RNA–Protein interactions for RNA: ENST00000592197.5

RANBP3-226, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 530 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-226ENST00000592197 NBPF7P0C2Y1 421 aaPredicted RBP17.73■□□□□ 0.43
RANBP3-226ENST00000592197 ATF7IPQ6VMQ6 1270 aa17.73■□□□□ 0.43
RANBP3-226ENST00000592197 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
RANBP3-226ENST00000592197 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
RANBP3-226ENST00000592197 USP44Q9H0E7 712 aa17.73■□□□□ 0.43
RANBP3-226ENST00000592197 IPO8O15397 1037 aaKnown RBP17.72■□□□□ 0.43
RANBP3-226ENST00000592197 C21orf2O43822 256 aa17.72■□□□□ 0.43
RANBP3-226ENST00000592197 CSF1RP07333 972 aa17.72■□□□□ 0.43
RANBP3-226ENST00000592197 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
RANBP3-226ENST00000592197 CTSWP56202 376 aa17.72■□□□□ 0.43
RANBP3-226ENST00000592197 FOXO4P98177 505 aa17.72■□□□□ 0.43
RANBP3-226ENST00000592197 INTS3Q68E01 1043 aaKnown RBP17.72■□□□□ 0.43
RANBP3-226ENST00000592197 OLFM4Q6UX06 510 aa17.72■□□□□ 0.43
RANBP3-226ENST00000592197 FRAT1Q92837 279 aaPredicted RBP17.72■□□□□ 0.43
RANBP3-226ENST00000592197 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
RANBP3-226ENST00000592197 EPHA10Q5JZY3 1008 aa17.71■□□□□ 0.43
RANBP3-226ENST00000592197 ZKSCAN2Q63HK3 967 aa17.71■□□□□ 0.43
RANBP3-226ENST00000592197 SEC31BQ9NQW1 1179 aa17.71■□□□□ 0.43
RANBP3-226ENST00000592197 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
RANBP3-226ENST00000592197 LRRC37AA6NMS7 1700 aa17.71■□□□□ 0.43
RANBP3-226ENST00000592197 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
RANBP3-226ENST00000592197 PRELPP51888 382 aa17.7■□□□□ 0.42
RANBP3-226ENST00000592197 ARHGAP27Q6ZUM4 889 aa17.7■□□□□ 0.42
RANBP3-226ENST00000592197 DDX46Q7L014 1031 aaKnown RBP17.7■□□□□ 0.42
RANBP3-226ENST00000592197 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
RANBP3-226ENST00000592197 C9orf78Q9NZ63 289 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-226ENST00000592197 ZNF219Q9P2Y4 722 aaPredicted RBP17.7■□□□□ 0.42
RANBP3-226ENST00000592197 NFKBIEO00221 500 aa17.69■□□□□ 0.42
RANBP3-226ENST00000592197 BBOX1O75936 387 aa17.69■□□□□ 0.42
RANBP3-226ENST00000592197 GRAPQ13588 217 aa17.69■□□□□ 0.42
RANBP3-226ENST00000592197 CCDC152Q4G0S7 254 aa17.69■□□□□ 0.42
RANBP3-226ENST00000592197 GRAPLQ8TC17 118 aaPredicted RBP17.69■□□□□ 0.42
RANBP3-226ENST00000592197 GREM2Q9H772 168 aa17.69■□□□□ 0.42
RANBP3-226ENST00000592197 SPEF2Q9C093 1822 aa17.68■□□□□ 0.42
RANBP3-226ENST00000592197 PPEF1O14829 653 aaPredicted RBP17.68■□□□□ 0.42
RANBP3-226ENST00000592197 RLBP1P12271 317 aa17.68■□□□□ 0.42
RANBP3-226ENST00000592197 CLUAP1Q96AJ1 413 aa17.68■□□□□ 0.42
RANBP3-226ENST00000592197 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
RANBP3-226ENST00000592197 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
RANBP3-226ENST00000592197 ATP6V0A2Q9Y487 856 aa17.68■□□□□ 0.42
RANBP3-226ENST00000592197 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
RANBP3-226ENST00000592197 LTBP1Q14766 1721 aa17.67■□□□□ 0.42
RANBP3-226ENST00000592197 RPS8P62241 208 aaKnown RBP17.66■□□□□ 0.42
RANBP3-226ENST00000592197 RASSF7Q02833 373 aa17.66■□□□□ 0.42
RANBP3-226ENST00000592197 RABL6Q3YEC7 729 aaPredicted RBP17.66■□□□□ 0.42
RANBP3-226ENST00000592197 SOGA3Q5TF21 947 aa17.66■□□□□ 0.42
RANBP3-226ENST00000592197 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
RANBP3-226ENST00000592197 TMEM57Q8N5G2 664 aa17.66■□□□□ 0.42
RANBP3-226ENST00000592197 LTBP3Q9NS15 1303 aa17.66■□□□□ 0.42
RANBP3-226ENST00000592197 FAM161AQ3B820 660 aa17.65■□□□□ 0.42
RANBP3-226ENST00000592197 CCDC93Q567U6 631 aa17.65■□□□□ 0.42
RANBP3-226ENST00000592197 CC2D2BQ6DHV5 1058 aa17.65■□□□□ 0.42
RANBP3-226ENST00000592197 LMBR1LQ6UX01 489 aa17.65■□□□□ 0.42
RANBP3-226ENST00000592197 ANKRD44Q8N8A2 993 aa17.65■□□□□ 0.42
RANBP3-226ENST00000592197 MEIS3Q99687 375 aa17.65■□□□□ 0.42
RANBP3-226ENST00000592197 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
RANBP3-226ENST00000592197 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.41
RANBP3-226ENST00000592197 DUOX1Q9NRD9 1551 aa17.64■□□□□ 0.41
RANBP3-226ENST00000592197 PLIN1O60240 522 aa17.63■□□□□ 0.41
RANBP3-226ENST00000592197 ITGA6P23229 1130 aa17.63■□□□□ 0.41
RANBP3-226ENST00000592197 DZIP1LQ8IYY4 767 aaKnown RBP17.63■□□□□ 0.41
RANBP3-226ENST00000592197 RTKN2Q8IZC4 609 aa17.63■□□□□ 0.41
RANBP3-226ENST00000592197 A0A1B0GUL6 1792 aa17.62■□□□□ 0.41
RANBP3-226ENST00000592197 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
RANBP3-226ENST00000592197 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
RANBP3-226ENST00000592197 CDC5LQ99459 802 aaKnown RBP17.62■□□□□ 0.41
RANBP3-226ENST00000592197 PSMD1Q99460 953 aa17.62■□□□□ 0.41
RANBP3-226ENST00000592197 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
RANBP3-226ENST00000592197 FKBP4Q02790 459 aaKnown RBP eCLIP17.61■□□□□ 0.41
RANBP3-226ENST00000592197 ANKRD18AQ8IVF6 992 aa17.61■□□□□ 0.41
RANBP3-226ENST00000592197 RTFDC1Q9BY42 306 aaPredicted RBP17.61■□□□□ 0.41
RANBP3-226ENST00000592197 COL4A5P29400 1685 aa17.61■□□□□ 0.41
RANBP3-226ENST00000592197 UBTFL1P0CB47 393 aaPredicted RBP17.6■□□□□ 0.41
RANBP3-226ENST00000592197 LMNB1P20700 586 aa17.6■□□□□ 0.41
RANBP3-226ENST00000592197 C9orf131Q5VYM1 1079 aa17.6■□□□□ 0.41
RANBP3-226ENST00000592197 BSDC1Q9NW68 430 aaPredicted RBP17.6■□□□□ 0.41
RANBP3-226ENST00000592197 TIAM2Q8IVF5 1701 aa17.6■□□□□ 0.41
RANBP3-226ENST00000592197 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
RANBP3-226ENST00000592197 ZBTB7BO15156 539 aaPredicted RBP17.59■□□□□ 0.41
RANBP3-226ENST00000592197 GPSM2P81274 684 aa17.59■□□□□ 0.41
RANBP3-226ENST00000592197 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
RANBP3-226ENST00000592197 FTSJ3Q8IY81 847 aaKnown RBP17.59■□□□□ 0.41
RANBP3-226ENST00000592197 LRRFIP2Q9Y608 721 aaKnown RBP17.59■□□□□ 0.41
RANBP3-226ENST00000592197 C20orf194Q5TEA3 1177 aa17.58■□□□□ 0.4
RANBP3-226ENST00000592197 ZNF594Q96JF6 807 aaPredicted RBP17.58■□□□□ 0.4
RANBP3-226ENST00000592197 ZNF277Q9NRM2 450 aaPredicted RBP17.58■□□□□ 0.4
RANBP3-226ENST00000592197 PODXL2Q9NZ53 605 aa17.58■□□□□ 0.4
RANBP3-226ENST00000592197 RNF181Q9P0P0 153 aa17.58■□□□□ 0.4
RANBP3-226ENST00000592197 MINPP1Q9UNW1 487 aa17.58■□□□□ 0.4
RANBP3-226ENST00000592197 WTIPA6NIX2 430 aaPredicted RBP17.57■□□□□ 0.4
RANBP3-226ENST00000592197 GNAI3P08754 354 aa17.57■□□□□ 0.4
RANBP3-226ENST00000592197 RFX5P48382 616 aaPredicted RBP17.57■□□□□ 0.4
RANBP3-226ENST00000592197 CCDC57Q2TAC2 916 aa17.57■□□□□ 0.4
RANBP3-226ENST00000592197 MPNDQ8N594 471 aa17.57■□□□□ 0.4
RANBP3-226ENST00000592197 POLLQ9UGP5 575 aa17.57■□□□□ 0.4
RANBP3-226ENST00000592197 CHMP3Q9Y3E7 222 aa17.57■□□□□ 0.4
RANBP3-226ENST00000592197 MS4A1P11836 297 aa17.56■□□□□ 0.4
RANBP3-226ENST00000592197 YY1P25490 414 aa17.56■□□□□ 0.4
RANBP3-226ENST00000592197 IARSP41252 1262 aaKnown RBP17.56■□□□□ 0.4
RANBP3-226ENST00000592197 PDE3AQ14432 1141 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms