RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 KIAA2012Q0VF49 1180 aa24.83■■□□□ 1.56
ZNF554-203ENST00000590116 LMTK3Q96Q04 1460 aa24.82■■□□□ 1.56
ZNF554-203ENST00000590116 ANKRD13DQ6ZTN6 518 aa24.81■■□□□ 1.56
ZNF554-203ENST00000590116 SEC62Q99442 399 aaKnown RBP24.81■■□□□ 1.56
ZNF554-203ENST00000590116 DNAJC2Q99543 621 aaKnown RBP24.81■■□□□ 1.56
ZNF554-203ENST00000590116 MRC1P22897 1456 aa24.81■■□□□ 1.56
ZNF554-203ENST00000590116 AP5Z1O43299 807 aa24.81■■□□□ 1.56
ZNF554-203ENST00000590116 ANKRD1Q15327 319 aa24.81■■□□□ 1.56
ZNF554-203ENST00000590116 PROSER2Q86WR7 435 aaPredicted RBP24.81■■□□□ 1.56
ZNF554-203ENST00000590116 CABLES1Q8TDN4 633 aa24.81■■□□□ 1.56
ZNF554-203ENST00000590116 TAF5LO75529 589 aa24.8■■□□□ 1.56
ZNF554-203ENST00000590116 LRP10Q7Z4F1 713 aa24.8■■□□□ 1.56
ZNF554-203ENST00000590116 AFDNP55196 1824 aaKnown RBP24.8■■□□□ 1.56
ZNF554-203ENST00000590116 TATP17735 454 aaPredicted RBP24.8■■□□□ 1.56
ZNF554-203ENST00000590116 PTPN12Q05209 780 aaKnown RBP24.8■■□□□ 1.56
ZNF554-203ENST00000590116 TNNI3KQ59H18 835 aa24.8■■□□□ 1.56
ZNF554-203ENST00000590116 FPGT-TNNI3KV9GXZ4 949 aa24.8■■□□□ 1.56
ZNF554-203ENST00000590116 LIG1P18858 919 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 RFX5P48382 616 aaPredicted RBP24.79■■□□□ 1.56
ZNF554-203ENST00000590116 KRT85P78386 507 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 CAMK4Q16566 473 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 C1orf167Q5SNV9 1468 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 CSB-PGBD3P0DP91 1061 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 PDCP20941 246 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 CHRNA2Q15822 529 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 COPRSQ9NQ92 184 aa24.79■■□□□ 1.56
ZNF554-203ENST00000590116 KDM4AO75164 1064 aa24.78■■□□□ 1.56
ZNF554-203ENST00000590116 DBNDD2Q9BQY9 259 aa24.78■■□□□ 1.56
ZNF554-203ENST00000590116 HMG20BQ9P0W2 317 aa24.78■■□□□ 1.56
ZNF554-203ENST00000590116 TFIP11Q9UBB9 837 aaKnown RBP24.78■■□□□ 1.56
ZNF554-203ENST00000590116 JAK2O60674 1132 aa24.78■■□□□ 1.56
ZNF554-203ENST00000590116 TTC5Q8N0Z6 440 aa24.78■■□□□ 1.56
ZNF554-203ENST00000590116 DDX46Q7L014 1031 aaKnown RBP24.77■■□□□ 1.56
ZNF554-203ENST00000590116 JCADQ9P266 1359 aa24.77■■□□□ 1.56
ZNF554-203ENST00000590116 ZNF609O15014 1411 aa24.77■■□□□ 1.56
ZNF554-203ENST00000590116 SNRPA1P09661 255 aaKnown RBP24.77■■□□□ 1.56
ZNF554-203ENST00000590116 ATP5JP18859 108 aa24.77■■□□□ 1.56
ZNF554-203ENST00000590116 SLFNL1Q499Z3 407 aa24.77■■□□□ 1.56
ZNF554-203ENST00000590116 FAM13BQ9NYF5 915 aa24.77■■□□□ 1.56
ZNF554-203ENST00000590116 CYP27B1O15528 508 aa24.76■■□□□ 1.55
ZNF554-203ENST00000590116 IFNL2Q8IZJ0 200 aa24.76■■□□□ 1.55
ZNF554-203ENST00000590116 LRRC2Q9BYS8 371 aa24.76■■□□□ 1.55
ZNF554-203ENST00000590116 A0A087WZG4 1122 aa24.75■■□□□ 1.55
ZNF554-203ENST00000590116 ALDH8A1Q9H2A2 487 aaPredicted RBP24.75■■□□□ 1.55
ZNF554-203ENST00000590116 PDIA4P13667 645 aaKnown RBP24.75■■□□□ 1.55
ZNF554-203ENST00000590116 TSGA10IPQ3SY00 556 aa24.75■■□□□ 1.55
ZNF554-203ENST00000590116 ALS2Q96Q42 1657 aa24.75■■□□□ 1.55
ZNF554-203ENST00000590116 ARFGEF2Q9Y6D5 1785 aa24.74■■□□□ 1.55
ZNF554-203ENST00000590116 DNTTIP2Q5QJE6 756 aaKnown RBP24.74■■□□□ 1.55
ZNF554-203ENST00000590116 USPL1Q5W0Q7 1092 aa24.74■■□□□ 1.55
ZNF554-203ENST00000590116 CCDC192P0DO97 292 aa24.73■■□□□ 1.55
ZNF554-203ENST00000590116 SASS6Q6UVJ0 657 aa24.73■■□□□ 1.55
ZNF554-203ENST00000590116 CKAP2LQ8IYA6 745 aa24.73■■□□□ 1.55
ZNF554-203ENST00000590116 DDX11Q96FC9 970 aa24.73■■□□□ 1.55
ZNF554-203ENST00000590116 ELP1O95163 1332 aa24.73■■□□□ 1.55
ZNF554-203ENST00000590116 RABL6Q3YEC7 729 aaPredicted RBP24.72■■□□□ 1.55
ZNF554-203ENST00000590116 GLIPR1L2Q4G1C9 344 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 SPC24Q8NBT2 197 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 FMNL2Q96PY5 1086 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 KIF1AQ12756 1690 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 HSP90B1P14625 803 aaKnown RBP24.72■■□□□ 1.55
ZNF554-203ENST00000590116 KRT32Q14532 448 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 Q6ZUG5 572 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 KLHL34Q8N239 644 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 PIBF1Q8WXW3 757 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 NEK1Q96PY6 1258 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 NUP62CLQ9H1M0 184 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 PDCL3Q9H2J4 239 aa24.72■■□□□ 1.55
ZNF554-203ENST00000590116 CYP21A2P08686 494 aa24.71■■□□□ 1.55
ZNF554-203ENST00000590116 LMBR1LQ6UX01 489 aa24.71■■□□□ 1.55
ZNF554-203ENST00000590116 DCAF5Q96JK2 942 aa24.71■■□□□ 1.55
ZNF554-203ENST00000590116 SPATA32Q96LK8 384 aa24.71■■□□□ 1.55
ZNF554-203ENST00000590116 DACT1Q9NYF0 836 aa24.71■■□□□ 1.55
ZNF554-203ENST00000590116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.71■■□□□ 1.55
ZNF554-203ENST00000590116 FOSBP53539 338 aa24.71■■□□□ 1.55
ZNF554-203ENST00000590116 C19orf44Q9H6X5 657 aa24.71■■□□□ 1.55
ZNF554-203ENST00000590116 GTF3C6Q969F1 213 aa24.7■■□□□ 1.54
ZNF554-203ENST00000590116 SCAND2PQ9GZW5 306 aaPredicted RBP24.7■■□□□ 1.54
ZNF554-203ENST00000590116 GOLGA6L4A6NEF3 574 aa24.7■■□□□ 1.54
ZNF554-203ENST00000590116 MAP3K11Q16584 847 aa24.7■■□□□ 1.54
ZNF554-203ENST00000590116 NOLC1Q14978 699 aaKnown RBP eCLIP24.69■■□□□ 1.54
ZNF554-203ENST00000590116 LEO1Q8WVC0 666 aaPredicted RBP24.69■■□□□ 1.54
ZNF554-203ENST00000590116 BRF1Q92994 677 aa24.69■■□□□ 1.54
ZNF554-203ENST00000590116 MRVI1Q9Y6F6 885 aa24.69■■□□□ 1.54
ZNF554-203ENST00000590116 STOX1Q6ZVD7 989 aa24.69■■□□□ 1.54
ZNF554-203ENST00000590116 HAUS7Q99871 368 aa24.69■■□□□ 1.54
ZNF554-203ENST00000590116 MST1RQ04912 1400 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 A0A0G2JLW4 131 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 CASP7P55210 303 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 CABP4P57796 275 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 TYRO3Q06418 890 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 MCMDC2Q4G0Z9 681 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 LUZP1Q86V48 1076 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 U3KPZ7 1027 aaPredicted RBP24.68■■□□□ 1.54
ZNF554-203ENST00000590116 PPFIA3O75145 1194 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 NEUROD6Q96NK8 337 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 KCNF1Q9H3M0 494 aa24.68■■□□□ 1.54
ZNF554-203ENST00000590116 ARID3AQ99856 593 aa24.67■■□□□ 1.54
ZNF554-203ENST00000590116 COL18A1P39060 1754 aa24.67■■□□□ 1.54
ZNF554-203ENST00000590116 GOLIM4O00461 696 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms