RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 DDX46Q7L014 1031 aaKnown RBP18.83■□□□□ 0.6
DDX39A-221ENST00000593026 PLA2G12BQ9BX93 195 aa18.83■□□□□ 0.6
DDX39A-221ENST00000593026 SLX4Q8IY92 1834 aa18.83■□□□□ 0.6
DDX39A-221ENST00000593026 UTYO14607 1347 aa18.82■□□□□ 0.6
DDX39A-221ENST00000593026 NBPF7P0C2Y1 421 aaPredicted RBP18.82■□□□□ 0.6
DDX39A-221ENST00000593026 DZIP1LQ8IYY4 767 aaKnown RBP18.81■□□□□ 0.6
DDX39A-221ENST00000593026 USP44Q9H0E7 712 aa18.81■□□□□ 0.6
DDX39A-221ENST00000593026 ZNF219Q9P2Y4 722 aaPredicted RBP18.81■□□□□ 0.6
DDX39A-221ENST00000593026 C21orf2O43822 256 aa18.8■□□□□ 0.6
DDX39A-221ENST00000593026 GRAPQ13588 217 aa18.8■□□□□ 0.6
DDX39A-221ENST00000593026 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-221ENST00000593026 TTLL11Q8NHH1 800 aa18.8■□□□□ 0.6
DDX39A-221ENST00000593026 GRAPLQ8TC17 118 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-221ENST00000593026 CCDC85AQ96PX6 553 aaPredicted RBP18.8■□□□□ 0.6
DDX39A-221ENST00000593026 PPEF1O14829 653 aaPredicted RBP18.79■□□□□ 0.6
DDX39A-221ENST00000593026 MS4A1P11836 297 aa18.79■□□□□ 0.6
DDX39A-221ENST00000593026 FOXO4P98177 505 aa18.79■□□□□ 0.6
DDX39A-221ENST00000593026 TMEM57Q8N5G2 664 aa18.79■□□□□ 0.6
DDX39A-221ENST00000593026 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
DDX39A-221ENST00000593026 GOLGB1Q14789 3259 aaKnown RBP18.78■□□□□ 0.6
DDX39A-221ENST00000593026 PLIN1O60240 522 aa18.78■□□□□ 0.6
DDX39A-221ENST00000593026 BBOX1O75936 387 aa18.78■□□□□ 0.6
DDX39A-221ENST00000593026 UBTFL1P0CB47 393 aaPredicted RBP18.78■□□□□ 0.6
DDX39A-221ENST00000593026 RLBP1P12271 317 aa18.78■□□□□ 0.6
DDX39A-221ENST00000593026 SOGA3Q5TF21 947 aa18.78■□□□□ 0.6
DDX39A-221ENST00000593026 C7orf43Q8WVR3 580 aa18.78■□□□□ 0.6
DDX39A-221ENST00000593026 SEC31BQ9NQW1 1179 aa18.78■□□□□ 0.6
DDX39A-221ENST00000593026 RTL9Q8NET4 1388 aa18.78■□□□□ 0.6
DDX39A-221ENST00000593026 TAF1P21675 1872 aa18.77■□□□□ 0.6
DDX39A-221ENST00000593026 CSF1RP07333 972 aa18.77■□□□□ 0.6
DDX39A-221ENST00000593026 EPHA10Q5JZY3 1008 aa18.77■□□□□ 0.6
DDX39A-221ENST00000593026 ARHGAP27Q6ZUM4 889 aa18.77■□□□□ 0.6
DDX39A-221ENST00000593026 ITPRIPQ8IWB1 547 aa18.77■□□□□ 0.6
DDX39A-221ENST00000593026 CELF1Q92879 486 aaKnown RBP18.77■□□□□ 0.6
DDX39A-221ENST00000593026 MEIS3Q99687 375 aa18.77■□□□□ 0.6
DDX39A-221ENST00000593026 GREM2Q9H772 168 aa18.77■□□□□ 0.6
DDX39A-221ENST00000593026 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 CCDC93Q567U6 631 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 LMBR1LQ6UX01 489 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 PANK1Q8TE04 598 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 CDC5LQ99459 802 aaKnown RBP18.76■□□□□ 0.59
DDX39A-221ENST00000593026 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-221ENST00000593026 BICC1Q9H694 974 aaKnown RBP18.76■□□□□ 0.59
DDX39A-221ENST00000593026 HDAC5Q9UQL6 1122 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 CHMP3Q9Y3E7 222 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 COL4A1P02462 1669 aa18.76■□□□□ 0.59
DDX39A-221ENST00000593026 GNAI3P08754 354 aa18.75■□□□□ 0.59
DDX39A-221ENST00000593026 RPS8P62241 208 aaKnown RBP18.75■□□□□ 0.59
DDX39A-221ENST00000593026 TMC4Q7Z404 712 aa18.75■□□□□ 0.59
DDX39A-221ENST00000593026 ATP6V0A2Q9Y487 856 aa18.75■□□□□ 0.59
DDX39A-221ENST00000593026 ITGA6P23229 1130 aa18.74■□□□□ 0.59
DDX39A-221ENST00000593026 CC2D2BQ6DHV5 1058 aa18.74■□□□□ 0.59
DDX39A-221ENST00000593026 OLFM4Q6UX06 510 aa18.74■□□□□ 0.59
DDX39A-221ENST00000593026 ANKRD18AQ8IVF6 992 aa18.74■□□□□ 0.59
DDX39A-221ENST00000593026 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
DDX39A-221ENST00000593026 IFIT5Q13325 482 aaKnown RBP18.73■□□□□ 0.59
DDX39A-221ENST00000593026 RABL6Q3YEC7 729 aaPredicted RBP18.73■□□□□ 0.59
DDX39A-221ENST00000593026 RTKN2Q8IZC4 609 aa18.73■□□□□ 0.59
DDX39A-221ENST00000593026 ANKRD44Q8N8A2 993 aa18.73■□□□□ 0.59
DDX39A-221ENST00000593026 LRRC37AA6NMS7 1700 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 FER1L6Q2WGJ9 1857 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 NFKBIEO00221 500 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 PDE3AQ14432 1141 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 CCDC57Q2TAC2 916 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 GRIPAP1Q4V328 841 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 SLC51AQ86UW1 340 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 SP8Q8IXZ3 490 aa18.72■□□□□ 0.59
DDX39A-221ENST00000593026 LRRFIP2Q9Y608 721 aaKnown RBP18.72■□□□□ 0.59
DDX39A-221ENST00000593026 IGHMBP2P38935 993 aaKnown RBP18.71■□□□□ 0.59
DDX39A-221ENST00000593026 RRP1P56182 461 aaKnown RBP18.71■□□□□ 0.59
DDX39A-221ENST00000593026 RASSF7Q02833 373 aa18.71■□□□□ 0.59
DDX39A-221ENST00000593026 MVPQ14764 893 aaKnown RBP18.71■□□□□ 0.59
DDX39A-221ENST00000593026 TAOK3Q9H2K8 898 aa18.71■□□□□ 0.59
DDX39A-221ENST00000593026 SPEF2Q9C093 1822 aa18.71■□□□□ 0.59
DDX39A-221ENST00000593026 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
DDX39A-221ENST00000593026 SNED1Q8TER0 1413 aa18.7■□□□□ 0.58
DDX39A-221ENST00000593026 COG6Q9Y2V7 657 aa18.7■□□□□ 0.58
DDX39A-221ENST00000593026 LTBP3Q9NS15 1303 aa18.7■□□□□ 0.58
DDX39A-221ENST00000593026 UTRNP46939 3433 aa18.69■□□□□ 0.58
DDX39A-221ENST00000593026 GNAI2P04899 355 aa18.69■□□□□ 0.58
DDX39A-221ENST00000593026 FKBP4Q02790 459 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX39A-221ENST00000593026 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
DDX39A-221ENST00000593026 MPHOSPH8Q99549 860 aa18.69■□□□□ 0.58
DDX39A-221ENST00000593026 BSDC1Q9NW68 430 aaPredicted RBP18.69■□□□□ 0.58
DDX39A-221ENST00000593026 CHD4Q14839 1912 aa18.68■□□□□ 0.58
DDX39A-221ENST00000593026 ZBTB7BO15156 539 aaPredicted RBP18.68■□□□□ 0.58
DDX39A-221ENST00000593026 DPP8Q6V1X1 898 aaPredicted RBP18.68■□□□□ 0.58
DDX39A-221ENST00000593026 DDX19BQ9UMR2 479 aa18.68■□□□□ 0.58
DDX39A-221ENST00000593026 MPNDQ8N594 471 aa18.67■□□□□ 0.58
DDX39A-221ENST00000593026 ZNF594Q96JF6 807 aaPredicted RBP18.67■□□□□ 0.58
DDX39A-221ENST00000593026 PSMD1Q99460 953 aa18.67■□□□□ 0.58
DDX39A-221ENST00000593026 NSFL1CQ9UNZ2 370 aaKnown RBP18.67■□□□□ 0.58
DDX39A-221ENST00000593026 LMNB1P20700 586 aa18.66■□□□□ 0.58
DDX39A-221ENST00000593026 GPSM2P81274 684 aa18.66■□□□□ 0.58
DDX39A-221ENST00000593026 ZNF784Q8NCA9 323 aaPredicted RBP18.66■□□□□ 0.58
DDX39A-221ENST00000593026 ANKIB1Q9P2G1 1089 aa18.66■□□□□ 0.58
DDX39A-221ENST00000593026 SBF1O95248 1867 aa18.66■□□□□ 0.58
DDX39A-221ENST00000593026 C9orf131Q5VYM1 1079 aa18.65■□□□□ 0.58
DDX39A-221ENST00000593026 LDHAL6AQ6ZMR3 332 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms