RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CYP46A1Q9Y6A2 500 aa23.68■■□□□ 1.38
MBD3-209ENST00000592012 SLC27A2O14975 620 aa23.67■■□□□ 1.38
MBD3-209ENST00000592012 CHAMP1Q96JM3 812 aa23.67■■□□□ 1.38
MBD3-209ENST00000592012 PDRG1Q9NUG6 133 aa23.67■■□□□ 1.38
MBD3-209ENST00000592012 JCADQ9P266 1359 aa23.67■■□□□ 1.38
MBD3-209ENST00000592012 TIMM10P62072 90 aa23.67■■□□□ 1.38
MBD3-209ENST00000592012 DNAJC2Q99543 621 aaKnown RBP23.67■■□□□ 1.38
MBD3-209ENST00000592012 PRPF40AO75400 957 aaKnown RBP23.66■■□□□ 1.38
MBD3-209ENST00000592012 CIAO1O76071 339 aa23.66■■□□□ 1.38
MBD3-209ENST00000592012 MRE11P49959 708 aa23.66■■□□□ 1.38
MBD3-209ENST00000592012 NEUROD6Q96NK8 337 aa23.66■■□□□ 1.38
MBD3-209ENST00000592012 RFX7Q2KHR2 1363 aa23.66■■□□□ 1.38
MBD3-209ENST00000592012 TAF5LO75529 589 aa23.66■■□□□ 1.38
MBD3-209ENST00000592012 MAP3K15Q6ZN16 1313 aa23.65■■□□□ 1.38
MBD3-209ENST00000592012 PCCAP05165 728 aaPredicted RBP23.65■■□□□ 1.38
MBD3-209ENST00000592012 GAS2L3Q86XJ1 694 aa23.65■■□□□ 1.38
MBD3-209ENST00000592012 CYP19A1P11511 503 aaPredicted RBP23.65■■□□□ 1.38
MBD3-209ENST00000592012 GIGYF2Q6Y7W6 1299 aaKnown RBP23.65■■□□□ 1.38
MBD3-209ENST00000592012 FAM89AQ96GI7 184 aa23.65■■□□□ 1.38
MBD3-209ENST00000592012 LRP6O75581 1613 aa23.65■■□□□ 1.38
MBD3-209ENST00000592012 RPAP1Q9BWH6 1393 aaPredicted RBP23.65■■□□□ 1.38
MBD3-209ENST00000592012 PLCH1Q4KWH8 1693 aa23.64■■□□□ 1.38
MBD3-209ENST00000592012 PLA2G12BQ9BX93 195 aa23.64■■□□□ 1.38
MBD3-209ENST00000592012 PUS3Q9BZE2 481 aaKnown RBP23.64■■□□□ 1.38
MBD3-209ENST00000592012 RNF20Q5VTR2 975 aa23.64■■□□□ 1.37
MBD3-209ENST00000592012 ZBTB38Q8NAP3 1195 aaPredicted RBP23.64■■□□□ 1.37
MBD3-209ENST00000592012 GRPEL1Q9HAV7 217 aa23.64■■□□□ 1.37
MBD3-209ENST00000592012 LARGE1O95461 756 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 CHGBP05060 677 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 CCDC57Q2TAC2 916 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 USPL1Q5W0Q7 1092 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 DDX46Q7L014 1031 aaKnown RBP23.63■■□□□ 1.37
MBD3-209ENST00000592012 CCDC9Q9Y3X0 531 aaKnown RBP23.63■■□□□ 1.37
MBD3-209ENST00000592012 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.63■■□□□ 1.37
MBD3-209ENST00000592012 PSMA5P28066 241 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 HLFQ16534 295 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 TSGA10IPQ3SY00 556 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 KBTBD3Q8NAB2 608 aa23.63■■□□□ 1.37
MBD3-209ENST00000592012 SYTL4Q96C24 671 aaPredicted RBP23.62■■□□□ 1.37
MBD3-209ENST00000592012 ZSCAN31Q96LW9 406 aaPredicted RBP23.62■■□□□ 1.37
MBD3-209ENST00000592012 WDR33Q9C0J8 1336 aaKnown RBP23.62■■□□□ 1.37
MBD3-209ENST00000592012 ZNF609O15014 1411 aa23.62■■□□□ 1.37
MBD3-209ENST00000592012 CSF1RP07333 972 aa23.62■■□□□ 1.37
MBD3-209ENST00000592012 COL9A3Q14050 684 aaPredicted RBP23.62■■□□□ 1.37
MBD3-209ENST00000592012 TAF6LQ9Y6J9 622 aa23.62■■□□□ 1.37
MBD3-209ENST00000592012 A0A1B0GUL7 405 aa23.61■■□□□ 1.37
MBD3-209ENST00000592012 PANK2Q9BZ23 570 aa23.61■■□□□ 1.37
MBD3-209ENST00000592012 HMG20BQ9P0W2 317 aa23.61■■□□□ 1.37
MBD3-209ENST00000592012 FBXO3Q9UK99 471 aa23.61■■□□□ 1.37
MBD3-209ENST00000592012 PRIM1P49642 420 aaKnown RBP23.6■■□□□ 1.37
MBD3-209ENST00000592012 MCMDC2Q4G0Z9 681 aa23.6■■□□□ 1.37
MBD3-209ENST00000592012 GPT2Q8TD30 523 aa23.6■■□□□ 1.37
MBD3-209ENST00000592012 SH2B1Q9NRF2 756 aaPredicted RBP23.6■■□□□ 1.37
MBD3-209ENST00000592012 SEC62Q99442 399 aaKnown RBP23.6■■□□□ 1.37
MBD3-209ENST00000592012 PAG1Q9NWQ8 432 aa23.6■■□□□ 1.37
MBD3-209ENST00000592012 CEP126Q9P2H0 1117 aa23.6■■□□□ 1.37
MBD3-209ENST00000592012 ZBTB1Q9Y2K1 713 aa23.6■■□□□ 1.37
MBD3-209ENST00000592012 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.6■■□□□ 1.37
MBD3-209ENST00000592012 NLRP10Q86W26 655 aa23.59■■□□□ 1.37
MBD3-209ENST00000592012 GOLIM4O00461 696 aa23.59■■□□□ 1.37
MBD3-209ENST00000592012 NCLP19338 710 aaKnown RBP23.59■■□□□ 1.37
MBD3-209ENST00000592012 SYNE4Q8N205 404 aa23.59■■□□□ 1.37
MBD3-209ENST00000592012 PALLDQ8WX93 1383 aa23.59■■□□□ 1.37
MBD3-209ENST00000592012 ME3Q16798 604 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 CAVIN1Q6NZI2 390 aaKnown RBP23.58■■□□□ 1.37
MBD3-209ENST00000592012 TICAM2Q86XR7 235 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 SMC3Q9UQE7 1217 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 WNK3Q9BYP7 1800 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 GPTP24298 496 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 HSP90AB3PQ58FF7 597 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 BLOC1S2Q6QNY1 142 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 CCDC129Q6ZRS4 1044 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 CCDC83Q8IWF9 413 aa23.58■■□□□ 1.37
MBD3-209ENST00000592012 CDCA7Q9BWT1 371 aaPredicted RBP23.58■■□□□ 1.37
MBD3-209ENST00000592012 ADAMTS2O95450 1211 aa23.57■■□□□ 1.36
MBD3-209ENST00000592012 CCDC85AQ96PX6 553 aaPredicted RBP23.57■■□□□ 1.36
MBD3-209ENST00000592012 ALDH8A1Q9H2A2 487 aaPredicted RBP23.57■■□□□ 1.36
MBD3-209ENST00000592012 TPCN1Q9ULQ1 816 aa23.57■■□□□ 1.36
MBD3-209ENST00000592012 SH3TC1Q8TE82 1336 aa23.57■■□□□ 1.36
MBD3-209ENST00000592012 CDHR2Q9BYE9 1310 aa23.57■■□□□ 1.36
MBD3-209ENST00000592012 SYT1P21579 422 aa23.57■■□□□ 1.36
MBD3-209ENST00000592012 RPS6KB1P23443 525 aa23.57■■□□□ 1.36
MBD3-209ENST00000592012 SPATA31A1Q5TZJ5 1347 aa23.57■■□□□ 1.36
MBD3-209ENST00000592012 IFIT1P09914 478 aaKnown RBP23.56■■□□□ 1.36
MBD3-209ENST00000592012 ST3GAL1Q11201 340 aa23.56■■□□□ 1.36
MBD3-209ENST00000592012 IFIT5Q13325 482 aaKnown RBP23.56■■□□□ 1.36
MBD3-209ENST00000592012 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.56■■□□□ 1.36
MBD3-209ENST00000592012 STX6O43752 255 aa23.55■■□□□ 1.36
MBD3-209ENST00000592012 IL6STP40189 918 aaPredicted RBP23.55■■□□□ 1.36
MBD3-209ENST00000592012 ZNF445P59923 1031 aa23.55■■□□□ 1.36
MBD3-209ENST00000592012 AKAP2Q9Y2D5 859 aa23.55■■□□□ 1.36
MBD3-209ENST00000592012 THRAP3Q9Y2W1 955 aaKnown RBP23.55■■□□□ 1.36
MBD3-209ENST00000592012 U3KPZ7 1027 aaPredicted RBP23.55■■□□□ 1.36
MBD3-209ENST00000592012 TCHHQ07283 1943 aa23.55■■□□□ 1.36
MBD3-209ENST00000592012 ZSCAN23Q3MJ62 389 aa23.55■■□□□ 1.36
MBD3-209ENST00000592012 LTBP4Q8N2S1 1624 aa23.55■■□□□ 1.36
MBD3-209ENST00000592012 HELLSQ9NRZ9 838 aa23.55■■□□□ 1.36
MBD3-209ENST00000592012 ZSCAN22P10073 491 aaPredicted RBP23.54■■□□□ 1.36
MBD3-209ENST00000592012 KRT32Q14532 448 aa23.54■■□□□ 1.36
MBD3-209ENST00000592012 ANKRD1Q15327 319 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms