12841 308 aa25.55■■□□□ 1.68
COPE-204ENST00000593827 TIAM2Q8IVF5 1701 aa25.54■■□□□ 1.68
COPE-204ENST00000593827 EIF6P56537 245 aaKnown RBP25.54■■□□□ 1.68
COPE-204ENST00000593827 RTFDC1Q9BY42 306 aaPredicted RBP25.54■■□□□ 1.68
COPE-204ENST00000593827 FZD9O00144 591 aa25.53■■□□□ 1.68
COPE-204ENST00000593827 RPS8P62241 208 aaKnown RBP25.53■■□□□ 1.68
COPE-204ENST00000593827 SLFN5Q08AF3 891 aa25.53■■□□□ 1.68
COPE-204ENST00000593827 CWF19L2Q2TBE0 894 aaKnown RBP25.53■■□□□ 1.68
COPE-204ENST00000593827 NIM1KQ8IY84 436 aa25.53■■□□□ 1.68
COPE-204ENST00000593827 PPIP5K2O43314 1243 aa25.52■■□□□ 1.68
COPE-204ENST00000593827 GCKRQ14397 625 aa25.52■■□□□ 1.68
COPE-204ENST00000593827 SMC1BQ8NDV3 1235 aa25.52■■□□□ 1.68
COPE-204ENST00000593827 DDNO94850 711 aaPredicted RBP25.51■■□□□ 1.67
COPE-204ENST00000593827 HSPA6P17066 643 aa25.51■■□□□ 1.67
COPE-204ENST00000593827 L3MBTL3Q96JM7 780 aaPredicted RBP25.51■■□□□ 1.67
COPE-204ENST00000593827 DICER1Q9UPY3 1922 aaKnown RBP25.51■■□□□ 1.67
COPE-204ENST00000593827 CTSWP56202 376 aa25.5■■□□□ 1.67
COPE-204ENST00000593827 GPC2Q8N158 579 aa25.5■■□□□ 1.67
COPE-204ENST00000593827 CELF1Q92879 486 aaKnown RBP25.5■■□□□ 1.67
COPE-204ENST00000593827 CDC5LQ99459 802 aaKnown RBP25.5■■□□□ 1.67
COPE-204ENST00000593827 H7C1W4 665 aa25.49■■□□□ 1.67
COPE-204ENST00000593827 CT47B1P0C2W7 299 aaPredicted RBP25.49■■□□□ 1.67
COPE-204ENST00000593827 UBE3BQ7Z3V4 1068 aa25.49■■□□□ 1.67
COPE-204ENST00000593827 CACNA1FO60840 1977 aa25.49■■□□□ 1.67
COPE-204ENST00000593827 CCDC88AQ3V6T2 1871 aa25.49■■□□□ 1.67
COPE-204ENST00000593827 ANKRD18AQ8IVF6 992 aa25.48■■□□□ 1.67
COPE-204ENST00000593827 NSFL1CQ9UNZ2 370 aaKnown RBP25.48■■□□□ 1.67
COPE-204ENST00000593827 DDX60Q8IY21 1712 aaKnown RBP25.48■■□□□ 1.67
COPE-204ENST00000593827 KIAA2012Q0VF49 1180 aa25.47■■□□□ 1.67
COPE-204ENST00000593827 AOC3Q16853 763 aa25.47■■□□□ 1.67
COPE-204ENST00000593827 JARID2Q92833 1246 aaPredicted RBP25.47■■□□□ 1.67
COPE-204ENST00000593827 EYA3Q99504 573 aa25.47■■□□□ 1.67
COPE-204ENST00000593827 LAMB2P55268 1798 aa25.46■■□□□ 1.67
COPE-204ENST00000593827 WDR90Q96KV7 1748 aa25.46■■□□□ 1.67
COPE-204ENST00000593827 ZNF541Q9H0D2 1346 aa25.46■■□□□ 1.67
COPE-204ENST00000593827 PLA2G12BQ9BX93 195 aa25.46■■□□□ 1.67
COPE-204ENST00000593827 PTPRCP08575 1304 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 APLP1P51693 650 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 BEND3Q5T5X7 828 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 MIER1Q8N108 512 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 TTLL11Q8NHH1 800 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 SEC31BQ9NQW1 1179 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 HACL1Q9UJ83 578 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 ZNRF3Q9ULT6 936 aa25.45■■□□□ 1.66
COPE-204ENST00000593827 RTL9Q8NET4 1388 aa25.44■■□□□ 1.66
COPE-204ENST00000593827 F6X3S4 739 aa25.44■■□□□ 1.66
COPE-204ENST00000593827 ALDH1L1O75891 902 aa25.44■■□□□ 1.66
COPE-204ENST00000593827 LMOD1P29536 600 aaPredicted RBP25.44■■□□□ 1.66
COPE-204ENST00000593827 ALDH1L2Q3SY69 923 aa25.44■■□□□ 1.66
COPE-204ENST00000593827 ANKIB1Q9P2G1 1089 aa25.44■■□□□ 1.66
COPE-204ENST00000593827 POTECB2RU33 542 aa25.43■■□□□ 1.66
COPE-204ENST00000593827 C6orf229H3BNL8 230 aa25.43■■□□□ 1.66
COPE-204ENST00000593827 WASHC4Q2M389 1173 aa25.43■■□□□ 1.66
COPE-204ENST00000593827 TRMT2AQ8IZ69 625 aaKnown RBP25.43■■□□□ 1.66
COPE-204ENST00000593827 CCDC85AQ96PX6 553 aaPredicted RBP25.43■■□□□ 1.66
COPE-204ENST00000593827 GJA3Q9Y6H8 435 aa25.43■■□□□ 1.66
COPE-204ENST00000593827 SLC4A10Q6U841 1118 aa25.42■■□□□ 1.66
COPE-204ENST00000593827 PNMA8AQ86V59 439 aaPredicted RBP25.42■■□□□ 1.66
COPE-204ENST00000593827 CDCA7LQ96GN5 454 aa25.42■■□□□ 1.66
COPE-204ENST00000593827 SRCIN1Q9C0H9 1055 aa25.42■■□□□ 1.66
COPE-204ENST00000593827 PODXL2Q9NZ53 605 aa25.42■■□□□ 1.66
COPE-204ENST00000593827 IGHMBP2P38935 993 aaKnown RBP25.41■■□□□ 1.66
COPE-204ENST00000593827 TNIP1Q15025 636 aa25.41■■□□□ 1.66
COPE-204ENST00000593827 MRPL50Q8N5N7 158 aaKnown RBP25.41■■□□□ 1.66
COPE-204ENST00000593827 C9orf78Q9NZ63 289 aaPredicted RBP25.41■■□□□ 1.66
COPE-204ENST00000593827 GGA1Q9UJY5 639 aa25.41■■□□□ 1.66
COPE-204ENST00000593827 GPSM2P81274 684 aa25.4■■□□□ 1.66
COPE-204ENST00000593827 SLC51AQ86UW1 340 aa25.4■■□□□ 1.66
COPE-204ENST00000593827 TAF1DQ9H5J8 278 aaPredicted RBP25.4■■□□□ 1.66
COPE-204ENST00000593827 GREM2Q9H772 168 aa25.4■■□□□ 1.66
COPE-204ENST00000593827 BSDC1Q9NW68 430 aaPredicted RBP25.4■■□□□ 1.66
COPE-204ENST00000593827 GRM8O00222 908 aa25.39■■□□□ 1.66
COPE-204ENST00000593827 CASP7P55210 303 aa25.39■■□□□ 1.66
COPE-204ENST00000593827 LDHDQ86WU2 507 aa25.39■■□□□ 1.66
COPE-204ENST00000593827 SSH1Q8WYL5 1049 aa25.39■■□□□ 1.66
COPE-204ENST00000593827 ZC3H12CQ9C0D7 883 aaKnown RBP25.39■■□□□ 1.66
COPE-204ENST00000593827 XDHP47989 1333 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 G3V3G9 751 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 EPHX2P34913 555 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 DCAF8Q5TAQ9 597 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 CIAPIN1Q6FI81 312 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 CHADLQ6NUI6 762 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 TBC1D16Q8TBP0 767 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 SMC4Q9NTJ3 1288 aa25.38■■□□□ 1.65
COPE-204ENST00000593827 UFL1O94874 794 aa25.37■■□□□ 1.65
COPE-204ENST00000593827 CSF1RP07333 972 aa25.37■■□□□ 1.65
COPE-204ENST00000593827 ATP2B4P23634 1241 aa25.37■■□□□ 1.65
COPE-204ENST00000593827 MPHOSPH8Q99549 860 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms