RNA–Protein interactions for RNA: ENST00000589466.1

LINC00906-204, long intergenic non-protein coding RNA 906, humanhuman

TSL 3

Gene LINC00906, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-204ENST00000589466 TRIM47Q96LD4 638 aa8.36□□□□□ -1.07
LINC00906-204ENST00000589466 TNS1Q9HBL0 1735 aaKnown RBP8.36□□□□□ -1.07
LINC00906-204ENST00000589466 COL3A1P02461 1466 aaPredicted RBP8.36□□□□□ -1.07
LINC00906-204ENST00000589466 IGSF1Q8N6C5 1336 aa8.35□□□□□ -1.07
LINC00906-204ENST00000589466 MS4A1P11836 297 aa8.35□□□□□ -1.07
LINC00906-204ENST00000589466 TATP17735 454 aaPredicted RBP8.35□□□□□ -1.07
LINC00906-204ENST00000589466 IL13P35225 146 aa8.35□□□□□ -1.07
LINC00906-204ENST00000589466 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
LINC00906-204ENST00000589466 SF3B2Q13435 895 aaKnown RBP8.35□□□□□ -1.07
LINC00906-204ENST00000589466 ZCRB1Q8TBF4 217 aaKnown RBP8.35□□□□□ -1.07
LINC00906-204ENST00000589466 MAP2P11137 1827 aaKnown RBP8.35□□□□□ -1.07
LINC00906-204ENST00000589466 SHANK3Q9BYB0 1731 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 CYP27B1O15528 508 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 APBA3O96018 575 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 PPP2R1AP30153 589 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 BAG6P46379 1132 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 EZH2Q15910 746 aaKnown RBP8.34□□□□□ -1.07
LINC00906-204ENST00000589466 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
LINC00906-204ENST00000589466 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 ARID3AQ99856 593 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 STK17AQ9UEE5 414 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 PARD3Q8TEW0 1356 aa8.34□□□□□ -1.07
LINC00906-204ENST00000589466 BCL9O00512 1426 aa8.33□□□□□ -1.08
LINC00906-204ENST00000589466 HMOX1P09601 288 aa8.33□□□□□ -1.08
LINC00906-204ENST00000589466 RGPD1P0DJD0 1748 aa8.33□□□□□ -1.08
LINC00906-204ENST00000589466 MDM2Q00987 491 aaPredicted RBP8.33□□□□□ -1.08
LINC00906-204ENST00000589466 SULT6B1Q6IMI4 303 aa8.33□□□□□ -1.08
LINC00906-204ENST00000589466 TRAK2O60296 914 aa8.32□□□□□ -1.08
LINC00906-204ENST00000589466 CLCN1P35523 988 aa8.32□□□□□ -1.08
LINC00906-204ENST00000589466 SYTL4Q96C24 671 aaPredicted RBP8.32□□□□□ -1.08
LINC00906-204ENST00000589466 CAMKK2Q96RR4 588 aa8.32□□□□□ -1.08
LINC00906-204ENST00000589466 SENP2Q9HC62 589 aa8.32□□□□□ -1.08
LINC00906-204ENST00000589466 KDRP35968 1356 aa8.32□□□□□ -1.08
LINC00906-204ENST00000589466 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
LINC00906-204ENST00000589466 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
LINC00906-204ENST00000589466 U2SURPO15042 1029 aaKnown RBP8.31□□□□□ -1.08
LINC00906-204ENST00000589466 SIAH2O43255 324 aa8.31□□□□□ -1.08
LINC00906-204ENST00000589466 HOXA2O43364 376 aa8.31□□□□□ -1.08
LINC00906-204ENST00000589466 DIAPH1O60610 1272 aaKnown RBP8.31□□□□□ -1.08
LINC00906-204ENST00000589466 MCM6Q14566 821 aa8.31□□□□□ -1.08
LINC00906-204ENST00000589466 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
LINC00906-204ENST00000589466 PKD1L3Q7Z443 1732 aa8.31□□□□□ -1.08
LINC00906-204ENST00000589466 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
LINC00906-204ENST00000589466 DOT1LQ8TEK3 1739 aa8.3□□□□□ -1.08
LINC00906-204ENST00000589466 TOGARAM1Q9Y4F4 1720 aa8.3□□□□□ -1.08
LINC00906-204ENST00000589466 ALDH1A1P00352 501 aa8.3□□□□□ -1.08
LINC00906-204ENST00000589466 PHKG2P15735 406 aa8.3□□□□□ -1.08
LINC00906-204ENST00000589466 KCNQ4P56696 695 aa8.3□□□□□ -1.08
LINC00906-204ENST00000589466 WNT7BP56706 349 aa8.3□□□□□ -1.08
LINC00906-204ENST00000589466 INSM1Q01101 510 aaPredicted RBP8.3□□□□□ -1.08
LINC00906-204ENST00000589466 ZNF530Q6P9A1 599 aaPredicted RBP8.3□□□□□ -1.08
LINC00906-204ENST00000589466 KDM6AO15550 1401 aaPredicted RBP8.29□□□□□ -1.08
LINC00906-204ENST00000589466 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
LINC00906-204ENST00000589466 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
LINC00906-204ENST00000589466 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
LINC00906-204ENST00000589466 LORP23490 312 aaPredicted RBP8.28□□□□□ -1.08
LINC00906-204ENST00000589466 USP46P62068 366 aa8.28□□□□□ -1.08
LINC00906-204ENST00000589466 R3HDM1Q15032 1099 aaKnown RBP8.28□□□□□ -1.08
LINC00906-204ENST00000589466 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
LINC00906-204ENST00000589466 MPRIPQ6WCQ1 1025 aa8.28□□□□□ -1.08
LINC00906-204ENST00000589466 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
LINC00906-204ENST00000589466 CLUAP1Q96AJ1 413 aa8.28□□□□□ -1.08
LINC00906-204ENST00000589466 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
LINC00906-204ENST00000589466 BTAF1O14981 1849 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 NUP188Q5SRE5 1749 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 U2AF1L5P0DN76 240 aaPredicted RBP8.27□□□□□ -1.09
LINC00906-204ENST00000589466 BMP1P13497 986 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 JUNDP17535 347 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 PRKAR2BP31323 418 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 U2AF1Q01081 240 aaKnown RBP eCLIP8.27□□□□□ -1.09
LINC00906-204ENST00000589466 TXNRD1Q16881 649 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 PLEKHO1Q53GL0 409 aaPredicted RBP8.27□□□□□ -1.09
LINC00906-204ENST00000589466 IFNL2Q8IZJ0 200 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 PIGBQ92521 554 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 KIFC2Q96AC6 838 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 PHACTR3Q96KR7 559 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 RREB1Q92766 1687 aa8.27□□□□□ -1.09
LINC00906-204ENST00000589466 PLSCR1O15162 318 aa8.26□□□□□ -1.09
LINC00906-204ENST00000589466 RALBP1Q15311 655 aa8.26□□□□□ -1.09
LINC00906-204ENST00000589466 MTHFSDQ2M296 383 aaKnown RBP8.26□□□□□ -1.09
LINC00906-204ENST00000589466 CCDC82Q8N4S0 544 aa8.26□□□□□ -1.09
LINC00906-204ENST00000589466 PRKRIP1Q9H875 184 aaPredicted RBP8.26□□□□□ -1.09
LINC00906-204ENST00000589466 PCDHGC3Q9UN70 934 aa8.26□□□□□ -1.09
LINC00906-204ENST00000589466 MYBBP1AQ9BQG0 1328 aaKnown RBP8.26□□□□□ -1.09
LINC00906-204ENST00000589466 PALLDQ8WX93 1383 aa8.25□□□□□ -1.09
LINC00906-204ENST00000589466 PDIA4P13667 645 aaKnown RBP8.25□□□□□ -1.09
LINC00906-204ENST00000589466 ZNF827Q17R98 1081 aa8.25□□□□□ -1.09
LINC00906-204ENST00000589466 AMOTQ4VCS5 1084 aa8.25□□□□□ -1.09
LINC00906-204ENST00000589466 C1orf141Q5JVX7 400 aa8.25□□□□□ -1.09
LINC00906-204ENST00000589466 PDGFDQ9GZP0 370 aaPredicted RBP8.25□□□□□ -1.09
LINC00906-204ENST00000589466 ASAP1Q9ULH1 1129 aa8.25□□□□□ -1.09
LINC00906-204ENST00000589466 PLEKHG2Q9H7P9 1386 aa8.24□□□□□ -1.09
LINC00906-204ENST00000589466 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
LINC00906-204ENST00000589466 VEGFBP49765 207 aa8.24□□□□□ -1.09
LINC00906-204ENST00000589466 SH3BP2P78314 561 aa8.24□□□□□ -1.09
LINC00906-204ENST00000589466 CCDC184Q52MB2 194 aa8.24□□□□□ -1.09
LINC00906-204ENST00000589466 DCAF5Q96JK2 942 aa8.24□□□□□ -1.09
LINC00906-204ENST00000589466 NUDT12Q9BQG2 462 aa8.24□□□□□ -1.09
LINC00906-204ENST00000589466 LGR6Q9HBX8 967 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms