RNA–Protein interactions for RNA: ENST00000592954.1

APOC4-202, Transcript of apolipoprotein C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC4, Length 615 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-202ENST00000592954 CHMP4AQ9BY43 222 aa17.38■□□□□ 0.37
APOC4-202ENST00000592954 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
APOC4-202ENST00000592954 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
APOC4-202ENST00000592954 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
APOC4-202ENST00000592954 COL13A1Q5TAT6 717 aaPredicted RBP17.37■□□□□ 0.37
APOC4-202ENST00000592954 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
APOC4-202ENST00000592954 DDX58O95786 925 aaKnown RBP17.36■□□□□ 0.37
APOC4-202ENST00000592954 TRIM28Q13263 835 aaKnown RBP17.36■□□□□ 0.37
APOC4-202ENST00000592954 PNMA8AQ86V59 439 aaPredicted RBP17.36■□□□□ 0.37
APOC4-202ENST00000592954 COL4A5P29400 1685 aa17.36■□□□□ 0.37
APOC4-202ENST00000592954 SCN4AP35499 1836 aa17.35■□□□□ 0.37
APOC4-202ENST00000592954 CCDC27Q2M243 656 aa17.35■□□□□ 0.37
APOC4-202ENST00000592954 VPS33BQ9H267 617 aa17.35■□□□□ 0.37
APOC4-202ENST00000592954 LAMB2P55268 1798 aa17.34■□□□□ 0.37
APOC4-202ENST00000592954 SF3B3Q15393 1217 aaKnown RBP17.34■□□□□ 0.37
APOC4-202ENST00000592954 TMC4Q7Z404 712 aa17.34■□□□□ 0.37
APOC4-202ENST00000592954 ZBTB38Q8NAP3 1195 aaPredicted RBP17.34■□□□□ 0.37
APOC4-202ENST00000592954 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
APOC4-202ENST00000592954 CELF1Q92879 486 aaKnown RBP17.34■□□□□ 0.37
APOC4-202ENST00000592954 STK31Q9BXU1 1019 aa17.34■□□□□ 0.37
APOC4-202ENST00000592954 RTFDC1Q9BY42 306 aaPredicted RBP17.34■□□□□ 0.37
APOC4-202ENST00000592954 ZNRF3Q9ULT6 936 aa17.34■□□□□ 0.37
APOC4-202ENST00000592954 TWISTNBQ3B726 338 aaPredicted RBP17.33■□□□□ 0.36
APOC4-202ENST00000592954 MAP1SQ66K74 1059 aaPredicted RBP17.33■□□□□ 0.36
APOC4-202ENST00000592954 CWC25Q9NXE8 425 aaPredicted RBP17.33■□□□□ 0.36
APOC4-202ENST00000592954 NSFL1CQ9UNZ2 370 aaKnown RBP17.33■□□□□ 0.36
APOC4-202ENST00000592954 MAP3K2Q9Y2U5 619 aa17.33■□□□□ 0.36
APOC4-202ENST00000592954 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
APOC4-202ENST00000592954 EPS15P42566 896 aa17.32■□□□□ 0.36
APOC4-202ENST00000592954 CNTROBQ8N137 903 aa17.32■□□□□ 0.36
APOC4-202ENST00000592954 CCDC191Q8NCU4 936 aa17.32■□□□□ 0.36
APOC4-202ENST00000592954 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
APOC4-202ENST00000592954 CREBZFQ9NS37 354 aa17.32■□□□□ 0.36
APOC4-202ENST00000592954 MKRN1Q9UHC7 482 aaKnown RBP17.32■□□□□ 0.36
APOC4-202ENST00000592954 C6orf229H3BNL8 230 aa17.31■□□□□ 0.36
APOC4-202ENST00000592954 SCNN1DP51172 638 aa17.31■□□□□ 0.36
APOC4-202ENST00000592954 CXCL9Q07325 125 aa17.31■□□□□ 0.36
APOC4-202ENST00000592954 KIAA2012Q0VF49 1180 aa17.31■□□□□ 0.36
APOC4-202ENST00000592954 CCDC85AQ96PX6 553 aaPredicted RBP17.31■□□□□ 0.36
APOC4-202ENST00000592954 TAF1P21675 1872 aa17.31■□□□□ 0.36
APOC4-202ENST00000592954 PASKQ96RG2 1323 aa17.3■□□□□ 0.36
APOC4-202ENST00000592954 PI4KAP2A4QPH2 592 aa17.3■□□□□ 0.36
APOC4-202ENST00000592954 RAD17O75943 681 aa17.3■□□□□ 0.36
APOC4-202ENST00000592954 ITGBL1O95965 494 aaPredicted RBP17.3■□□□□ 0.36
APOC4-202ENST00000592954 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
APOC4-202ENST00000592954 PCCAP05165 728 aaPredicted RBP17.3■□□□□ 0.36
APOC4-202ENST00000592954 RPS8P62241 208 aaKnown RBP17.3■□□□□ 0.36
APOC4-202ENST00000592954 KSR2Q6VAB6 950 aa17.3■□□□□ 0.36
APOC4-202ENST00000592954 FAM9BQ8IZU0 186 aa17.3■□□□□ 0.36
APOC4-202ENST00000592954 PI4KAP1Q8N8J0 262 aa17.3■□□□□ 0.36
APOC4-202ENST00000592954 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
APOC4-202ENST00000592954 IL16Q14005 1332 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 RIMBP2O15034 1052 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 GPSM2P81274 684 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 NEXNQ0ZGT2 675 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 SEC31BQ9NQW1 1179 aa17.29■□□□□ 0.36
APOC4-202ENST00000592954 TMEM88BA6NKF7 163 aa17.28■□□□□ 0.36
APOC4-202ENST00000592954 PDE8AO60658 829 aa17.28■□□□□ 0.36
APOC4-202ENST00000592954 GMPSP49915 693 aaPredicted RBP17.28■□□□□ 0.36
APOC4-202ENST00000592954 TNIP1Q15025 636 aa17.28■□□□□ 0.36
APOC4-202ENST00000592954 CCDC152Q4G0S7 254 aa17.28■□□□□ 0.36
APOC4-202ENST00000592954 G2E3Q7L622 706 aa17.28■□□□□ 0.36
APOC4-202ENST00000592954 TNS4Q8IZW8 715 aa17.28■□□□□ 0.36
APOC4-202ENST00000592954 GPRC5DQ9NZD1 345 aa17.28■□□□□ 0.36
APOC4-202ENST00000592954 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
APOC4-202ENST00000592954 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
APOC4-202ENST00000592954 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.36
APOC4-202ENST00000592954 DBNDD1Q9H9R9 158 aa17.27■□□□□ 0.36
APOC4-202ENST00000592954 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
APOC4-202ENST00000592954 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
APOC4-202ENST00000592954 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
APOC4-202ENST00000592954 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
APOC4-202ENST00000592954 EYA3Q99504 573 aa17.26■□□□□ 0.35
APOC4-202ENST00000592954 ADARB2Q9NS39 739 aaKnown RBP17.26■□□□□ 0.35
APOC4-202ENST00000592954 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
APOC4-202ENST00000592954 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
APOC4-202ENST00000592954 LTBP1Q14766 1721 aa17.25■□□□□ 0.35
APOC4-202ENST00000592954 YDJCA8MPS7 323 aa17.25■□□□□ 0.35
APOC4-202ENST00000592954 EXOSC9Q06265 439 aaKnown RBP17.25■□□□□ 0.35
APOC4-202ENST00000592954 DOK7Q18PE1 504 aa17.25■□□□□ 0.35
APOC4-202ENST00000592954 CWF19L2Q2TBE0 894 aaKnown RBP17.25■□□□□ 0.35
APOC4-202ENST00000592954 GPR101Q96P66 508 aaPredicted RBP17.25■□□□□ 0.35
APOC4-202ENST00000592954 COL4A1P02462 1669 aa17.24■□□□□ 0.35
APOC4-202ENST00000592954 G3V3G9 751 aa17.24■□□□□ 0.35
APOC4-202ENST00000592954 FLIIQ13045 1269 aa17.24■□□□□ 0.35
APOC4-202ENST00000592954 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
APOC4-202ENST00000592954 DCAF8Q5TAQ9 597 aa17.24■□□□□ 0.35
APOC4-202ENST00000592954 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
APOC4-202ENST00000592954 TBC1D16Q8TBP0 767 aa17.24■□□□□ 0.35
APOC4-202ENST00000592954 ZC3H12CQ9C0D7 883 aaKnown RBP17.24■□□□□ 0.35
APOC4-202ENST00000592954 ABT1Q9ULW3 272 aaKnown RBP17.24■□□□□ 0.35
APOC4-202ENST00000592954 ADAMTSL1Q8N6G6 1762 aa17.24■□□□□ 0.35
APOC4-202ENST00000592954 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
APOC4-202ENST00000592954 CDHR2Q9BYE9 1310 aa17.23■□□□□ 0.35
APOC4-202ENST00000592954 NEURL1BA8MQ27 555 aa17.23■□□□□ 0.35
APOC4-202ENST00000592954 UFL1O94874 794 aa17.23■□□□□ 0.35
APOC4-202ENST00000592954 FMR1Q06787 632 aaKnown RBP eCLIP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms