RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 ANXA1P04083 346 aa23.68■■□□□ 1.38
CXXC1-211ENST00000589548 NEFMP07197 916 aa23.68■■□□□ 1.38
CXXC1-211ENST00000589548 HIRAP54198 1017 aaPredicted RBP23.68■■□□□ 1.38
CXXC1-211ENST00000589548 SHTN1A0MZ66 631 aa23.67■■□□□ 1.38
CXXC1-211ENST00000589548 SUPT20HQ8NEM7 779 aa23.67■■□□□ 1.38
CXXC1-211ENST00000589548 TRPM4Q8TD43 1214 aa23.67■■□□□ 1.38
CXXC1-211ENST00000589548 CDHR2Q9BYE9 1310 aa23.66■■□□□ 1.38
CXXC1-211ENST00000589548 RAD17O75943 681 aa23.66■■□□□ 1.38
CXXC1-211ENST00000589548 KIAA2012Q0VF49 1180 aa23.66■■□□□ 1.38
CXXC1-211ENST00000589548 CIAPIN1Q6FI81 312 aa23.66■■□□□ 1.38
CXXC1-211ENST00000589548 DPP8Q6V1X1 898 aaPredicted RBP23.66■■□□□ 1.38
CXXC1-211ENST00000589548 SP8Q8IXZ3 490 aa23.66■■□□□ 1.38
CXXC1-211ENST00000589548 YDJCA8MPS7 323 aa23.65■■□□□ 1.38
CXXC1-211ENST00000589548 HCLS1P14317 486 aaPredicted RBP23.65■■□□□ 1.38
CXXC1-211ENST00000589548 EIF2S2P20042 333 aaKnown RBP23.65■■□□□ 1.38
CXXC1-211ENST00000589548 MPNDQ8N594 471 aa23.65■■□□□ 1.38
CXXC1-211ENST00000589548 HHIPL1Q96JK4 782 aa23.65■■□□□ 1.38
CXXC1-211ENST00000589548 TMX4Q9H1E5 349 aaPredicted RBP23.65■■□□□ 1.38
CXXC1-211ENST00000589548 TSPYL4Q9UJ04 414 aa23.65■■□□□ 1.38
CXXC1-211ENST00000589548 COL4A1P02462 1669 aa23.64■■□□□ 1.38
CXXC1-211ENST00000589548 ZNF408Q9H9D4 720 aa23.64■■□□□ 1.37
CXXC1-211ENST00000589548 BBOX1O75936 387 aa23.63■■□□□ 1.37
CXXC1-211ENST00000589548 BRPF1P55201 1214 aaPredicted RBP23.63■■□□□ 1.37
CXXC1-211ENST00000589548 NLRP10Q86W26 655 aa23.63■■□□□ 1.37
CXXC1-211ENST00000589548 ZIC5Q96T25 663 aa23.63■■□□□ 1.37
CXXC1-211ENST00000589548 BCL2L13Q9BXK5 485 aa23.63■■□□□ 1.37
CXXC1-211ENST00000589548 MCOLN1Q9GZU1 580 aa23.63■■□□□ 1.37
CXXC1-211ENST00000589548 ZC3H15Q8WU90 426 aaKnown RBP23.62■■□□□ 1.37
CXXC1-211ENST00000589548 CA12O43570 354 aa23.61■■□□□ 1.37
CXXC1-211ENST00000589548 DLK2Q6UY11 383 aa23.61■■□□□ 1.37
CXXC1-211ENST00000589548 MAPK8IP3Q9UPT6 1336 aa23.6■■□□□ 1.37
CXXC1-211ENST00000589548 GRAPQ13588 217 aa23.6■■□□□ 1.37
CXXC1-211ENST00000589548 TNIP1Q15025 636 aa23.6■■□□□ 1.37
CXXC1-211ENST00000589548 GRAPLQ8TC17 118 aaPredicted RBP23.6■■□□□ 1.37
CXXC1-211ENST00000589548 CNOT7Q9UIV1 285 aaKnown RBP23.6■■□□□ 1.37
CXXC1-211ENST00000589548 CDC37L1Q7L3B6 337 aa23.59■■□□□ 1.37
CXXC1-211ENST00000589548 COPS6Q7L5N1 327 aa23.59■■□□□ 1.37
CXXC1-211ENST00000589548 XAGE3Q8WTP9 111 aa23.59■■□□□ 1.37
CXXC1-211ENST00000589548 NECTIN2Q92692 538 aa23.59■■□□□ 1.37
CXXC1-211ENST00000589548 SCN9AQ15858 1988 aa23.58■■□□□ 1.37
CXXC1-211ENST00000589548 TNRC18O15417 2968 aaPredicted RBP23.58■■□□□ 1.37
CXXC1-211ENST00000589548 AIMP1Q12904 312 aaKnown RBP23.58■■□□□ 1.37
CXXC1-211ENST00000589548 DDX46Q7L014 1031 aaKnown RBP23.58■■□□□ 1.37
CXXC1-211ENST00000589548 MICALL2Q8IY33 904 aa23.58■■□□□ 1.37
CXXC1-211ENST00000589548 ZNF428Q96B54 188 aa23.58■■□□□ 1.37
CXXC1-211ENST00000589548 TCIRG1Q13488 830 aa23.57■■□□□ 1.36
CXXC1-211ENST00000589548 HSP90AB3PQ58FF7 597 aa23.57■■□□□ 1.36
CXXC1-211ENST00000589548 USP48Q86UV5 1035 aa23.57■■□□□ 1.36
CXXC1-211ENST00000589548 TRMT112Q9UI30 125 aaKnown RBP23.57■■□□□ 1.36
CXXC1-211ENST00000589548 ZBTB12Q9Y330 459 aaPredicted RBP23.57■■□□□ 1.36
CXXC1-211ENST00000589548 SH3TC1Q8TE82 1336 aa23.57■■□□□ 1.36
CXXC1-211ENST00000589548 SAMD7Q7Z3H4 446 aa23.56■■□□□ 1.36
CXXC1-211ENST00000589548 CFAP44Q96MT7 982 aa23.56■■□□□ 1.36
CXXC1-211ENST00000589548 AKAP11Q9UKA4 1901 aa23.56■■□□□ 1.36
CXXC1-211ENST00000589548 EGFRP00533 1210 aa23.55■■□□□ 1.36
CXXC1-211ENST00000589548 HUNKP57058 714 aa23.55■■□□□ 1.36
CXXC1-211ENST00000589548 NOGQ13253 232 aa23.55■■□□□ 1.36
CXXC1-211ENST00000589548 DGKZQ13574 1117 aa23.55■■□□□ 1.36
CXXC1-211ENST00000589548 H7C1D1 291 aa23.54■■□□□ 1.36
CXXC1-211ENST00000589548 PSMD14O00487 310 aa23.54■■□□□ 1.36
CXXC1-211ENST00000589548 RIPK4P57078 832 aa23.54■■□□□ 1.36
CXXC1-211ENST00000589548 KRT24Q2M2I5 525 aa23.54■■□□□ 1.36
CXXC1-211ENST00000589548 DBNDD1Q9H9R9 158 aa23.54■■□□□ 1.36
CXXC1-211ENST00000589548 FAM155AB1AL88 458 aaPredicted RBP23.53■■□□□ 1.36
CXXC1-211ENST00000589548 DPF2Q92785 391 aa23.53■■□□□ 1.36
CXXC1-211ENST00000589548 PNNQ9H307 717 aaKnown RBP23.53■■□□□ 1.36
CXXC1-211ENST00000589548 BABAM1Q9NWV8 329 aa23.53■■□□□ 1.36
CXXC1-211ENST00000589548 TBC1D10BQ4KMP7 808 aaPredicted RBP23.52■■□□□ 1.36
CXXC1-211ENST00000589548 TMC4Q7Z404 712 aa23.52■■□□□ 1.36
CXXC1-211ENST00000589548 CELF1Q92879 486 aaKnown RBP23.52■■□□□ 1.36
CXXC1-211ENST00000589548 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
CXXC1-211ENST00000589548 KCNQ5Q9NR82 932 aa23.51■■□□□ 1.35
CXXC1-211ENST00000589548 PSME4Q14997 1843 aa23.5■■□□□ 1.35
CXXC1-211ENST00000589548 ADM5C9JUS6 153 aa23.5■■□□□ 1.35
CXXC1-211ENST00000589548 WASHC4Q2M389 1173 aa23.5■■□□□ 1.35
CXXC1-211ENST00000589548 KRT26Q7Z3Y9 468 aa23.5■■□□□ 1.35
CXXC1-211ENST00000589548 POLLQ9UGP5 575 aa23.5■■□□□ 1.35
CXXC1-211ENST00000589548 RIMBP2O15034 1052 aa23.49■■□□□ 1.35
CXXC1-211ENST00000589548 TMPOP42166 694 aaKnown RBP23.49■■□□□ 1.35
CXXC1-211ENST00000589548 GPSM2P81274 684 aa23.49■■□□□ 1.35
CXXC1-211ENST00000589548 RGMBQ6NW40 437 aa23.49■■□□□ 1.35
CXXC1-211ENST00000589548 GBA2Q9HCG7 927 aaPredicted RBP23.49■■□□□ 1.35
CXXC1-211ENST00000589548 CHPF2Q9P2E5 772 aa23.49■■□□□ 1.35
CXXC1-211ENST00000589548 NSFL1CQ9UNZ2 370 aaKnown RBP23.49■■□□□ 1.35
CXXC1-211ENST00000589548 SF3B3Q15393 1217 aaKnown RBP23.48■■□□□ 1.35
CXXC1-211ENST00000589548 ISCA1Q9BUE6 129 aa23.48■■□□□ 1.35
CXXC1-211ENST00000589548 ECE2O60344 883 aa23.47■■□□□ 1.35
CXXC1-211ENST00000589548 FAM89AQ96GI7 184 aa23.47■■□□□ 1.35
CXXC1-211ENST00000589548 DOK7Q18PE1 504 aa23.46■■□□□ 1.35
CXXC1-211ENST00000589548 RBM26Q5T8P6 1007 aaKnown RBP23.46■■□□□ 1.35
CXXC1-211ENST00000589548 PLBD2Q8NHP8 589 aa23.46■■□□□ 1.35
CXXC1-211ENST00000589548 ASTN2O75129 1339 aaPredicted RBP23.45■■□□□ 1.34
CXXC1-211ENST00000589548 ATP5J2-PTCD1G3V325 749 aa23.45■■□□□ 1.34
CXXC1-211ENST00000589548 C6orf229H3BNL8 230 aa23.45■■□□□ 1.34
CXXC1-211ENST00000589548 CHL1O00533 1208 aa23.45■■□□□ 1.34
CXXC1-211ENST00000589548 RPS12P25398 132 aaKnown RBP23.45■■□□□ 1.34
CXXC1-211ENST00000589548 KIF23Q02241 960 aaPredicted RBP23.45■■□□□ 1.34
CXXC1-211ENST00000589548 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
CXXC1-211ENST00000589548 C2orf69Q8N8R5 385 aa23.44■■□□□ 1.34
CXXC1-211ENST00000589548 DCPSQ96C86 337 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms