RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 BBOX1O75936 387 aa19.22■□□□□ 0.67
PNKP-202ENST00000593706 LBX1P52954 281 aa19.22■□□□□ 0.67
PNKP-202ENST00000593706 MAP2K1Q02750 393 aaPredicted RBP19.22■□□□□ 0.67
PNKP-202ENST00000593706 FMR1Q06787 632 aaKnown RBP eCLIP19.22■□□□□ 0.67
PNKP-202ENST00000593706 GRM1Q13255 1194 aa19.22■□□□□ 0.67
PNKP-202ENST00000593706 TCIRG1Q13488 830 aa19.22■□□□□ 0.67
PNKP-202ENST00000593706 KRT24Q2M2I5 525 aa19.22■□□□□ 0.67
PNKP-202ENST00000593706 SP8Q8IXZ3 490 aa19.22■□□□□ 0.67
PNKP-202ENST00000593706 PRKRIP1Q9H875 184 aaPredicted RBP19.22■□□□□ 0.67
PNKP-202ENST00000593706 CHPF2Q9P2E5 772 aa19.22■□□□□ 0.67
PNKP-202ENST00000593706 TRAF5O00463 557 aa19.21■□□□□ 0.67
PNKP-202ENST00000593706 CXCL9Q07325 125 aa19.21■□□□□ 0.67
PNKP-202ENST00000593706 HDGFL1Q5TGJ6 251 aa19.21■□□□□ 0.67
PNKP-202ENST00000593706 ZNF428Q96B54 188 aa19.21■□□□□ 0.67
PNKP-202ENST00000593706 RTFDC1Q9BY42 306 aaPredicted RBP19.21■□□□□ 0.67
PNKP-202ENST00000593706 MYH3P11055 1940 aa19.21■□□□□ 0.67
PNKP-202ENST00000593706 SPEF2Q9C093 1822 aa19.21■□□□□ 0.67
PNKP-202ENST00000593706 ECE1P42892 770 aa19.2■□□□□ 0.66
PNKP-202ENST00000593706 GMPSP49915 693 aaPredicted RBP19.2■□□□□ 0.66
PNKP-202ENST00000593706 KIAA2012Q0VF49 1180 aa19.2■□□□□ 0.66
PNKP-202ENST00000593706 GRAPQ13588 217 aa19.2■□□□□ 0.66
PNKP-202ENST00000593706 CIAPIN1Q6FI81 312 aa19.2■□□□□ 0.66
PNKP-202ENST00000593706 GRAPLQ8TC17 118 aaPredicted RBP19.2■□□□□ 0.66
PNKP-202ENST00000593706 BCL2L13Q9BXK5 485 aa19.2■□□□□ 0.66
PNKP-202ENST00000593706 CDHR2Q9BYE9 1310 aa19.2■□□□□ 0.66
PNKP-202ENST00000593706 PSME4Q14997 1843 aa19.19■□□□□ 0.66
PNKP-202ENST00000593706 CHL1O00533 1208 aa19.19■□□□□ 0.66
PNKP-202ENST00000593706 RUNDC1Q96C34 613 aa19.19■□□□□ 0.66
PNKP-202ENST00000593706 CAPNS2Q96L46 248 aa19.19■□□□□ 0.66
PNKP-202ENST00000593706 RAD17O75943 681 aa19.18■□□□□ 0.66
PNKP-202ENST00000593706 HSPA8P11142 646 aaKnown RBP19.18■□□□□ 0.66
PNKP-202ENST00000593706 TNIP1Q15025 636 aa19.18■□□□□ 0.66
PNKP-202ENST00000593706 TMC4Q7Z404 712 aa19.18■□□□□ 0.66
PNKP-202ENST00000593706 BEGAINQ9BUH8 593 aa19.18■□□□□ 0.66
PNKP-202ENST00000593706 COL4A1P02462 1669 aa19.17■□□□□ 0.66
PNKP-202ENST00000593706 SCN9AQ15858 1988 aa19.17■□□□□ 0.66
PNKP-202ENST00000593706 CASP8AP2Q9UKL3 1982 aa19.17■□□□□ 0.66
PNKP-202ENST00000593706 CYP4F22Q6NT55 531 aa19.17■□□□□ 0.66
PNKP-202ENST00000593706 PLBD2Q8NHP8 589 aa19.17■□□□□ 0.66
PNKP-202ENST00000593706 HOXB7P09629 217 aa19.16■□□□□ 0.66
PNKP-202ENST00000593706 CST9Q5W186 159 aa19.16■□□□□ 0.66
PNKP-202ENST00000593706 DBF4Q9UBU7 674 aaPredicted RBP19.16■□□□□ 0.66
PNKP-202ENST00000593706 TRIM35Q9UPQ4 493 aa19.16■□□□□ 0.66
PNKP-202ENST00000593706 TLL2Q9Y6L7 1015 aa19.16■□□□□ 0.66
PNKP-202ENST00000593706 CELF2O95319 508 aaKnown RBP19.15■□□□□ 0.66
PNKP-202ENST00000593706 ANKRD13DQ6ZTN6 518 aa19.15■□□□□ 0.66
PNKP-202ENST00000593706 GPR101Q96P66 508 aaPredicted RBP19.15■□□□□ 0.66
PNKP-202ENST00000593706 GLIS2Q9BZE0 524 aaPredicted RBP19.15■□□□□ 0.66
PNKP-202ENST00000593706 AKAP11Q9UKA4 1901 aa19.15■□□□□ 0.66
PNKP-202ENST00000593706 ATP5J2-PTCD1G3V325 749 aa19.14■□□□□ 0.65
PNKP-202ENST00000593706 FAM89AQ96GI7 184 aa19.14■□□□□ 0.65
PNKP-202ENST00000593706 ZNF408Q9H9D4 720 aa19.14■□□□□ 0.65
PNKP-202ENST00000593706 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
PNKP-202ENST00000593706 HYPKQ9NX55 129 aa19.13■□□□□ 0.65
PNKP-202ENST00000593706 YDJCA8MPS7 323 aa19.12■□□□□ 0.65
PNKP-202ENST00000593706 H7C1D1 291 aa19.12■□□□□ 0.65
PNKP-202ENST00000593706 WASHC4Q2M389 1173 aa19.12■□□□□ 0.65
PNKP-202ENST00000593706 MICALL2Q8IY33 904 aa19.12■□□□□ 0.65
PNKP-202ENST00000593706 TRPM4Q8TD43 1214 aa19.12■□□□□ 0.65
PNKP-202ENST00000593706 ZC3H15Q8WU90 426 aaKnown RBP19.12■□□□□ 0.65
PNKP-202ENST00000593706 CELF1Q92879 486 aaKnown RBP19.12■□□□□ 0.65
PNKP-202ENST00000593706 CFAP44Q96MT7 982 aa19.12■□□□□ 0.65
PNKP-202ENST00000593706 ISCA1Q9BUE6 129 aa19.12■□□□□ 0.65
PNKP-202ENST00000593706 CNOT7Q9UIV1 285 aaKnown RBP19.12■□□□□ 0.65
PNKP-202ENST00000593706 NSFL1CQ9UNZ2 370 aaKnown RBP19.12■□□□□ 0.65
PNKP-202ENST00000593706 C6orf229H3BNL8 230 aa19.11■□□□□ 0.65
PNKP-202ENST00000593706 AOC2O75106 756 aa19.11■□□□□ 0.65
PNKP-202ENST00000593706 DUSP27Q5VZP5 1158 aa19.11■□□□□ 0.65
PNKP-202ENST00000593706 SAPCD2Q86UD0 394 aa19.11■□□□□ 0.65
PNKP-202ENST00000593706 DBNDD1Q9H9R9 158 aa19.11■□□□□ 0.65
PNKP-202ENST00000593706 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
PNKP-202ENST00000593706 SHTN1A0MZ66 631 aa19.1■□□□□ 0.65
PNKP-202ENST00000593706 RIMBP2O15034 1052 aa19.1■□□□□ 0.65
PNKP-202ENST00000593706 GOLGA2Q08379 1002 aa19.1■□□□□ 0.65
PNKP-202ENST00000593706 SF3B3Q15393 1217 aaKnown RBP19.1■□□□□ 0.65
PNKP-202ENST00000593706 CDC37L1Q7L3B6 337 aa19.1■□□□□ 0.65
PNKP-202ENST00000593706 MBIPQ9NS73 344 aa19.1■□□□□ 0.65
PNKP-202ENST00000593706 ZNF316A6NFI3 1004 aaPredicted RBP19.09■□□□□ 0.65
PNKP-202ENST00000593706 PSMD14O00487 310 aa19.09■□□□□ 0.65
PNKP-202ENST00000593706 IRS4O14654 1257 aaPredicted RBP19.09■□□□□ 0.65
PNKP-202ENST00000593706 MAP2K2P36507 400 aa19.09■□□□□ 0.65
PNKP-202ENST00000593706 HIRAP54198 1017 aaPredicted RBP19.09■□□□□ 0.65
PNKP-202ENST00000593706 RIC3Q7Z5B4 369 aa19.09■□□□□ 0.65
PNKP-202ENST00000593706 ABHD8Q96I13 439 aa19.09■□□□□ 0.65
PNKP-202ENST00000593706 PGAP2Q9UHJ9 254 aa19.09■□□□□ 0.65
PNKP-202ENST00000593706 TSKSQ9UJT2 592 aa19.09■□□□□ 0.65
PNKP-202ENST00000593706 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
PNKP-202ENST00000593706 GPSM2P81274 684 aa19.08■□□□□ 0.64
PNKP-202ENST00000593706 EYA3Q99504 573 aa19.08■□□□□ 0.64
PNKP-202ENST00000593706 ECE2O60344 883 aa19.07■□□□□ 0.64
PNKP-202ENST00000593706 DPF2Q92785 391 aa19.07■□□□□ 0.64
PNKP-202ENST00000593706 HHIPL1Q96JK4 782 aa19.07■□□□□ 0.64
PNKP-202ENST00000593706 CACNA1FO60840 1977 aa19.06■□□□□ 0.64
PNKP-202ENST00000593706 HSP90B1P14625 803 aaKnown RBP19.06■□□□□ 0.64
PNKP-202ENST00000593706 CALD1Q05682 793 aaKnown RBP19.06■□□□□ 0.64
PNKP-202ENST00000593706 DOK7Q18PE1 504 aa19.06■□□□□ 0.64
PNKP-202ENST00000593706 TBC1D10BQ4KMP7 808 aaPredicted RBP19.06■□□□□ 0.64
PNKP-202ENST00000593706 SAMD7Q7Z3H4 446 aa19.06■□□□□ 0.64
PNKP-202ENST00000593706 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
PNKP-202ENST00000593706 G3V3G9 751 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms