RNA–Protein interactions for RNA: ENST00000592262.1

GPATCH1-204, Transcript of G-patch domain containing 1, human

TSL 2

Gene GPATCH1, Length 1,978 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPATCH1-204	ENST00000592262	DDX11L8	A8MPP1	907 aa		13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	MCM4	P33991	863 aa		13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	RAB3GAP1	Q15042	981 aa		13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	DZIP3	Q86Y13	1208 aa	Known RBP	13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	CEP126	Q9P2H0	1117 aa		13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	DBNL	Q9UJU6	430 aa	Known RBP	13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	AKAP2	Q9Y2D5	859 aa		13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	ZBTB1	Q9Y2K1	713 aa		13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.75	□□□□□ -0.21
GPATCH1-204	ENST00000592262	ATP6V1A	P38606	617 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	IFIT5	Q13325	482 aa	Known RBP	13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	VPS72	Q15906	364 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	NLRP10	Q86W26	655 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	ACSBG1	Q96GR2	724 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	NEUROD6	Q96NK8	337 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	CCDC87	Q9NVE4	849 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	RFX7	Q2KHR2	1363 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	CSF1R	P07333	972 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	GSE1	Q14687	1217 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	ATG9A	Q7Z3C6	839 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	FAM89A	Q96GI7	184 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	HAUS7	Q99871	368 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	PALD1	Q9ULE6	856 aa		13.74	□□□□□ -0.21
GPATCH1-204	ENST00000592262	LOC102724428	A0A0B4J2F2	783 aa		13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	KCNJ4	P48050	445 aa		13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	SIK1	P57059	783 aa		13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	HLF	Q16534	295 aa		13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	AK7	Q96M32	723 aa		13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	DBNDD2	Q9BQY9	259 aa		13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	TRMT112	Q9UI30	125 aa	Known RBP	13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	TJP1	Q07157	1748 aa		13.73	□□□□□ -0.21
GPATCH1-204	ENST00000592262	HSP90B1	P14625	803 aa	Known RBP	13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	ZKSCAN1	P17029	563 aa	Predicted RBP	13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	NMI	Q13287	307 aa	Predicted RBP	13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	C8orf37	Q96NL8	207 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	IL25	Q9H293	177 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	SNRK	Q9NRH2	765 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	DOT1L	Q8TEK3	1739 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	GPT	P24298	496 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	RNF20	Q5VTR2	975 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	TNPO1	Q92973	898 aa	Known RBP	13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	SNX14	Q9Y5W7	946 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	CCDC171	Q6TFL3	1326 aa		13.72	□□□□□ -0.21
GPATCH1-204	ENST00000592262	ANKRD18B	A2A2Z9	1011 aa		13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	GOLGA6L22	H0YM25	854 aa		13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	IRS4	O14654	1257 aa	Predicted RBP	13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	PDE8A	O60658	829 aa		13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	EIF5	P55010	431 aa	Known RBP	13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	ZNF594	Q96JF6	807 aa	Predicted RBP	13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	TMX3	Q96JJ7	454 aa		13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	TBC1D2B	Q9UPU7	963 aa		13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	SPATA31A6	Q5VVP1	1343 aa		13.71	□□□□□ -0.21
GPATCH1-204	ENST00000592262	CRKL	P46109	303 aa	Known RBP	13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	FAM98C	Q17RN3	349 aa	Known RBP	13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	LRRC24	Q50LG9	513 aa		13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	CCDC158	Q5M9N0	1113 aa		13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	GORAB	Q5T7V8	394 aa		13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	INTS5	Q6P9B9	1019 aa	Known RBP	13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	ZNF34	Q8IZ26	560 aa		13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	INTS4	Q96HW7	963 aa	Known RBP	13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	DNAJC2	Q99543	621 aa	Known RBP	13.71	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PALLD	Q8WX93	1383 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	KAT6B	Q8WYB5	2073 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PSMA5	P28066	241 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	CTSW	P56202	376 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PARP10	Q53GL7	1025 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	KCNB2	Q92953	911 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	FAM227B	Q96M60	508 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	TM6SF1	Q9BZW5	370 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262	SSUH2	Q9Y2M2	353 aa		13.7	□□□□□ -0.22
GPATCH1-204	ENST00000592262		A0A1B0GUL7	405 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	TIMM10	P62072	90 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PTH1R	Q03431	593 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	CUL4A	Q13619	759 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	TTLL11	Q8NHH1	800 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	MAP4K1	Q92918	833 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PRPF40B	Q6NWY9	871 aa	Known RBP	13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	KBTBD3	Q8NAB2	608 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	UPF3B	Q9BZI7	483 aa	Known RBP	13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	HMG20B	Q9P0W2	317 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	ZNF652	Q9Y2D9	606 aa		13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	RBM8A	Q9Y5S9	174 aa	Known RBP	13.69	□□□□□ -0.22
GPATCH1-204	ENST00000592262	ZNF609	O15014	1411 aa		13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	IFIT1	P09914	478 aa	Known RBP	13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	ITGA6	P23229	1130 aa		13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	NECTIN1	Q15223	517 aa		13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	MCMDC2	Q4G0Z9	681 aa		13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	LDHAL6A	Q6ZMR3	332 aa		13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	UTP14A	Q9BVJ6	771 aa	Known RBP	13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PUS3	Q9BZE2	481 aa	Known RBP	13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	PAG1	Q9NWQ8	432 aa		13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262	CYP46A1	Q9Y6A2	500 aa		13.68	□□□□□ -0.22
GPATCH1-204	ENST00000592262		A0A0D9SFI3	127 aa		13.67	□□□□□ -0.22
GPATCH1-204	ENST00000592262	METTL24	Q5JXM2	366 aa		13.67	□□□□□ -0.22
GPATCH1-204	ENST00000592262	TTC39A	Q5SRH9	613 aa		13.67	□□□□□ -0.22
GPATCH1-204	ENST00000592262	CREB3L3	Q68CJ9	461 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms