RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 CTSWP56202 376 aa15.37■□□□□ 0.05
GPATCH1-202ENST00000590062 TTLL6Q8N841 843 aa15.37■□□□□ 0.05
GPATCH1-202ENST00000590062 JARID2Q92833 1246 aaPredicted RBP15.37■□□□□ 0.05
GPATCH1-202ENST00000590062 ARFGEF1Q9Y6D6 1849 aa15.37■□□□□ 0.05
GPATCH1-202ENST00000590062 CACNA1SQ13698 1873 aa15.37■□□□□ 0.05
GPATCH1-202ENST00000590062 GRIN3BO60391 1043 aa15.36■□□□□ 0.05
GPATCH1-202ENST00000590062 PANK1Q8TE04 598 aa15.36■□□□□ 0.05
GPATCH1-202ENST00000590062 KAZALD1Q96I82 304 aa15.36■□□□□ 0.05
GPATCH1-202ENST00000590062 CRAMP1Q96RY5 1269 aa15.36■□□□□ 0.05
GPATCH1-202ENST00000590062 CSF1RP07333 972 aa15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 FOXO4P98177 505 aa15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 RABL6Q3YEC7 729 aaPredicted RBP15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 TTLL11Q8NHH1 800 aa15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 RBM17Q96I25 401 aaKnown RBP15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 MEIS3Q99687 375 aa15.35■□□□□ 0.05
GPATCH1-202ENST00000590062 GNAI3P08754 354 aa15.34■□□□□ 0.05
GPATCH1-202ENST00000590062 UBTFL1P0CB47 393 aaPredicted RBP15.34■□□□□ 0.05
GPATCH1-202ENST00000590062 YBX3P16989 372 aaKnown RBP eCLIP15.34■□□□□ 0.05
GPATCH1-202ENST00000590062 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
GPATCH1-202ENST00000590062 CCDC152Q4G0S7 254 aa15.34■□□□□ 0.05
GPATCH1-202ENST00000590062 ITPRIPQ8IWB1 547 aa15.34■□□□□ 0.05
GPATCH1-202ENST00000590062 HDAC5Q9UQL6 1122 aa15.34■□□□□ 0.05
GPATCH1-202ENST00000590062 ZBTB7BO15156 539 aaPredicted RBP15.33■□□□□ 0.04
GPATCH1-202ENST00000590062 EPHA10Q5JZY3 1008 aa15.33■□□□□ 0.04
GPATCH1-202ENST00000590062 C20orf194Q5TEA3 1177 aa15.33■□□□□ 0.04
GPATCH1-202ENST00000590062 PRPF40BQ6NWY9 871 aaKnown RBP15.33■□□□□ 0.04
GPATCH1-202ENST00000590062 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
GPATCH1-202ENST00000590062 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
GPATCH1-202ENST00000590062 ANKRD44Q8N8A2 993 aa15.32■□□□□ 0.04
GPATCH1-202ENST00000590062 DDX19BQ9UMR2 479 aa15.32■□□□□ 0.04
GPATCH1-202ENST00000590062 GRAPQ13588 217 aa15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 GRAPLQ8TC17 118 aaPredicted RBP15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 BICC1Q9H694 974 aaKnown RBP15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 GREM2Q9H772 168 aa15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 COG6Q9Y2V7 657 aa15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 COL4A1P02462 1669 aa15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 SLX4Q8IY92 1834 aa15.31■□□□□ 0.04
GPATCH1-202ENST00000590062 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
GPATCH1-202ENST00000590062 LMBR1LQ6UX01 489 aa15.3■□□□□ 0.04
GPATCH1-202ENST00000590062 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
GPATCH1-202ENST00000590062 CHMP4BQ9H444 224 aaKnown RBP15.3■□□□□ 0.04
GPATCH1-202ENST00000590062 LRRFIP2Q9Y608 721 aaKnown RBP15.3■□□□□ 0.04
GPATCH1-202ENST00000590062 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 PPEF1O14829 653 aaPredicted RBP15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 C21orf2O43822 256 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 BBOX1O75936 387 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 GNAI2P04899 355 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 MTX1Q13505 466 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 TMC4Q7Z404 712 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 CELF1Q92879 486 aaKnown RBP15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 CDC5LQ99459 802 aaKnown RBP15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 SUPT16HQ9Y5B9 1047 aaKnown RBP15.29■□□□□ 0.04
GPATCH1-202ENST00000590062 ITGA6P23229 1130 aa15.28■□□□□ 0.04
GPATCH1-202ENST00000590062 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
GPATCH1-202ENST00000590062 ARHGAP27Q6ZUM4 889 aa15.28■□□□□ 0.04
GPATCH1-202ENST00000590062 ZBTB40Q9NUA8 1239 aa15.28■□□□□ 0.04
GPATCH1-202ENST00000590062 RPS8P62241 208 aaKnown RBP15.27■□□□□ 0.04
GPATCH1-202ENST00000590062 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.04
GPATCH1-202ENST00000590062 CCDC85AQ96PX6 553 aaPredicted RBP15.27■□□□□ 0.04
GPATCH1-202ENST00000590062 ATP6V0A2Q9Y487 856 aa15.27■□□□□ 0.04
GPATCH1-202ENST00000590062 TAF1P21675 1872 aa15.27■□□□□ 0.03
GPATCH1-202ENST00000590062 CHD4Q14839 1912 aa15.26■□□□□ 0.03
GPATCH1-202ENST00000590062 ANKRD18BA2A2Z9 1011 aa15.26■□□□□ 0.03
GPATCH1-202ENST00000590062 CCDC57Q2TAC2 916 aa15.26■□□□□ 0.03
GPATCH1-202ENST00000590062 GRIPAP1Q4V328 841 aa15.26■□□□□ 0.03
GPATCH1-202ENST00000590062 ANKRD18AQ8IVF6 992 aa15.26■□□□□ 0.03
GPATCH1-202ENST00000590062 CHMP3Q9Y3E7 222 aa15.26■□□□□ 0.03
GPATCH1-202ENST00000590062 RFX5P48382 616 aaPredicted RBP15.25■□□□□ 0.03
GPATCH1-202ENST00000590062 SP8Q8IXZ3 490 aa15.25■□□□□ 0.03
GPATCH1-202ENST00000590062 RTKN2Q8IZC4 609 aa15.25■□□□□ 0.03
GPATCH1-202ENST00000590062 TAOK3Q9H2K8 898 aa15.25■□□□□ 0.03
GPATCH1-202ENST00000590062 BSDC1Q9NW68 430 aaPredicted RBP15.25■□□□□ 0.03
GPATCH1-202ENST00000590062 FER1L6Q2WGJ9 1857 aa15.25■□□□□ 0.03
GPATCH1-202ENST00000590062 LTBP1Q14766 1721 aa15.24■□□□□ 0.03
GPATCH1-202ENST00000590062 CENPBP07199 599 aaPredicted RBP15.24■□□□□ 0.03
GPATCH1-202ENST00000590062 IGHMBP2P38935 993 aaKnown RBP15.24■□□□□ 0.03
GPATCH1-202ENST00000590062 GOLGB1Q14789 3259 aaKnown RBP15.24■□□□□ 0.03
GPATCH1-202ENST00000590062 LTBP3Q9NS15 1303 aa15.23■□□□□ 0.03
GPATCH1-202ENST00000590062 SPEF2Q9C093 1822 aa15.23■□□□□ 0.03
GPATCH1-202ENST00000590062 TAF7LQ5H9L4 462 aa15.23■□□□□ 0.03
GPATCH1-202ENST00000590062 C1orf115Q9H7X2 142 aa15.23■□□□□ 0.03
GPATCH1-202ENST00000590062 ATP8B2P98198 1209 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 FKBP4Q02790 459 aaKnown RBP eCLIP15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 RASSF7Q02833 373 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 PTPN12Q05209 780 aaKnown RBP15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 AAMPQ13685 434 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 POLA2Q14181 598 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 SLC51AQ86UW1 340 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 COPRSQ9NQ92 184 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
GPATCH1-202ENST00000590062 DUOX1Q9NRD9 1551 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms