RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-219ENST00000592604 TDRD7Q8NHU6 1098 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-219ENST00000592604 GOLGA6L4A6NEF3 574 aa17.59■□□□□ 0.41
SMARCA4-219ENST00000592604 ANKRD7Q92527 254 aa17.59■□□□□ 0.41
SMARCA4-219ENST00000592604 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-219ENST00000592604 CHMP3Q9Y3E7 222 aa17.59■□□□□ 0.41
SMARCA4-219ENST00000592604 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.41
SMARCA4-219ENST00000592604 PLA2G4DQ86XP0 818 aa17.58■□□□□ 0.41
SMARCA4-219ENST00000592604 FSD1Q9BTV5 496 aa17.58■□□□□ 0.41
SMARCA4-219ENST00000592604 UTP14CQ5TAP6 766 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 C14orf37Q86TY3 774 aa17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 CKAP2LQ8IYA6 745 aa17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 BOLA2Q9H3K6 86 aa17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 PHF8Q9UPP1 1060 aa17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 TAF6LQ9Y6J9 622 aa17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 FAM177BA6PVY3 158 aa17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 TCEANC2Q96MN5 208 aa17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 TLR7Q9NYK1 1049 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-219ENST00000592604 ZNF75DP51815 510 aa17.57■□□□□ 0.4
SMARCA4-219ENST00000592604 CCDC186Q7Z3E2 898 aa17.57■□□□□ 0.4
SMARCA4-219ENST00000592604 MRC1P22897 1456 aa17.57■□□□□ 0.4
SMARCA4-219ENST00000592604 TAF5LO75529 589 aa17.57■□□□□ 0.4
SMARCA4-219ENST00000592604 PPP4R3BQ5MIZ7 849 aa17.57■□□□□ 0.4
SMARCA4-219ENST00000592604 DDX58O95786 925 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 CAVIN2O95810 425 aa17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 ZSCAN20P17040 1043 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 KRT32Q14532 448 aa17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 PGBD1Q96JS3 809 aa17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 ZNF589Q86UQ0 364 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 DDX21Q9NR30 783 aaKnown RBP eCLIP17.56■□□□□ 0.4
SMARCA4-219ENST00000592604 DMTNQ08495 405 aa17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 C1orf141Q5JVX7 400 aa17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 GTF3C6Q969F1 213 aa17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 NR1I2O75469 434 aa17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 PXDNQ92626 1479 aa17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 SIPA1L3O60292 1781 aaPredicted RBP17.55■□□□□ 0.4
SMARCA4-219ENST00000592604 RESTQ13127 1097 aa17.54■□□□□ 0.4
SMARCA4-219ENST00000592604 ATP2B3Q16720 1220 aa17.54■□□□□ 0.4
SMARCA4-219ENST00000592604 TRIM5Q9C035 493 aa17.54■□□□□ 0.4
SMARCA4-219ENST00000592604 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
SMARCA4-219ENST00000592604 ZNF165P49910 485 aa17.54■□□□□ 0.4
SMARCA4-219ENST00000592604 SYCP1Q15431 976 aa17.54■□□□□ 0.4
SMARCA4-219ENST00000592604 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
SMARCA4-219ENST00000592604 IGKV5-2P06315 115 aa17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 CDC25BP30305 580 aa17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 LRMPQ12912 555 aa17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 STK3Q13188 491 aa17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 PDIA6Q15084 440 aa17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 NRBP1Q9UHY1 535 aa17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 PRDM10Q9NQV6 1147 aa17.53■□□□□ 0.4
SMARCA4-219ENST00000592604 DRC7Q8IY82 874 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 ZFP91Q96JP5 570 aaPredicted RBP17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 NEK1Q96PY6 1258 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 TULP1O00294 542 aaPredicted RBP17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 JAK2O60674 1132 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 ATP5JP18859 108 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 CBX1P83916 185 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 BICD2Q8TD16 824 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 BRF1Q92994 677 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 SIL1Q9H173 461 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
SMARCA4-219ENST00000592604 LMTK3Q96Q04 1460 aa17.52■□□□□ 0.39
SMARCA4-219ENST00000592604 SMTNL1A8MU46 457 aa17.51■□□□□ 0.39
SMARCA4-219ENST00000592604 DNAJC25Q9H1X3 360 aa17.51■□□□□ 0.39
SMARCA4-219ENST00000592604 COL15A1P39059 1388 aa17.51■□□□□ 0.39
SMARCA4-219ENST00000592604 SARM1Q6SZW1 724 aa17.51■□□□□ 0.39
SMARCA4-219ENST00000592604 ADAMTS7Q9UKP4 1686 aa17.51■□□□□ 0.39
SMARCA4-219ENST00000592604 GTPBP4Q9BZE4 634 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-219ENST00000592604 COPRSQ9NQ92 184 aa17.51■□□□□ 0.39
SMARCA4-219ENST00000592604 IQCB1Q15051 598 aa17.5■□□□□ 0.39
SMARCA4-219ENST00000592604 SMARCC2Q8TAQ2 1214 aa17.5■□□□□ 0.39
SMARCA4-219ENST00000592604 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-219ENST00000592604 NEURL1BA8MQ27 555 aa17.5■□□□□ 0.39
SMARCA4-219ENST00000592604 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
SMARCA4-219ENST00000592604 CLIP2Q9UDT6 1046 aa17.5■□□□□ 0.39
SMARCA4-219ENST00000592604 PAXBP1Q9Y5B6 917 aa17.5■□□□□ 0.39
SMARCA4-219ENST00000592604 AIMP1Q12904 312 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 Q6ZUG5 572 aa17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 CACTINQ8WUQ7 758 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 LLPHQ9BRT6 129 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 MYH15Q9Y2K3 1946 aa17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 TNNT1P13805 278 aa17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 GCKRQ14397 625 aa17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 EDC3Q96F86 508 aaKnown RBP17.49■□□□□ 0.39
SMARCA4-219ENST00000592604 CTAGE5O15320 804 aa17.48■□□□□ 0.39
SMARCA4-219ENST00000592604 ADD1P35611 737 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-219ENST00000592604 NCBP1Q09161 790 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-219ENST00000592604 EPHA10Q5JZY3 1008 aa17.48■□□□□ 0.39
SMARCA4-219ENST00000592604 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
SMARCA4-219ENST00000592604 FEZ1Q99689 392 aa17.48■□□□□ 0.39
SMARCA4-219ENST00000592604 H3BQV1 296 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms