RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SVOPQ8N4V2 548 aa8.77□□□□□ -1.01
SMAD4-216ENST00000593223 TMC1Q8TDI8 760 aa8.77□□□□□ -1.01
SMAD4-216ENST00000593223 EGFRP00533 1210 aa8.76□□□□□ -1.01
SMAD4-216ENST00000593223 BCRP11274 1271 aa8.76□□□□□ -1.01
SMAD4-216ENST00000593223 ECM1Q16610 540 aa8.76□□□□□ -1.01
SMAD4-216ENST00000593223 LYPD4Q6UWN0 246 aa8.76□□□□□ -1.01
SMAD4-216ENST00000593223 ZNF438Q7Z4V0 828 aa8.76□□□□□ -1.01
SMAD4-216ENST00000593223 NLRP13Q86W25 1043 aa8.76□□□□□ -1.01
SMAD4-216ENST00000593223 ZSCAN1Q8NBB4 408 aa8.76□□□□□ -1.01
SMAD4-216ENST00000593223 UBE2OQ9C0C9 1292 aaKnown RBP8.76□□□□□ -1.01
SMAD4-216ENST00000593223 SIN3BO75182 1162 aa8.75□□□□□ -1.01
SMAD4-216ENST00000593223 CELA2BP08218 269 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-216ENST00000593223 SLCO4C1Q6ZQN7 724 aa8.75□□□□□ -1.01
SMAD4-216ENST00000593223 GALNT6Q8NCL4 622 aa8.75□□□□□ -1.01
SMAD4-216ENST00000593223 WHAMMQ8TF30 809 aa8.75□□□□□ -1.01
SMAD4-216ENST00000593223 GZF1Q9H116 711 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-216ENST00000593223 ZFATQ9P243 1243 aa8.75□□□□□ -1.01
SMAD4-216ENST00000593223 A6NHS1 94 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 ALAS2P22557 587 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 AMPD1P23109 780 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 TTC39BQ5VTQ0 682 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-216ENST00000593223 FCHSD1Q86WN1 690 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 EDARADDQ8WWZ3 215 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 GGNBP2Q9H3C7 697 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 ENAMQ9NRM1 1142 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 KLF15Q9UIH9 416 aa8.74□□□□□ -1.01
SMAD4-216ENST00000593223 OIP5O43482 229 aa8.73□□□□□ -1.01
SMAD4-216ENST00000593223 PSAPP07602 524 aa8.73□□□□□ -1.01
SMAD4-216ENST00000593223 MAPK1P28482 360 aa8.73□□□□□ -1.01
SMAD4-216ENST00000593223 EHHADHQ08426 723 aa8.73□□□□□ -1.01
SMAD4-216ENST00000593223 ZNF385CQ66K41 422 aaPredicted RBP8.73□□□□□ -1.01
SMAD4-216ENST00000593223 PDE12Q6L8Q7 609 aaKnown RBP8.73□□□□□ -1.01
SMAD4-216ENST00000593223 NEDD1Q8NHV4 660 aa8.73□□□□□ -1.01
SMAD4-216ENST00000593223 ELP3Q9H9T3 547 aa8.73□□□□□ -1.01
SMAD4-216ENST00000593223 MMP20O60882 483 aa8.72□□□□□ -1.01
SMAD4-216ENST00000593223 MAP3K6O95382 1288 aa8.72□□□□□ -1.01
SMAD4-216ENST00000593223 EPXP11678 715 aa8.72□□□□□ -1.01
SMAD4-216ENST00000593223 SND1Q7KZF4 910 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMAD4-216ENST00000593223 DHX32Q7L7V1 743 aaKnown RBP8.72□□□□□ -1.01
SMAD4-216ENST00000593223 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
SMAD4-216ENST00000593223 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-216ENST00000593223 ELOA3DA6NLF2 546 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-216ENST00000593223 ADH7P40394 386 aa8.71□□□□□ -1.02
SMAD4-216ENST00000593223 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
SMAD4-216ENST00000593223 PCSK7Q16549 785 aa8.71□□□□□ -1.02
SMAD4-216ENST00000593223 ELOA3BQ3SY89 546 aa8.71□□□□□ -1.02
SMAD4-216ENST00000593223 ELOA3Q8NG57 546 aa8.71□□□□□ -1.02
SMAD4-216ENST00000593223 TNFRSF25Q93038 417 aa8.71□□□□□ -1.02
SMAD4-216ENST00000593223 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
SMAD4-216ENST00000593223 ABI2Q9NYB9 513 aaPredicted RBP8.71□□□□□ -1.02
SMAD4-216ENST00000593223 TLR7Q9NYK1 1049 aaKnown RBP8.71□□□□□ -1.02
SMAD4-216ENST00000593223 MLLT1Q03111 559 aaPredicted RBP8.7□□□□□ -1.02
SMAD4-216ENST00000593223 PLAURQ03405 335 aa8.7□□□□□ -1.02
SMAD4-216ENST00000593223 C1orf229Q6ZS94 237 aaPredicted RBP8.7□□□□□ -1.02
SMAD4-216ENST00000593223 GJD3Q8N144 294 aa8.7□□□□□ -1.02
SMAD4-216ENST00000593223 CITED4Q96RK1 184 aa8.7□□□□□ -1.02
SMAD4-216ENST00000593223 LRRC4BQ9NT99 713 aa8.7□□□□□ -1.02
SMAD4-216ENST00000593223 TMEM63CQ9P1W3 806 aa8.7□□□□□ -1.02
SMAD4-216ENST00000593223 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
SMAD4-216ENST00000593223 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
SMAD4-216ENST00000593223 PHF20L1A8MW92 1017 aa8.69□□□□□ -1.02
SMAD4-216ENST00000593223 MARSP56192 900 aaKnown RBP8.69□□□□□ -1.02
SMAD4-216ENST00000593223 RRAGCQ9HB90 399 aa8.69□□□□□ -1.02
SMAD4-216ENST00000593223 SHISA8B8ZZ34 492 aa8.68□□□□□ -1.02
SMAD4-216ENST00000593223 XKR5Q6UX68 686 aa8.68□□□□□ -1.02
SMAD4-216ENST00000593223 NSUN5Q96P11 429 aaKnown RBP8.68□□□□□ -1.02
SMAD4-216ENST00000593223 RBCK1Q9BYM8 510 aa8.68□□□□□ -1.02
SMAD4-216ENST00000593223 SLC6A14Q9UN76 642 aa8.68□□□□□ -1.02
SMAD4-216ENST00000593223 PHACTR2O75167 634 aa8.67□□□□□ -1.02
SMAD4-216ENST00000593223 NRLP54845 237 aa8.67□□□□□ -1.02
SMAD4-216ENST00000593223 HFE2Q6ZVN8 426 aa8.67□□□□□ -1.02
SMAD4-216ENST00000593223 FAM35AQ86V20 835 aa8.67□□□□□ -1.02
SMAD4-216ENST00000593223 ZSCAN29Q8IWY8 852 aaPredicted RBP8.67□□□□□ -1.02
SMAD4-216ENST00000593223 OR13H1Q8NG92 308 aa8.67□□□□□ -1.02
SMAD4-216ENST00000593223 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
SMAD4-216ENST00000593223 BTBD6Q96KE9 485 aa8.67□□□□□ -1.02
SMAD4-216ENST00000593223 TNFRSF21O75509 655 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 NEFLP07196 543 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 CPB1P15086 417 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 CES1P23141 567 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 SOX18P35713 384 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 GPLD1P80108 840 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
SMAD4-216ENST00000593223 CHSY3Q70JA7 882 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 C1orf127Q8N9H9 656 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 TRPM4Q8TD43 1214 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 DMRTB1Q96MA1 342 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
SMAD4-216ENST00000593223 FOXD3Q9UJU5 478 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-216ENST00000593223 LOC102724428A0A0B4J2F2 783 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 ZBTB42B2RXF5 422 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 ARHGEF15O94989 841 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 GHRHP01286 108 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 CYP2E1P05181 493 aaPredicted RBP8.65□□□□□ -1.02
SMAD4-216ENST00000593223 EIF2AK2P19525 551 aaKnown RBP8.65□□□□□ -1.02
SMAD4-216ENST00000593223 SIK1P57059 783 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 HYAL2Q12891 473 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 TMC7Q7Z402 723 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 NCAPG2Q86XI2 1143 aa8.65□□□□□ -1.02
SMAD4-216ENST00000593223 PMEPA1Q969W9 287 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms