RNA–Protein interactions for RNA: ENST00000592410.5

ERCC1-215, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 2

Gene ERCC1, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-215	ENST00000592410	BEND3	Q5T5X7	828 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	RIC3	Q7Z5B4	369 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	LINS1	Q8NG48	757 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	TEX13A	Q9BXU3	409 aa	Predicted RBP	7	□□□□□ -1.29
ERCC1-215	ENST00000592410	LRRCC1	Q9C099	1032 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	USP44	Q9H0E7	712 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	BTG4	Q9NY30	223 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	C9orf78	Q9NZ63	289 aa	Predicted RBP	7	□□□□□ -1.29
ERCC1-215	ENST00000592410	MAP3K2	Q9Y2U5	619 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	NWD2	Q9ULI1	1742 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	LRP6	O75581	1613 aa		7	□□□□□ -1.29
ERCC1-215	ENST00000592410	COL16A1	Q07092	1604 aa	Predicted RBP	7	□□□□□ -1.29
ERCC1-215	ENST00000592410	AFDN	P55196	1824 aa	Known RBP	6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	ADCY9	O60503	1353 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	GRXCR2	A6NFK2	248 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	CDC45	O75419	566 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	PRIM1	P49642	420 aa	Known RBP	6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	SLC39A6	Q13433	755 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	ERC1	Q8IUD2	1116 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	SSH3	Q8TE77	659 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	ZNF496	Q96IT1	587 aa	Predicted RBP	6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	ANP32E	Q9BTT0	268 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	TMOD3	Q9NYL9	352 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	THRAP3	Q9Y2W1	955 aa	Known RBP	6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	LRRFIP2	Q9Y608	721 aa	Known RBP	6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	ARFGEF2	Q9Y6D5	1785 aa		6.99	□□□□□ -1.29
ERCC1-215	ENST00000592410	MTX1	Q13505	466 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	TTC22	Q5TAA0	569 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	PLEKHM2	Q8IWE5	1019 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	DDX54	Q8TDD1	881 aa	Known RBP	6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	TBC1D32	Q96NH3	1257 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	OSBPL3	Q9H4L5	887 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	FAM198A	Q9UFP1	575 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	ITGB4	P16144	1822 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	DISP2	A7MBM2	1401 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	NRAP	Q86VF7	1730 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	UTY	O14607	1347 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	AOX1	Q06278	1338 aa		6.98	□□□□□ -1.29
ERCC1-215	ENST00000592410	SMAP	O00193	183 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	GRM8	O00222	908 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	EXOC5	O00471	708 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	SRGAP3	O43295	1099 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	ANXA1	P04083	346 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	MYL6B	P14649	208 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	MFAP1	P55081	439 aa	Known RBP	6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	PPP4C	P60510	307 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	MYT1	Q01538	1121 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	AIMP1	Q12904	312 aa	Known RBP	6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	TNS2	Q63HR2	1409 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	PPP1R42	Q7Z4L9	355 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	VSIG10	Q8N0Z9	540 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	KIF1BP	Q96EK5	621 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	METTL22	Q9BUU2	404 aa	Predicted RBP	6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	C22orf23	Q9BZE7	217 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	TOGARAM1	Q9Y4F4	1720 aa		6.97	□□□□□ -1.29
ERCC1-215	ENST00000592410	KCP	Q6ZWJ8	1503 aa		6.96	□□□□□ -1.29
ERCC1-215	ENST00000592410	GLI3	P10071	1580 aa		6.96	□□□□□ -1.29
ERCC1-215	ENST00000592410	AK9	Q5TCS8	1911 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	PNMA6E	A0A0J9YXQ4	647 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	APBB1	O00213	710 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	SURF6	O75683	361 aa	Known RBP	6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	OSBP	P22059	807 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	OS9	Q13438	667 aa	Predicted RBP	6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	PROSER3	Q2NL68	480 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	COPS6	Q7L5N1	327 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	PLBD2	Q8NHP8	589 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	XAGE3	Q8WTP9	111 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	GPATCH3	Q96I76	525 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	RTN4	Q9NQC3	1192 aa	Known RBP	6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	USP35	Q9P2H5	1018 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	EXOC6B	Q9Y2D4	811 aa		6.96	□□□□□ -1.3
ERCC1-215	ENST00000592410	COL15A1	P39059	1388 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	SRCAP	Q6ZRS2	3230 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	PRAMEF22	A3QJZ6	481 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	NEURL1B	A8MQ27	555 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	NBPF26	B4DH59	902 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	C3orf80	F5H4A9	247 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	REC8	O95072	547 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	STARD3NL	O95772	234 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	NBPF7	P0C2Y1	421 aa	Predicted RBP	6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	MX1	P20591	662 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	RBM25	P49756	843 aa	Known RBP	6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	PDE1A	P54750	535 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	SAMD7	Q7Z3H4	446 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	TATDN2	Q93075	761 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	MYD88	Q99836	296 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	STAP2	Q9UGK3	403 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	PNMA3	Q9UL41	463 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	USP16	Q9Y5T5	823 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	NUP188	Q5SRE5	1749 aa		6.95	□□□□□ -1.3
ERCC1-215	ENST00000592410	TUBGCP6	Q96RT7	1819 aa		6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	DOT1L	Q8TEK3	1739 aa		6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	ERC2	O15083	957 aa		6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	SMARCA5	O60264	1052 aa	Predicted RBP	6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	GSPT1	P15170	499 aa	Known RBP	6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	SDS	P20132	328 aa		6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	G3BP1	Q13283	466 aa	Known RBP eCLIP	6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	GCKR	Q14397	625 aa		6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	CWF19L2	Q2TBE0	894 aa	Known RBP	6.94	□□□□□ -1.3
ERCC1-215	ENST00000592410	KIF6	Q6ZMV9	814 aa		6.94	□□□□□ -1.3

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