RNA–Protein interactions for RNA: ENST00000593598.5

SNAPC2-202, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

TSL 3

Gene SNAPC2, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-202ENST00000593598 CCDC152Q4G0S7 254 aa17.32■□□□□ 0.36
SNAPC2-202ENST00000593598 CLUAP1Q96AJ1 413 aa17.32■□□□□ 0.36
SNAPC2-202ENST00000593598 USP44Q9H0E7 712 aa17.32■□□□□ 0.36
SNAPC2-202ENST00000593598 SLX4Q8IY92 1834 aa17.32■□□□□ 0.36
SNAPC2-202ENST00000593598 ARFGEF1Q9Y6D6 1849 aa17.32■□□□□ 0.36
SNAPC2-202ENST00000593598 C21orf2O43822 256 aa17.31■□□□□ 0.36
SNAPC2-202ENST00000593598 BBOX1O75936 387 aa17.31■□□□□ 0.36
SNAPC2-202ENST00000593598 GRAPQ13588 217 aa17.31■□□□□ 0.36
SNAPC2-202ENST00000593598 TTLL11Q8NHH1 800 aa17.31■□□□□ 0.36
SNAPC2-202ENST00000593598 GRAPLQ8TC17 118 aaPredicted RBP17.31■□□□□ 0.36
SNAPC2-202ENST00000593598 CSF1RP07333 972 aa17.3■□□□□ 0.36
SNAPC2-202ENST00000593598 ARHGAP27Q6ZUM4 889 aa17.3■□□□□ 0.36
SNAPC2-202ENST00000593598 DZIP1LQ8IYY4 767 aaKnown RBP17.3■□□□□ 0.36
SNAPC2-202ENST00000593598 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
SNAPC2-202ENST00000593598 CCDC85AQ96PX6 553 aaPredicted RBP17.3■□□□□ 0.36
SNAPC2-202ENST00000593598 ZNF219Q9P2Y4 722 aaPredicted RBP17.3■□□□□ 0.36
SNAPC2-202ENST00000593598 GOLGB1Q14789 3259 aaKnown RBP17.29■□□□□ 0.36
SNAPC2-202ENST00000593598 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
SNAPC2-202ENST00000593598 FOXO4P98177 505 aa17.29■□□□□ 0.36
SNAPC2-202ENST00000593598 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
SNAPC2-202ENST00000593598 FTSJ3Q8IY81 847 aaKnown RBP17.29■□□□□ 0.36
SNAPC2-202ENST00000593598 SUCLG2Q96I99 432 aa17.29■□□□□ 0.36
SNAPC2-202ENST00000593598 MYH3P11055 1940 aa17.29■□□□□ 0.36
SNAPC2-202ENST00000593598 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
SNAPC2-202ENST00000593598 MS4A1P11836 297 aa17.28■□□□□ 0.36
SNAPC2-202ENST00000593598 TMEM57Q8N5G2 664 aa17.28■□□□□ 0.36
SNAPC2-202ENST00000593598 CELF1Q92879 486 aaKnown RBP17.28■□□□□ 0.36
SNAPC2-202ENST00000593598 GREM2Q9H772 168 aa17.28■□□□□ 0.36
SNAPC2-202ENST00000593598 SEC31BQ9NQW1 1179 aa17.28■□□□□ 0.36
SNAPC2-202ENST00000593598 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.36
SNAPC2-202ENST00000593598 EPHA10Q5JZY3 1008 aa17.27■□□□□ 0.36
SNAPC2-202ENST00000593598 CC2D2BQ6DHV5 1058 aa17.27■□□□□ 0.36
SNAPC2-202ENST00000593598 TMC4Q7Z404 712 aa17.27■□□□□ 0.36
SNAPC2-202ENST00000593598 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
SNAPC2-202ENST00000593598 KAZALD1Q96I82 304 aa17.27■□□□□ 0.36
SNAPC2-202ENST00000593598 HDAC5Q9UQL6 1122 aa17.27■□□□□ 0.36
SNAPC2-202ENST00000593598 RTL9Q8NET4 1388 aa17.27■□□□□ 0.35
SNAPC2-202ENST00000593598 PLIN1O60240 522 aa17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 UBTFL1P0CB47 393 aaPredicted RBP17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 RLBP1P12271 317 aa17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 CCDC93Q567U6 631 aa17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 LMBR1LQ6UX01 489 aa17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 SP8Q8IXZ3 490 aa17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 TMX4Q9H1E5 349 aaPredicted RBP17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 TAF1P21675 1872 aa17.26■□□□□ 0.35
SNAPC2-202ENST00000593598 GNAI3P08754 354 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 ITGA6P23229 1130 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 GRIPAP1Q4V328 841 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 OLFM4Q6UX06 510 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 ANKRD18AQ8IVF6 992 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 MEIS3Q99687 375 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 BICC1Q9H694 974 aaKnown RBP17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
SNAPC2-202ENST00000593598 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
SNAPC2-202ENST00000593598 FAM161AQ3B820 660 aa17.24■□□□□ 0.35
SNAPC2-202ENST00000593598 RABL6Q3YEC7 729 aaPredicted RBP17.24■□□□□ 0.35
SNAPC2-202ENST00000593598 ITPRIPQ8IWB1 547 aa17.24■□□□□ 0.35
SNAPC2-202ENST00000593598 PANK1Q8TE04 598 aa17.24■□□□□ 0.35
SNAPC2-202ENST00000593598 NFKBIEO00221 500 aa17.23■□□□□ 0.35
SNAPC2-202ENST00000593598 IFIT5Q13325 482 aaKnown RBP17.23■□□□□ 0.35
SNAPC2-202ENST00000593598 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
SNAPC2-202ENST00000593598 ZNF784Q8NCA9 323 aaPredicted RBP17.23■□□□□ 0.35
SNAPC2-202ENST00000593598 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
SNAPC2-202ENST00000593598 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
SNAPC2-202ENST00000593598 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
SNAPC2-202ENST00000593598 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
SNAPC2-202ENST00000593598 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 COL4A1P02462 1669 aa17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 ZBTB7BO15156 539 aaPredicted RBP17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 RASSF7Q02833 373 aa17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 PDE3AQ14432 1141 aa17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 SLC51AQ86UW1 340 aa17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 BSDC1Q9NW68 430 aaPredicted RBP17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
SNAPC2-202ENST00000593598 SNED1Q8TER0 1413 aa17.21■□□□□ 0.34
SNAPC2-202ENST00000593598 MPNDQ8N594 471 aa17.2■□□□□ 0.34
SNAPC2-202ENST00000593598 PSMD1Q99460 953 aa17.2■□□□□ 0.34
SNAPC2-202ENST00000593598 MPHOSPH8Q99549 860 aa17.2■□□□□ 0.34
SNAPC2-202ENST00000593598 GNAI2P04899 355 aa17.19■□□□□ 0.34
SNAPC2-202ENST00000593598 LMNB1P20700 586 aa17.19■□□□□ 0.34
SNAPC2-202ENST00000593598 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
SNAPC2-202ENST00000593598 TAF7LQ5H9L4 462 aa17.19■□□□□ 0.34
SNAPC2-202ENST00000593598 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
SNAPC2-202ENST00000593598 PRELPP51888 382 aa17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 RRP1P56182 461 aaKnown RBP17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 C20orf194Q5TEA3 1177 aa17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 RTFDC1Q9BY42 306 aaPredicted RBP17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 DDX19BQ9UMR2 479 aa17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 SBF1O95248 1867 aa17.18■□□□□ 0.34
SNAPC2-202ENST00000593598 GPSM2P81274 684 aa17.17■□□□□ 0.34
SNAPC2-202ENST00000593598 SUPT20HQ8NEM7 779 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms