RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 TNNQ9UQP3 1299 aa20.31■□□□□ 0.84
PRKCSH-213ENST00000591510 RTL9Q8NET4 1388 aa20.31■□□□□ 0.84
PRKCSH-213ENST00000591510 GRM8O00222 908 aa20.3■□□□□ 0.84
PRKCSH-213ENST00000591510 TRIM27P14373 513 aa20.3■□□□□ 0.84
PRKCSH-213ENST00000591510 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
PRKCSH-213ENST00000591510 LTBP1Q14766 1721 aa20.3■□□□□ 0.84
PRKCSH-213ENST00000591510 HSP90B1P14625 803 aaKnown RBP20.29■□□□□ 0.84
PRKCSH-213ENST00000591510 GRAPQ13588 217 aa20.29■□□□□ 0.84
PRKCSH-213ENST00000591510 TTLL11Q8NHH1 800 aa20.29■□□□□ 0.84
PRKCSH-213ENST00000591510 GRAPLQ8TC17 118 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-213ENST00000591510 KAZALD1Q96I82 304 aa20.29■□□□□ 0.84
PRKCSH-213ENST00000591510 LTBP3Q9NS15 1303 aa20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 FOXO4P98177 505 aa20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 RASSF7Q02833 373 aa20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 EPHA10Q5JZY3 1008 aa20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 ATF7IPQ6VMQ6 1270 aa20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 ARHGAP27Q6ZUM4 889 aa20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 CELF1Q92879 486 aaKnown RBP20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 USP44Q9H0E7 712 aa20.28■□□□□ 0.84
PRKCSH-213ENST00000591510 DUOX1Q9NRD9 1551 aa20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 PPEF1O14829 653 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 CSF1RP07333 972 aa20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 NBPF7P0C2Y1 421 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 DDX46Q7L014 1031 aaKnown RBP20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 SEC31BQ9NQW1 1179 aa20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-213ENST00000591510 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
PRKCSH-213ENST00000591510 DICER1Q9UPY3 1922 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-213ENST00000591510 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
PRKCSH-213ENST00000591510 SOGA3Q5TF21 947 aa20.26■□□□□ 0.83
PRKCSH-213ENST00000591510 ATP6V0A2Q9Y487 856 aa20.26■□□□□ 0.83
PRKCSH-213ENST00000591510 BBOX1O75936 387 aa20.25■□□□□ 0.83
PRKCSH-213ENST00000591510 CCT4P50991 539 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-213ENST00000591510 CCDC93Q567U6 631 aa20.25■□□□□ 0.83
PRKCSH-213ENST00000591510 SUCLG2Q96I99 432 aa20.25■□□□□ 0.83
PRKCSH-213ENST00000591510 GREM2Q9H772 168 aa20.25■□□□□ 0.83
PRKCSH-213ENST00000591510 IPO8O15397 1037 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-213ENST00000591510 CC2D2BQ6DHV5 1058 aa20.24■□□□□ 0.83
PRKCSH-213ENST00000591510 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
PRKCSH-213ENST00000591510 SPEF2Q9C093 1822 aa20.23■□□□□ 0.83
PRKCSH-213ENST00000591510 TIAM2Q8IVF5 1701 aa20.23■□□□□ 0.83
PRKCSH-213ENST00000591510 SP8Q8IXZ3 490 aa20.23■□□□□ 0.83
PRKCSH-213ENST00000591510 FRAT1Q92837 279 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-213ENST00000591510 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-213ENST00000591510 C9orf78Q9NZ63 289 aaPredicted RBP20.23■□□□□ 0.83
PRKCSH-213ENST00000591510 COL4A5P29400 1685 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 RLBP1P12271 317 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 RPS8P62241 208 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 FKBP4Q02790 459 aaKnown RBP eCLIP20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 FAM161AQ3B820 660 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 RABL6Q3YEC7 729 aaPredicted RBP20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 TMC4Q7Z404 712 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 RTKN2Q8IZC4 609 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 ANKRD44Q8N8A2 993 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 PSMD1Q99460 953 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 TAOK3Q9H2K8 898 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 RCAN3Q9UKA8 241 aa20.22■□□□□ 0.83
PRKCSH-213ENST00000591510 RTFDC1Q9BY42 306 aaPredicted RBP20.21■□□□□ 0.83
PRKCSH-213ENST00000591510 LMNB1P20700 586 aa20.2■□□□□ 0.82
PRKCSH-213ENST00000591510 C9orf131Q5VYM1 1079 aa20.2■□□□□ 0.82
PRKCSH-213ENST00000591510 A0A1B0GUL6 1792 aa20.2■□□□□ 0.82
PRKCSH-213ENST00000591510 ITGA6P23229 1130 aa20.19■□□□□ 0.82
PRKCSH-213ENST00000591510 YY1P25490 414 aa20.19■□□□□ 0.82
PRKCSH-213ENST00000591510 GRIPAP1Q4V328 841 aa20.19■□□□□ 0.82
PRKCSH-213ENST00000591510 LMBR1LQ6UX01 489 aa20.19■□□□□ 0.82
PRKCSH-213ENST00000591510 CLUAP1Q96AJ1 413 aa20.19■□□□□ 0.82
PRKCSH-213ENST00000591510 MEIS3Q99687 375 aa20.19■□□□□ 0.82
PRKCSH-213ENST00000591510 TMEM57Q8N5G2 664 aa20.18■□□□□ 0.82
PRKCSH-213ENST00000591510 BICC1Q9H694 974 aaKnown RBP20.18■□□□□ 0.82
PRKCSH-213ENST00000591510 CDC5LQ99459 802 aaKnown RBP20.17■□□□□ 0.82
PRKCSH-213ENST00000591510 RNF181Q9P0P0 153 aa20.17■□□□□ 0.82
PRKCSH-213ENST00000591510 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
PRKCSH-213ENST00000591510 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-213ENST00000591510 BSDC1Q9NW68 430 aaPredicted RBP20.16■□□□□ 0.82
PRKCSH-213ENST00000591510 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
PRKCSH-213ENST00000591510 GPSM2P81274 684 aa20.15■□□□□ 0.82
PRKCSH-213ENST00000591510 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
PRKCSH-213ENST00000591510 PODXL2Q9NZ53 605 aa20.15■□□□□ 0.82
PRKCSH-213ENST00000591510 MPNDQ8N594 471 aa20.14■□□□□ 0.81
PRKCSH-213ENST00000591510 UBTFL1P0CB47 393 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-213ENST00000591510 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
PRKCSH-213ENST00000591510 DPP8Q6V1X1 898 aaPredicted RBP20.13■□□□□ 0.81
PRKCSH-213ENST00000591510 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
PRKCSH-213ENST00000591510 POLLQ9UGP5 575 aa20.13■□□□□ 0.81
PRKCSH-213ENST00000591510 MINPP1Q9UNW1 487 aa20.13■□□□□ 0.81
PRKCSH-213ENST00000591510 ANKRD18BA2A2Z9 1011 aa20.12■□□□□ 0.81
PRKCSH-213ENST00000591510 PLIN1O60240 522 aa20.12■□□□□ 0.81
PRKCSH-213ENST00000591510 RFX5P48382 616 aaPredicted RBP20.12■□□□□ 0.81
PRKCSH-213ENST00000591510 IFIT5Q13325 482 aaKnown RBP20.12■□□□□ 0.81
PRKCSH-213ENST00000591510 ZNF784Q8NCA9 323 aaPredicted RBP20.12■□□□□ 0.81
PRKCSH-213ENST00000591510 LRRFIP2Q9Y608 721 aaKnown RBP20.12■□□□□ 0.81
PRKCSH-213ENST00000591510 GNAI3P08754 354 aa20.11■□□□□ 0.81
PRKCSH-213ENST00000591510 ZNF594Q96JF6 807 aaPredicted RBP20.11■□□□□ 0.81
PRKCSH-213ENST00000591510 WTIPA6NIX2 430 aaPredicted RBP20.1■□□□□ 0.81
PRKCSH-213ENST00000591510 IGHMBP2P38935 993 aaKnown RBP20.1■□□□□ 0.81
PRKCSH-213ENST00000591510 KIAA2012Q0VF49 1180 aa20.1■□□□□ 0.81
PRKCSH-213ENST00000591510 MTX1Q13505 466 aa20.1■□□□□ 0.81
PRKCSH-213ENST00000591510 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms