RNA–Protein interactions for RNA: ENST00000591620.1

TREM1-207, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 2,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-207ENST00000591620 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
TREM1-207ENST00000591620 NLRP3Q96P20 1036 aa13.22□□□□□ -0.29
TREM1-207ENST00000591620 YBX3P16989 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
TREM1-207ENST00000591620 FOXO4P98177 505 aa13.21□□□□□ -0.29
TREM1-207ENST00000591620 ZNF622Q969S3 477 aaKnown RBP eCLIP13.21□□□□□ -0.29
TREM1-207ENST00000591620 PDE8AO60658 829 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 CTSWP56202 376 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 ITPRIPQ8IWB1 547 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 PLA2G12BQ9BX93 195 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 SEC31BQ9NQW1 1179 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 COG6Q9Y2V7 657 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 SBF1O95248 1867 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
TREM1-207ENST00000591620 TTLL11Q8NHH1 800 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 MASTLQ96GX5 879 aa13.2□□□□□ -0.3
TREM1-207ENST00000591620 LTBP1Q14766 1721 aa13.19□□□□□ -0.3
TREM1-207ENST00000591620 NPR1P16066 1061 aa13.19□□□□□ -0.3
TREM1-207ENST00000591620 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
TREM1-207ENST00000591620 OLFM4Q6UX06 510 aa13.19□□□□□ -0.3
TREM1-207ENST00000591620 BICC1Q9H694 974 aaKnown RBP13.19□□□□□ -0.3
TREM1-207ENST00000591620 GREM2Q9H772 168 aa13.19□□□□□ -0.3
TREM1-207ENST00000591620 PIM2Q9P1W9 311 aa13.19□□□□□ -0.3
TREM1-207ENST00000591620 SUPT16HQ9Y5B9 1047 aaKnown RBP13.19□□□□□ -0.3
TREM1-207ENST00000591620 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
TREM1-207ENST00000591620 STYK1Q6J9G0 422 aa13.18□□□□□ -0.3
TREM1-207ENST00000591620 PRPF40BQ6NWY9 871 aaKnown RBP13.18□□□□□ -0.3
TREM1-207ENST00000591620 ANKRD44Q8N8A2 993 aa13.18□□□□□ -0.3
TREM1-207ENST00000591620 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
TREM1-207ENST00000591620 CELF1Q92879 486 aaKnown RBP13.18□□□□□ -0.3
TREM1-207ENST00000591620 BCS1LQ9Y276 419 aa13.18□□□□□ -0.3
TREM1-207ENST00000591620 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
TREM1-207ENST00000591620 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
TREM1-207ENST00000591620 C1orf115Q9H7X2 142 aa13.18□□□□□ -0.3
TREM1-207ENST00000591620 LRRFIP2Q9Y608 721 aaKnown RBP13.18□□□□□ -0.3
TREM1-207ENST00000591620 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
TREM1-207ENST00000591620 CSF1RP07333 972 aa13.17□□□□□ -0.3
TREM1-207ENST00000591620 UBTFL1P0CB47 393 aaPredicted RBP13.17□□□□□ -0.3
TREM1-207ENST00000591620 LMBR1LQ6UX01 489 aa13.17□□□□□ -0.3
TREM1-207ENST00000591620 TTLL6Q8N841 843 aa13.17□□□□□ -0.3
TREM1-207ENST00000591620 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
TREM1-207ENST00000591620 SNED1Q8TER0 1413 aa13.17□□□□□ -0.3
TREM1-207ENST00000591620 PDE3AQ14432 1141 aa13.17□□□□□ -0.3
TREM1-207ENST00000591620 DALRD3Q5D0E6 543 aaKnown RBP13.17□□□□□ -0.3
TREM1-207ENST00000591620 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.17□□□□□ -0.3
TREM1-207ENST00000591620 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
TREM1-207ENST00000591620 RTL9Q8NET4 1388 aa13.16□□□□□ -0.3
TREM1-207ENST00000591620 RABL6Q3YEC7 729 aaPredicted RBP13.16□□□□□ -0.3
TREM1-207ENST00000591620 CCDC152Q4G0S7 254 aa13.16□□□□□ -0.3
TREM1-207ENST00000591620 RBM17Q96I25 401 aaKnown RBP13.16□□□□□ -0.3
TREM1-207ENST00000591620 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
TREM1-207ENST00000591620 PDZRN3Q9UPQ7 1066 aa13.16□□□□□ -0.3
TREM1-207ENST00000591620 CHD4Q14839 1912 aa13.16□□□□□ -0.3
TREM1-207ENST00000591620 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
TREM1-207ENST00000591620 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
TREM1-207ENST00000591620 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
TREM1-207ENST00000591620 C21orf2O43822 256 aa13.15□□□□□ -0.3
TREM1-207ENST00000591620 ITGA6P23229 1130 aa13.15□□□□□ -0.3
TREM1-207ENST00000591620 GRAPQ13588 217 aa13.15□□□□□ -0.3
TREM1-207ENST00000591620 GRAPLQ8TC17 118 aaPredicted RBP13.15□□□□□ -0.3
TREM1-207ENST00000591620 C7orf43Q8WVR3 580 aa13.15□□□□□ -0.3
TREM1-207ENST00000591620 ZNF594Q96JF6 807 aaPredicted RBP13.15□□□□□ -0.3
TREM1-207ENST00000591620 DICER1Q9UPY3 1922 aaKnown RBP13.14□□□□□ -0.31
TREM1-207ENST00000591620 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
TREM1-207ENST00000591620 PPEF1O14829 653 aaPredicted RBP13.13□□□□□ -0.31
TREM1-207ENST00000591620 GNAI3P08754 354 aa13.13□□□□□ -0.31
TREM1-207ENST00000591620 MS4A1P11836 297 aa13.13□□□□□ -0.31
TREM1-207ENST00000591620 HSP90B1P14625 803 aaKnown RBP13.13□□□□□ -0.31
TREM1-207ENST00000591620 ALDH1B1P30837 517 aa13.13□□□□□ -0.31
TREM1-207ENST00000591620 GPR162Q16538 588 aa13.13□□□□□ -0.31
TREM1-207ENST00000591620 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
TREM1-207ENST00000591620 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
TREM1-207ENST00000591620 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
TREM1-207ENST00000591620 TIAM2Q8IVF5 1701 aa13.12□□□□□ -0.31
TREM1-207ENST00000591620 GNAI2P04899 355 aa13.12□□□□□ -0.31
TREM1-207ENST00000591620 RFX5P48382 616 aaPredicted RBP13.12□□□□□ -0.31
TREM1-207ENST00000591620 RPS8P62241 208 aaKnown RBP13.12□□□□□ -0.31
TREM1-207ENST00000591620 ZBTB40Q9NUA8 1239 aa13.12□□□□□ -0.31
TREM1-207ENST00000591620 PNMA6EA0A0J9YXQ4 647 aa13.12□□□□□ -0.31
TREM1-207ENST00000591620 COL4A5P29400 1685 aa13.11□□□□□ -0.31
TREM1-207ENST00000591620 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
TREM1-207ENST00000591620 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
TREM1-207ENST00000591620 NFKBIEO00221 500 aa13.11□□□□□ -0.31
TREM1-207ENST00000591620 PRELPP51888 382 aa13.11□□□□□ -0.31
TREM1-207ENST00000591620 IFIT5Q13325 482 aaKnown RBP13.11□□□□□ -0.31
TREM1-207ENST00000591620 PUS3Q9BZE2 481 aaKnown RBP13.11□□□□□ -0.31
TREM1-207ENST00000591620 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
TREM1-207ENST00000591620 BBOX1O75936 387 aa13.1□□□□□ -0.31
TREM1-207ENST00000591620 RASSF7Q02833 373 aa13.1□□□□□ -0.31
TREM1-207ENST00000591620 ANKRD18AQ8IVF6 992 aa13.1□□□□□ -0.31
TREM1-207ENST00000591620 MTX1Q13505 466 aa13.1□□□□□ -0.31
TREM1-207ENST00000591620 CCDC57Q2TAC2 916 aa13.1□□□□□ -0.31
TREM1-207ENST00000591620 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
TREM1-207ENST00000591620 PA2G4Q9UQ80 394 aaKnown RBP13.1□□□□□ -0.31
TREM1-207ENST00000591620 PTPN12Q05209 780 aaKnown RBP13.09□□□□□ -0.31
TREM1-207ENST00000591620 LRRC24Q50LG9 513 aa13.09□□□□□ -0.31
TREM1-207ENST00000591620 CEP85Q6P2H3 762 aa13.09□□□□□ -0.31
TREM1-207ENST00000591620 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
TREM1-207ENST00000591620 SRGAP3O43295 1099 aa13.08□□□□□ -0.31
TREM1-207ENST00000591620 SIRT2Q8IXJ6 389 aa13.08□□□□□ -0.31
TREM1-207ENST00000591620 EXOC6Q8TAG9 804 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms