RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TMX4Q9H1E5 349 aaPredicted RBP34.83■■■■□ 3.17
SMAD4-213ENST00000591914 WDR90Q96KV7 1748 aa34.82■■■■□ 3.16
SMAD4-213ENST00000591914 NEURL1BA8MQ27 555 aa34.81■■■■□ 3.16
SMAD4-213ENST00000591914 CWF19L2Q2TBE0 894 aaKnown RBP34.81■■■■□ 3.16
SMAD4-213ENST00000591914 TMC4Q7Z404 712 aa34.81■■■■□ 3.16
SMAD4-213ENST00000591914 CDHR2Q9BYE9 1310 aa34.81■■■■□ 3.16
SMAD4-213ENST00000591914 SLFN5Q08AF3 891 aa34.8■■■■□ 3.16
SMAD4-213ENST00000591914 DNAAF4Q8WXU2 420 aa34.8■■■■□ 3.16
SMAD4-213ENST00000591914 JARID2Q92833 1246 aaPredicted RBP34.8■■■■□ 3.16
SMAD4-213ENST00000591914 LRRC37AA6NMS7 1700 aa34.8■■■■□ 3.16
SMAD4-213ENST00000591914 PDE8AO60658 829 aa34.78■■■■□ 3.16
SMAD4-213ENST00000591914 VEGFAP15692 232 aaPredicted RBP34.78■■■■□ 3.16
SMAD4-213ENST00000591914 CELF1Q92879 486 aaKnown RBP34.78■■■■□ 3.16
SMAD4-213ENST00000591914 COL4A1P02462 1669 aa34.78■■■■□ 3.16
SMAD4-213ENST00000591914 COL4A5P29400 1685 aa34.77■■■■□ 3.16
SMAD4-213ENST00000591914 C16orf71Q8IYS4 520 aaPredicted RBP34.77■■■■□ 3.16
SMAD4-213ENST00000591914 MIER1Q8N108 512 aa34.77■■■■□ 3.16
SMAD4-213ENST00000591914 RTFDC1Q9BY42 306 aaPredicted RBP34.77■■■■□ 3.16
SMAD4-213ENST00000591914 POTECB2RU33 542 aa34.76■■■■□ 3.16
SMAD4-213ENST00000591914 FZD9O00144 591 aa34.75■■■■□ 3.15
SMAD4-213ENST00000591914 DDNO94850 711 aaPredicted RBP34.75■■■■□ 3.15
SMAD4-213ENST00000591914 LINS1Q8NG48 757 aa34.75■■■■□ 3.15
SMAD4-213ENST00000591914 RBM46Q8TBY0 533 aaKnown RBP34.75■■■■□ 3.15
SMAD4-213ENST00000591914 GCKRQ14397 625 aa34.74■■■■□ 3.15
SMAD4-213ENST00000591914 CCDC152Q4G0S7 254 aa34.74■■■■□ 3.15
SMAD4-213ENST00000591914 DPP8Q6V1X1 898 aaPredicted RBP34.74■■■■□ 3.15
SMAD4-213ENST00000591914 JDP2Q8WYK2 163 aa34.74■■■■□ 3.15
SMAD4-213ENST00000591914 CDCA7LQ96GN5 454 aa34.74■■■■□ 3.15
SMAD4-213ENST00000591914 VPS33BQ9H267 617 aa34.74■■■■□ 3.15
SMAD4-213ENST00000591914 ZNF541Q9H0D2 1346 aa34.74■■■■□ 3.15
SMAD4-213ENST00000591914 H7C1W4 665 aa34.73■■■■□ 3.15
SMAD4-213ENST00000591914 MPNDQ8N594 471 aa34.73■■■■□ 3.15
SMAD4-213ENST00000591914 SUPT20HQ8NEM7 779 aa34.73■■■■□ 3.15
SMAD4-213ENST00000591914 TRMT2AQ8IZ69 625 aaKnown RBP34.72■■■■□ 3.15
SMAD4-213ENST00000591914 LARGE2Q8N3Y3 721 aa34.72■■■■□ 3.15
SMAD4-213ENST00000591914 RPS8P62241 208 aaKnown RBP34.71■■■■□ 3.15
SMAD4-213ENST00000591914 SEC31BQ9NQW1 1179 aa34.71■■■■□ 3.15
SMAD4-213ENST00000591914 DUOX1Q9NRD9 1551 aa34.7■■■■□ 3.15
SMAD4-213ENST00000591914 F6X3S4 739 aa34.7■■■■□ 3.15
SMAD4-213ENST00000591914 CTSWP56202 376 aa34.7■■■■□ 3.15
SMAD4-213ENST00000591914 UBE3BQ7Z3V4 1068 aa34.7■■■■□ 3.15
SMAD4-213ENST00000591914 L3MBTL3Q96JM7 780 aaPredicted RBP34.7■■■■□ 3.15
SMAD4-213ENST00000591914 MYH3P11055 1940 aa34.7■■■■□ 3.15
SMAD4-213ENST00000591914 PPIP5K2O43314 1243 aa34.69■■■■□ 3.14
SMAD4-213ENST00000591914 AOC3Q16853 763 aa34.68■■■■□ 3.14
SMAD4-213ENST00000591914 BEND3Q5T5X7 828 aa34.68■■■■□ 3.14
SMAD4-213ENST00000591914 HSPA6P17066 643 aa34.67■■■■□ 3.14
SMAD4-213ENST00000591914 CASP7P55210 303 aa34.67■■■■□ 3.14
SMAD4-213ENST00000591914 FSTL1Q12841 308 aa34.66■■■■□ 3.14
SMAD4-213ENST00000591914 TTLL11Q8NHH1 800 aa34.66■■■■□ 3.14
SMAD4-213ENST00000591914 CCDC85AQ96PX6 553 aaPredicted RBP34.66■■■■□ 3.14
SMAD4-213ENST00000591914 LTBP1Q14766 1721 aa34.66■■■■□ 3.14
SMAD4-213ENST00000591914 SCN4AP35499 1836 aa34.65■■■■□ 3.14
SMAD4-213ENST00000591914 NIM1KQ8IY84 436 aa34.65■■■■□ 3.14
SMAD4-213ENST00000591914 GPC2Q8N158 579 aa34.65■■■■□ 3.14
SMAD4-213ENST00000591914 MRPL50Q8N5N7 158 aaKnown RBP34.65■■■■□ 3.14
SMAD4-213ENST00000591914 PLA2G12BQ9BX93 195 aa34.65■■■■□ 3.14
SMAD4-213ENST00000591914 RTL9Q8NET4 1388 aa34.64■■■■□ 3.14
SMAD4-213ENST00000591914 KIAA2012Q0VF49 1180 aa34.64■■■■□ 3.14
SMAD4-213ENST00000591914 EIF6P56537 245 aaKnown RBP34.63■■■■□ 3.13
SMAD4-213ENST00000591914 NSFL1CQ9UNZ2 370 aaKnown RBP34.63■■■■□ 3.13
SMAD4-213ENST00000591914 IQCA1LA6NCM1 817 aa34.62■■■■□ 3.13
SMAD4-213ENST00000591914 GPSM2P81274 684 aa34.62■■■■□ 3.13
SMAD4-213ENST00000591914 SMC1BQ8NDV3 1235 aa34.62■■■■□ 3.13
SMAD4-213ENST00000591914 SSH1Q8WYL5 1049 aa34.62■■■■□ 3.13
SMAD4-213ENST00000591914 CEP350Q5VT06 3117 aa34.62■■■■□ 3.13
SMAD4-213ENST00000591914 GREM2Q9H772 168 aa34.61■■■■□ 3.13
SMAD4-213ENST00000591914 ANKRD18AQ8IVF6 992 aa34.6■■■■□ 3.13
SMAD4-213ENST00000591914 CDC5LQ99459 802 aaKnown RBP34.59■■■■□ 3.13
SMAD4-213ENST00000591914 PODXL2Q9NZ53 605 aa34.59■■■■□ 3.13
SMAD4-213ENST00000591914 ZNRF3Q9ULT6 936 aa34.59■■■■□ 3.13
SMAD4-213ENST00000591914 ALDH1L2Q3SY69 923 aa34.58■■■■□ 3.13
SMAD4-213ENST00000591914 POLLQ9UGP5 575 aa34.58■■■■□ 3.13
SMAD4-213ENST00000591914 PTPRCP08575 1304 aa34.57■■■■□ 3.13
SMAD4-213ENST00000591914 CT47B1P0C2W7 299 aaPredicted RBP34.57■■■■□ 3.12
SMAD4-213ENST00000591914 TAF1DQ9H5J8 278 aaPredicted RBP34.57■■■■□ 3.12
SMAD4-213ENST00000591914 ALDH1L1O75891 902 aa34.56■■■■□ 3.12
SMAD4-213ENST00000591914 CSF1RP07333 972 aa34.56■■■■□ 3.12
SMAD4-213ENST00000591914 SLC4A10Q6U841 1118 aa34.56■■■■□ 3.12
SMAD4-213ENST00000591914 TBC1D16Q8TBP0 767 aa34.56■■■■□ 3.12
SMAD4-213ENST00000591914 HACL1Q9UJ83 578 aa34.56■■■■□ 3.12
SMAD4-213ENST00000591914 GJA3Q9Y6H8 435 aa34.56■■■■□ 3.12
SMAD4-213ENST00000591914 WASHC4Q2M389 1173 aa34.55■■■■□ 3.12
SMAD4-213ENST00000591914 SRCIN1Q9C0H9 1055 aa34.55■■■■□ 3.12
SMAD4-213ENST00000591914 C6orf229H3BNL8 230 aa34.54■■■■□ 3.12
SMAD4-213ENST00000591914 GRM8O00222 908 aa34.54■■■■□ 3.12
SMAD4-213ENST00000591914 BCL2L13Q9BXK5 485 aa34.54■■■■□ 3.12
SMAD4-213ENST00000591914 BSDC1Q9NW68 430 aaPredicted RBP34.53■■■■□ 3.12
SMAD4-213ENST00000591914 ANKIB1Q9P2G1 1089 aa34.53■■■■□ 3.12
SMAD4-213ENST00000591914 SPEF2Q9C093 1822 aa34.53■■■■□ 3.12
SMAD4-213ENST00000591914 POTEIP0CG38 1075 aa34.52■■■■□ 3.12
SMAD4-213ENST00000591914 POTEJP0CG39 1038 aa34.52■■■■□ 3.12
SMAD4-213ENST00000591914 CXCL9Q07325 125 aa34.52■■■■□ 3.12
SMAD4-213ENST00000591914 FAM161AQ3B820 660 aa34.52■■■■□ 3.12
SMAD4-213ENST00000591914 EYA3Q99504 573 aa34.52■■■■□ 3.12
SMAD4-213ENST00000591914 ITGA6P23229 1130 aa34.51■■■■□ 3.12
SMAD4-213ENST00000591914 APLP1P51693 650 aa34.51■■■■□ 3.12
SMAD4-213ENST00000591914 FOXO4P98177 505 aa34.51■■■■□ 3.12
SMAD4-213ENST00000591914 EPHX2P34913 555 aa34.5■■■■□ 3.11
SMAD4-213ENST00000591914 SCNN1DP51172 638 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms