RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 OTUD7AQ8TE49 926 aaPredicted RBP21.52■■□□□ 1.04
CXXC1-212ENST00000589940 LAMB2P55268 1798 aa21.52■■□□□ 1.03
CXXC1-212ENST00000589940 CARMIL3Q8ND23 1372 aa21.51■■□□□ 1.03
CXXC1-212ENST00000589940 NFIXQ14938 502 aa21.51■■□□□ 1.03
CXXC1-212ENST00000589940 ERFEQ4G0M1 354 aa21.51■■□□□ 1.03
CXXC1-212ENST00000589940 CCDC85AQ96PX6 553 aaPredicted RBP21.51■■□□□ 1.03
CXXC1-212ENST00000589940 DDX60Q8IY21 1712 aaKnown RBP21.51■■□□□ 1.03
CXXC1-212ENST00000589940 SASH1O94885 1247 aa21.51■■□□□ 1.03
CXXC1-212ENST00000589940 GREM2Q9H772 168 aa21.51■■□□□ 1.03
CXXC1-212ENST00000589940 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
CXXC1-212ENST00000589940 TPTE2Q6XPS3 522 aa21.5■■□□□ 1.03
CXXC1-212ENST00000589940 TUBGCP6Q96RT7 1819 aa21.5■■□□□ 1.03
CXXC1-212ENST00000589940 COL23A1Q86Y22 540 aaPredicted RBP21.49■■□□□ 1.03
CXXC1-212ENST00000589940 SALL3Q9BXA9 1300 aa21.49■■□□□ 1.03
CXXC1-212ENST00000589940 ITGA6P23229 1130 aa21.49■■□□□ 1.03
CXXC1-212ENST00000589940 SLC10A5Q5PT55 438 aa21.49■■□□□ 1.03
CXXC1-212ENST00000589940 DEFB132Q7Z7B7 95 aa21.49■■□□□ 1.03
CXXC1-212ENST00000589940 CCDC125Q86Z20 511 aa21.49■■□□□ 1.03
CXXC1-212ENST00000589940 CLASRPQ8N2M8 674 aaKnown RBP21.49■■□□□ 1.03
CXXC1-212ENST00000589940 ANKRD18BA2A2Z9 1011 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 ZNF594Q96JF6 807 aaPredicted RBP21.48■■□□□ 1.03
CXXC1-212ENST00000589940 ANO8Q9HCE9 1232 aaPredicted RBP21.48■■□□□ 1.03
CXXC1-212ENST00000589940 FBXO3Q9UK99 471 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 PNPLA7Q6ZV29 1317 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 ABCC12Q96J65 1359 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 EYA2O00167 538 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 CIAO1O76071 339 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 CCDC152Q4G0S7 254 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
CXXC1-212ENST00000589940 RTL9Q8NET4 1388 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 SLC15A2Q16348 729 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 OSBPL3Q9H4L5 887 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 MSH5O43196 834 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 MX1P20591 662 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 TM4SF1P30408 202 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 IL15P40933 162 aaPredicted RBP21.47■■□□□ 1.03
CXXC1-212ENST00000589940 ATG9AQ7Z3C6 839 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 STK32BQ9NY57 414 aa21.47■■□□□ 1.03
CXXC1-212ENST00000589940 PDE1AP54750 535 aa21.46■■□□□ 1.03
CXXC1-212ENST00000589940 BMP2KLQ5H9B9 411 aa21.46■■□□□ 1.03
CXXC1-212ENST00000589940 LRRC24Q50LG9 513 aa21.45■■□□□ 1.02
CXXC1-212ENST00000589940 NLGN1Q8N2Q7 840 aa21.45■■□□□ 1.02
CXXC1-212ENST00000589940 STAP2Q9UGK3 403 aa21.45■■□□□ 1.02
CXXC1-212ENST00000589940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.45■■□□□ 1.02
CXXC1-212ENST00000589940 NPHP1O15259 732 aa21.44■■□□□ 1.02
CXXC1-212ENST00000589940 TFCP2Q12800 502 aa21.44■■□□□ 1.02
CXXC1-212ENST00000589940 SF3B3Q15393 1217 aaKnown RBP21.44■■□□□ 1.02
CXXC1-212ENST00000589940 CNBD1Q8NA66 436 aa21.44■■□□□ 1.02
CXXC1-212ENST00000589940 TTC22Q5TAA0 569 aa21.44■■□□□ 1.02
CXXC1-212ENST00000589940 PUS3Q9BZE2 481 aaKnown RBP21.44■■□□□ 1.02
CXXC1-212ENST00000589940 C8orf34Q49A92 452 aa21.43■■□□□ 1.02
CXXC1-212ENST00000589940 C3orf67Q6ZVT6 689 aa21.43■■□□□ 1.02
CXXC1-212ENST00000589940 AACSQ86V21 672 aa21.43■■□□□ 1.02
CXXC1-212ENST00000589940 BACH2Q9BYV9 841 aa21.43■■□□□ 1.02
CXXC1-212ENST00000589940 TSHZ2Q9NRE2 1034 aa21.43■■□□□ 1.02
CXXC1-212ENST00000589940 AOX1Q06278 1338 aa21.43■■□□□ 1.02
CXXC1-212ENST00000589940 IFIT2P09913 472 aaKnown RBP21.43■■□□□ 1.02
CXXC1-212ENST00000589940 EAF2Q96CJ1 260 aaPredicted RBP21.43■■□□□ 1.02
CXXC1-212ENST00000589940 NLRP3Q96P20 1036 aa21.43■■□□□ 1.02
CXXC1-212ENST00000589940 SERPINB2P05120 415 aa21.42■■□□□ 1.02
CXXC1-212ENST00000589940 GSPT1P15170 499 aaKnown RBP21.42■■□□□ 1.02
CXXC1-212ENST00000589940 DDR1Q08345 913 aa21.42■■□□□ 1.02
CXXC1-212ENST00000589940 LDHAL6AQ6ZMR3 332 aa21.42■■□□□ 1.02
CXXC1-212ENST00000589940 LRP5O75197 1615 aa21.42■■□□□ 1.02
CXXC1-212ENST00000589940 POLRMTO00411 1230 aaKnown RBP21.41■■□□□ 1.02
CXXC1-212ENST00000589940 PRR5LQ6MZQ0 368 aa21.41■■□□□ 1.02
CXXC1-212ENST00000589940 TNNI3KQ59H18 835 aa21.41■■□□□ 1.02
CXXC1-212ENST00000589940 GPR108Q9NPR9 543 aa21.41■■□□□ 1.02
CXXC1-212ENST00000589940 SEC31BQ9NQW1 1179 aa21.41■■□□□ 1.02
CXXC1-212ENST00000589940 FPGT-TNNI3KV9GXZ4 949 aa21.41■■□□□ 1.02
CXXC1-212ENST00000589940 QSER1Q2KHR3 1735 aa21.41■■□□□ 1.02
CXXC1-212ENST00000589940 RIC1Q4ADV7 1423 aa21.41■■□□□ 1.02
CXXC1-212ENST00000589940 TSHZ3Q63HK5 1081 aa21.4■■□□□ 1.02
CXXC1-212ENST00000589940 CCDC24Q8N4L8 307 aa21.4■■□□□ 1.02
CXXC1-212ENST00000589940 RIPOR2Q9Y4F9 1068 aa21.4■■□□□ 1.02
CXXC1-212ENST00000589940 CNNM1Q9NRU3 951 aa21.4■■□□□ 1.02
CXXC1-212ENST00000589940 CEP126Q9P2H0 1117 aa21.4■■□□□ 1.02
CXXC1-212ENST00000589940 TTC41PQ6P2S7 1318 aa21.39■■□□□ 1.02
CXXC1-212ENST00000589940 GPATCH3Q96I76 525 aa21.39■■□□□ 1.01
CXXC1-212ENST00000589940 CDC5LQ99459 802 aaKnown RBP21.39■■□□□ 1.01
CXXC1-212ENST00000589940 ST5P78524 1137 aa21.39■■□□□ 1.01
CXXC1-212ENST00000589940 CCDC8Q9H0W5 538 aaPredicted RBP21.39■■□□□ 1.01
CXXC1-212ENST00000589940 IGHMBP2P38935 993 aaKnown RBP21.38■■□□□ 1.01
CXXC1-212ENST00000589940 MPHOSPH8Q99549 860 aa21.37■■□□□ 1.01
CXXC1-212ENST00000589940 ECHDC1Q9NTX5 307 aa21.37■■□□□ 1.01
CXXC1-212ENST00000589940 CASZ1Q86V15 1759 aa21.37■■□□□ 1.01
CXXC1-212ENST00000589940 PI4K2BQ8TCG2 481 aa21.37■■□□□ 1.01
CXXC1-212ENST00000589940 TLR7Q9NYK1 1049 aaKnown RBP21.37■■□□□ 1.01
CXXC1-212ENST00000589940 TNRC6CQ9HCJ0 1690 aaKnown RBP21.36■■□□□ 1.01
CXXC1-212ENST00000589940 METTL24Q5JXM2 366 aa21.36■■□□□ 1.01
CXXC1-212ENST00000589940 ZNF609O15014 1411 aa21.36■■□□□ 1.01
CXXC1-212ENST00000589940 ERC2O15083 957 aa21.36■■□□□ 1.01
CXXC1-212ENST00000589940 DBNLQ9UJU6 430 aaKnown RBP21.36■■□□□ 1.01
CXXC1-212ENST00000589940 AKAP2Q9Y2D5 859 aa21.36■■□□□ 1.01
CXXC1-212ENST00000589940 MROH5Q6ZUA9 1318 aa21.36■■□□□ 1.01
CXXC1-212ENST00000589940 MMP10P09238 476 aa21.35■■□□□ 1.01
CXXC1-212ENST00000589940 GLRX3O76003 335 aaKnown RBP21.35■■□□□ 1.01
CXXC1-212ENST00000589940 SDSP20132 328 aa21.35■■□□□ 1.01
CXXC1-212ENST00000589940 ANKRD18AQ8IVF6 992 aa21.35■■□□□ 1.01
CXXC1-212ENST00000589940 MSL1Q68DK7 614 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms