RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GTF2E1P29083 439 aaPredicted RBP17.2■□□□□ 0.34
H3F3B-213ENST00000593254 GRM1Q13255 1194 aa17.2■□□□□ 0.34
H3F3B-213ENST00000593254 SAPCD2Q86UD0 394 aa17.2■□□□□ 0.34
H3F3B-213ENST00000593254 CA12O43570 354 aa17.19■□□□□ 0.34
H3F3B-213ENST00000593254 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
H3F3B-213ENST00000593254 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
H3F3B-213ENST00000593254 LARGE2Q8N3Y3 721 aa17.19■□□□□ 0.34
H3F3B-213ENST00000593254 NECTIN2Q92692 538 aa17.19■□□□□ 0.34
H3F3B-213ENST00000593254 MCOLN1Q9GZU1 580 aa17.19■□□□□ 0.34
H3F3B-213ENST00000593254 ZNF316A6NFI3 1004 aaPredicted RBP17.18■□□□□ 0.34
H3F3B-213ENST00000593254 NTSR2O95665 410 aa17.18■□□□□ 0.34
H3F3B-213ENST00000593254 ZNF853P0CG23 659 aa17.18■□□□□ 0.34
H3F3B-213ENST00000593254 CCDC184Q52MB2 194 aa17.18■□□□□ 0.34
H3F3B-213ENST00000593254 SUSD4Q5VX71 490 aa17.18■□□□□ 0.34
H3F3B-213ENST00000593254 HHIPL1Q96JK4 782 aa17.18■□□□□ 0.34
H3F3B-213ENST00000593254 BRPF1P55201 1214 aaPredicted RBP17.17■□□□□ 0.34
H3F3B-213ENST00000593254 PARP10Q53GL7 1025 aa17.17■□□□□ 0.34
H3F3B-213ENST00000593254 COPS6Q7L5N1 327 aa17.17■□□□□ 0.34
H3F3B-213ENST00000593254 XAGE3Q8WTP9 111 aa17.17■□□□□ 0.34
H3F3B-213ENST00000593254 ADARB2Q9NS39 739 aaKnown RBP17.17■□□□□ 0.34
H3F3B-213ENST00000593254 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
H3F3B-213ENST00000593254 GPRC5DQ9NZD1 345 aa17.17■□□□□ 0.34
H3F3B-213ENST00000593254 HDGFL1Q5TGJ6 251 aa17.16■□□□□ 0.34
H3F3B-213ENST00000593254 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
H3F3B-213ENST00000593254 CRAMP1Q96RY5 1269 aa17.16■□□□□ 0.34
H3F3B-213ENST00000593254 IFT57Q9NWB7 429 aa17.16■□□□□ 0.34
H3F3B-213ENST00000593254 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
H3F3B-213ENST00000593254 PGAP2Q9UHJ9 254 aa17.16■□□□□ 0.34
H3F3B-213ENST00000593254 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
H3F3B-213ENST00000593254 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
H3F3B-213ENST00000593254 AIMP1Q12904 312 aaKnown RBP17.15■□□□□ 0.34
H3F3B-213ENST00000593254 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
H3F3B-213ENST00000593254 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
H3F3B-213ENST00000593254 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
H3F3B-213ENST00000593254 LAMB2P55268 1798 aa17.15■□□□□ 0.34
H3F3B-213ENST00000593254 PPEF1O14829 653 aaPredicted RBP17.14■□□□□ 0.33
H3F3B-213ENST00000593254 GNAI1P63096 354 aa17.14■□□□□ 0.33
H3F3B-213ENST00000593254 HSP90AB3PQ58FF7 597 aa17.14■□□□□ 0.33
H3F3B-213ENST00000593254 RBM17Q96I25 401 aaKnown RBP17.14■□□□□ 0.33
H3F3B-213ENST00000593254 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
H3F3B-213ENST00000593254 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
H3F3B-213ENST00000593254 PPIP5K2O43314 1243 aa17.13■□□□□ 0.33
H3F3B-213ENST00000593254 UTP14AQ9BVJ6 771 aaKnown RBP17.13■□□□□ 0.33
H3F3B-213ENST00000593254 GLIS2Q9BZE0 524 aaPredicted RBP17.13■□□□□ 0.33
H3F3B-213ENST00000593254 CXCL9Q07325 125 aa17.12■□□□□ 0.33
H3F3B-213ENST00000593254 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
H3F3B-213ENST00000593254 AOC3Q16853 763 aa17.12■□□□□ 0.33
H3F3B-213ENST00000593254 SLC10A5Q5PT55 438 aa17.12■□□□□ 0.33
H3F3B-213ENST00000593254 C3orf67Q6ZVT6 689 aa17.12■□□□□ 0.33
H3F3B-213ENST00000593254 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
H3F3B-213ENST00000593254 DGKZQ13574 1117 aa17.11■□□□□ 0.33
H3F3B-213ENST00000593254 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
H3F3B-213ENST00000593254 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
H3F3B-213ENST00000593254 ZC3H15Q8WU90 426 aaKnown RBP17.11■□□□□ 0.33
H3F3B-213ENST00000593254 RTFDC1Q9BY42 306 aaPredicted RBP17.11■□□□□ 0.33
H3F3B-213ENST00000593254 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
H3F3B-213ENST00000593254 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
H3F3B-213ENST00000593254 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
H3F3B-213ENST00000593254 TCERG1O14776 1098 aaKnown RBP17.1■□□□□ 0.33
H3F3B-213ENST00000593254 ANP32CO43423 234 aa17.1■□□□□ 0.33
H3F3B-213ENST00000593254 GMPSP49915 693 aaPredicted RBP17.1■□□□□ 0.33
H3F3B-213ENST00000593254 HIRAP54198 1017 aaPredicted RBP17.1■□□□□ 0.33
H3F3B-213ENST00000593254 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
H3F3B-213ENST00000593254 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
H3F3B-213ENST00000593254 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
H3F3B-213ENST00000593254 ANKRD13DQ6ZTN6 518 aa17.09■□□□□ 0.33
H3F3B-213ENST00000593254 ZIC5Q96T25 663 aa17.09■□□□□ 0.33
H3F3B-213ENST00000593254 MRS2Q9HD23 443 aa17.09■□□□□ 0.33
H3F3B-213ENST00000593254 DDX60Q8IY21 1712 aaKnown RBP17.09■□□□□ 0.33
H3F3B-213ENST00000593254 NOGQ13253 232 aa17.08■□□□□ 0.32
H3F3B-213ENST00000593254 TRMT112Q9UI30 125 aaKnown RBP17.08■□□□□ 0.32
H3F3B-213ENST00000593254 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
H3F3B-213ENST00000593254 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 TRPM4Q8TD43 1214 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 POLR2AP24928 1970 aaKnown RBP17.07■□□□□ 0.32
H3F3B-213ENST00000593254 TAF1P21675 1872 aa17.07■□□□□ 0.32
H3F3B-213ENST00000593254 ABCC4O15439 1325 aa17.06■□□□□ 0.32
H3F3B-213ENST00000593254 KIAA2012Q0VF49 1180 aa17.06■□□□□ 0.32
H3F3B-213ENST00000593254 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
H3F3B-213ENST00000593254 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
H3F3B-213ENST00000593254 TMX4Q9H1E5 349 aaPredicted RBP17.05■□□□□ 0.32
H3F3B-213ENST00000593254 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
H3F3B-213ENST00000593254 FAM155AB1AL88 458 aaPredicted RBP17.04■□□□□ 0.32
H3F3B-213ENST00000593254 HUNKP57058 714 aa17.04■□□□□ 0.32
H3F3B-213ENST00000593254 TRIM28Q13263 835 aaKnown RBP17.04■□□□□ 0.32
H3F3B-213ENST00000593254 TNIP1Q15025 636 aa17.04■□□□□ 0.32
H3F3B-213ENST00000593254 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
H3F3B-213ENST00000593254 SP8Q8IXZ3 490 aa17.04■□□□□ 0.32
H3F3B-213ENST00000593254 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
H3F3B-213ENST00000593254 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
H3F3B-213ENST00000593254 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
H3F3B-213ENST00000593254 CHMP4AQ9BY43 222 aa17.04■□□□□ 0.32
H3F3B-213ENST00000593254 SAGE1Q9NXZ1 904 aa17.04■□□□□ 0.32
H3F3B-213ENST00000593254 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
H3F3B-213ENST00000593254 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms