RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 CASTP20810 708 aaKnown RBP23.69■■□□□ 1.38
CLIP3-206ENST00000593074 AK2P54819 239 aa23.69■■□□□ 1.38
CLIP3-206ENST00000593074 MCTP1Q6DN14 999 aa23.69■■□□□ 1.38
CLIP3-206ENST00000593074 GIGYF2Q6Y7W6 1299 aaKnown RBP23.69■■□□□ 1.38
CLIP3-206ENST00000593074 MARCH10Q8NA82 808 aaPredicted RBP23.69■■□□□ 1.38
CLIP3-206ENST00000593074 IL15P40933 162 aaPredicted RBP23.68■■□□□ 1.38
CLIP3-206ENST00000593074 HAUS7Q99871 368 aa23.68■■□□□ 1.38
CLIP3-206ENST00000593074 ZSWIM6Q9HCJ5 1215 aa23.68■■□□□ 1.38
CLIP3-206ENST00000593074 LIMCH1Q9UPQ0 1083 aa23.68■■□□□ 1.38
CLIP3-206ENST00000593074 ZNF609O15014 1411 aa23.67■■□□□ 1.38
CLIP3-206ENST00000593074 KAT6BQ8WYB5 2073 aa23.67■■□□□ 1.38
CLIP3-206ENST00000593074 CIAO1O76071 339 aa23.67■■□□□ 1.38
CLIP3-206ENST00000593074 CREB3L3Q68CJ9 461 aa23.67■■□□□ 1.38
CLIP3-206ENST00000593074 RUFY3Q7L099 469 aa23.67■■□□□ 1.38
CLIP3-206ENST00000593074 EDC3Q96F86 508 aaKnown RBP23.67■■□□□ 1.38
CLIP3-206ENST00000593074 RPAP1Q9BWH6 1393 aaPredicted RBP23.67■■□□□ 1.38
CLIP3-206ENST00000593074 PCCAP05165 728 aaPredicted RBP23.66■■□□□ 1.38
CLIP3-206ENST00000593074 ZKSCAN1P17029 563 aaPredicted RBP23.66■■□□□ 1.38
CLIP3-206ENST00000593074 ADCK5Q3MIX3 580 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 HSP90AB3PQ58FF7 597 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 VPS53Q5VIR6 699 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 LMBRD1Q9NUN5 540 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 ZBTB1Q9Y2K1 713 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 A0A0G2JS52 829 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 EYA2O00167 538 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 ACSBG1Q96GR2 724 aa23.66■■□□□ 1.38
CLIP3-206ENST00000593074 JAKMIP1Q96N16 626 aaKnown RBP23.66■■□□□ 1.38
CLIP3-206ENST00000593074 DOT1LQ8TEK3 1739 aa23.65■■□□□ 1.38
CLIP3-206ENST00000593074 IL6STP40189 918 aaPredicted RBP23.64■■□□□ 1.38
CLIP3-206ENST00000593074 HLFQ16534 295 aa23.64■■□□□ 1.38
CLIP3-206ENST00000593074 ZNF589Q86UQ0 364 aaPredicted RBP23.64■■□□□ 1.38
CLIP3-206ENST00000593074 ZBTB38Q8NAP3 1195 aaPredicted RBP23.64■■□□□ 1.38
CLIP3-206ENST00000593074 PLA2G12BQ9BX93 195 aa23.64■■□□□ 1.38
CLIP3-206ENST00000593074 DDX49Q9Y6V7 483 aaKnown RBP23.64■■□□□ 1.38
CLIP3-206ENST00000593074 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.38
CLIP3-206ENST00000593074 ANKRD36CQ5JPF3 1778 aa23.64■■□□□ 1.37
CLIP3-206ENST00000593074 CYP46A1Q9Y6A2 500 aa23.64■■□□□ 1.37
CLIP3-206ENST00000593074 SLC27A2O14975 620 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 FAM89AQ96GI7 184 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 PALLDQ8WX93 1383 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 CPA1P15085 419 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 KCNJ4P48050 445 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 LRRC24Q50LG9 513 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 NGLY1Q96IV0 654 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 PDRG1Q9NUG6 133 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 FBXO3Q9UK99 471 aa23.63■■□□□ 1.37
CLIP3-206ENST00000593074 XRCC6P12956 609 aaKnown RBP eCLIP23.62■■□□□ 1.37
CLIP3-206ENST00000593074 RNF20Q5VTR2 975 aa23.62■■□□□ 1.37
CLIP3-206ENST00000593074 TICAM2Q86XR7 235 aa23.62■■□□□ 1.37
CLIP3-206ENST00000593074 ZNF594Q96JF6 807 aaPredicted RBP23.62■■□□□ 1.37
CLIP3-206ENST00000593074 DNAJC2Q99543 621 aaKnown RBP23.62■■□□□ 1.37
CLIP3-206ENST00000593074 SPEF2Q9C093 1822 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 ERVV-1B6SEH8 477 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 TAF5LO75529 589 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 MRE11P49959 708 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 CCDC57Q2TAC2 916 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 NLRP10Q86W26 655 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 GPTP24298 496 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 USPL1Q5W0Q7 1092 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 DZIP3Q86Y13 1208 aaKnown RBP23.61■■□□□ 1.37
CLIP3-206ENST00000593074 KBTBD3Q8NAB2 608 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 HMG20BQ9P0W2 317 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 NDUFB9Q9Y6M9 179 aa23.61■■□□□ 1.37
CLIP3-206ENST00000593074 CDHR2Q9BYE9 1310 aa23.6■■□□□ 1.37
CLIP3-206ENST00000593074 ATP6V1AP38606 617 aa23.6■■□□□ 1.37
CLIP3-206ENST00000593074 TSGA10IPQ3SY00 556 aa23.6■■□□□ 1.37
CLIP3-206ENST00000593074 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
CLIP3-206ENST00000593074 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.6■■□□□ 1.37
CLIP3-206ENST00000593074 PSMA5P28066 241 aa23.6■■□□□ 1.37
CLIP3-206ENST00000593074 ZSCAN31Q96LW9 406 aaPredicted RBP23.6■■□□□ 1.37
CLIP3-206ENST00000593074 SH2B1Q9NRF2 756 aaPredicted RBP23.6■■□□□ 1.37
CLIP3-206ENST00000593074 TBC1D2BQ9UPU7 963 aa23.6■■□□□ 1.37
CLIP3-206ENST00000593074 WDR33Q9C0J8 1336 aaKnown RBP23.59■■□□□ 1.37
CLIP3-206ENST00000593074 CSF1RP07333 972 aa23.59■■□□□ 1.37
CLIP3-206ENST00000593074 NEUROD6Q96NK8 337 aa23.59■■□□□ 1.37
CLIP3-206ENST00000593074 SH3TC1Q8TE82 1336 aa23.59■■□□□ 1.37
CLIP3-206ENST00000593074 LOC102724428A0A0B4J2F2 783 aa23.58■■□□□ 1.37
CLIP3-206ENST00000593074 SIK1P57059 783 aa23.58■■□□□ 1.37
CLIP3-206ENST00000593074 TIMM10P62072 90 aa23.58■■□□□ 1.37
CLIP3-206ENST00000593074 VPS72Q15906 364 aa23.58■■□□□ 1.37
CLIP3-206ENST00000593074 DDX46Q7L014 1031 aaKnown RBP23.58■■□□□ 1.37
CLIP3-206ENST00000593074 PUS3Q9BZE2 481 aaKnown RBP23.58■■□□□ 1.37
CLIP3-206ENST00000593074 CCDC87Q9NVE4 849 aa23.58■■□□□ 1.37
CLIP3-206ENST00000593074 LARGE1O95461 756 aa23.58■■□□□ 1.36
CLIP3-206ENST00000593074 FAM98CQ17RN3 349 aaKnown RBP23.58■■□□□ 1.36
CLIP3-206ENST00000593074 INTS5Q6P9B9 1019 aaKnown RBP23.58■■□□□ 1.36
CLIP3-206ENST00000593074 GRPEL1Q9HAV7 217 aa23.58■■□□□ 1.36
CLIP3-206ENST00000593074 A0A1B0GUL7 405 aa23.57■■□□□ 1.36
CLIP3-206ENST00000593074 EIF5P55010 431 aaKnown RBP23.57■■□□□ 1.36
CLIP3-206ENST00000593074 FOXD4L5Q5VV16 416 aaPredicted RBP23.57■■□□□ 1.36
CLIP3-206ENST00000593074 FOXD4L4Q8WXT5 416 aaPredicted RBP23.57■■□□□ 1.36
CLIP3-206ENST00000593074 PAG1Q9NWQ8 432 aa23.57■■□□□ 1.36
CLIP3-206ENST00000593074 PRPF40AO75400 957 aaKnown RBP23.56■■□□□ 1.36
CLIP3-206ENST00000593074 MCMDC2Q4G0Z9 681 aa23.56■■□□□ 1.36
CLIP3-206ENST00000593074 SMARCC1Q92922 1105 aaPredicted RBP23.56■■□□□ 1.36
CLIP3-206ENST00000593074 LARP6Q9BRS8 491 aaKnown RBP23.56■■□□□ 1.36
CLIP3-206ENST00000593074 ALDH8A1Q9H2A2 487 aaPredicted RBP23.56■■□□□ 1.36
CLIP3-206ENST00000593074 GAS2L3Q86XJ1 694 aa23.56■■□□□ 1.36
CLIP3-206ENST00000593074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.56■■□□□ 1.36
CLIP3-206ENST00000593074 CEP126Q9P2H0 1117 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 551.6 ms