RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 MASTLQ96GX5 879 aa28.26■■■□□ 2.11
R3HDM4-205ENST00000589445 CCDC85AQ96PX6 553 aaPredicted RBP28.26■■■□□ 2.11
R3HDM4-205ENST00000589445 STYK1Q6J9G0 422 aa28.25■■■□□ 2.11
R3HDM4-205ENST00000589445 PIM2Q9P1W9 311 aa28.25■■■□□ 2.11
R3HDM4-205ENST00000589445 GOLGB1Q14789 3259 aaKnown RBP28.24■■■□□ 2.11
R3HDM4-205ENST00000589445 UBTFL1P0CB47 393 aaPredicted RBP28.24■■■□□ 2.11
R3HDM4-205ENST00000589445 KCNA3P22001 575 aa28.24■■■□□ 2.11
R3HDM4-205ENST00000589445 MEIS3Q99687 375 aa28.24■■■□□ 2.11
R3HDM4-205ENST00000589445 BCS1LQ9Y276 419 aa28.24■■■□□ 2.11
R3HDM4-205ENST00000589445 CEP350Q5VT06 3117 aa28.24■■■□□ 2.11
R3HDM4-205ENST00000589445 COL4A1P02462 1669 aa28.23■■■□□ 2.11
R3HDM4-205ENST00000589445 KLRG2A4D1S0 409 aaPredicted RBP28.23■■■□□ 2.11
R3HDM4-205ENST00000589445 RBM17Q96I25 401 aaKnown RBP28.23■■■□□ 2.11
R3HDM4-205ENST00000589445 SUCLG2Q96I99 432 aa28.23■■■□□ 2.11
R3HDM4-205ENST00000589445 USP44Q9H0E7 712 aa28.23■■■□□ 2.11
R3HDM4-205ENST00000589445 CHMP3Q9Y3E7 222 aa28.23■■■□□ 2.11
R3HDM4-205ENST00000589445 UTYO14607 1347 aa28.22■■■□□ 2.11
R3HDM4-205ENST00000589445 CCDC152Q4G0S7 254 aa28.22■■■□□ 2.11
R3HDM4-205ENST00000589445 DALRD3Q5D0E6 543 aaKnown RBP28.22■■■□□ 2.11
R3HDM4-205ENST00000589445 PRPF40BQ6NWY9 871 aaKnown RBP28.21■■■□□ 2.11
R3HDM4-205ENST00000589445 DDX46Q7L014 1031 aaKnown RBP28.21■■■□□ 2.11
R3HDM4-205ENST00000589445 TTLL6Q8N841 843 aa28.21■■■□□ 2.11
R3HDM4-205ENST00000589445 CNKSR1Q969H4 720 aa28.21■■■□□ 2.11
R3HDM4-205ENST00000589445 SF3B3Q15393 1217 aaKnown RBP28.2■■■□□ 2.1
R3HDM4-205ENST00000589445 C20orf194Q5TEA3 1177 aa28.2■■■□□ 2.1
R3HDM4-205ENST00000589445 PLA2G12BQ9BX93 195 aa28.2■■■□□ 2.1
R3HDM4-205ENST00000589445 ZNF219Q9P2Y4 722 aaPredicted RBP28.2■■■□□ 2.1
R3HDM4-205ENST00000589445 COG6Q9Y2V7 657 aa28.2■■■□□ 2.1
R3HDM4-205ENST00000589445 LRRC37AA6NMS7 1700 aa28.19■■■□□ 2.1
R3HDM4-205ENST00000589445 FAM161AQ3B820 660 aa28.19■■■□□ 2.1
R3HDM4-205ENST00000589445 EPHA10Q5JZY3 1008 aa28.18■■■□□ 2.1
R3HDM4-205ENST00000589445 BICC1Q9H694 974 aaKnown RBP28.18■■■□□ 2.1
R3HDM4-205ENST00000589445 GNAI3P08754 354 aa28.17■■■□□ 2.1
R3HDM4-205ENST00000589445 HOXA10P31260 410 aaPredicted RBP28.17■■■□□ 2.1
R3HDM4-205ENST00000589445 MVPQ14764 893 aaKnown RBP28.17■■■□□ 2.1
R3HDM4-205ENST00000589445 TTLL11Q8NHH1 800 aa28.17■■■□□ 2.1
R3HDM4-205ENST00000589445 GREM2Q9H772 168 aa28.17■■■□□ 2.1
R3HDM4-205ENST00000589445 PPEF1O14829 653 aaPredicted RBP28.16■■■□□ 2.1
R3HDM4-205ENST00000589445 YBX3P16989 372 aaKnown RBP eCLIP28.16■■■□□ 2.12e-6■□□□□ 8.5
R3HDM4-205ENST00000589445 ALDH1B1P30837 517 aa28.16■■■□□ 2.1
R3HDM4-205ENST00000589445 FOXO4P98177 505 aa28.16■■■□□ 2.1
R3HDM4-205ENST00000589445 PDE3AQ14432 1141 aa28.16■■■□□ 2.1
R3HDM4-205ENST00000589445 LMBR1LQ6UX01 489 aa28.16■■■□□ 2.1
R3HDM4-205ENST00000589445 CRAMP1Q96RY5 1269 aa28.16■■■□□ 2.1
R3HDM4-205ENST00000589445 LRRFIP2Q9Y608 721 aaKnown RBP28.16■■■□□ 2.1
R3HDM4-205ENST00000589445 GRAPQ13588 217 aa28.15■■■□□ 2.1
R3HDM4-205ENST00000589445 GRAPLQ8TC17 118 aaPredicted RBP28.15■■■□□ 2.1
R3HDM4-205ENST00000589445 SEC31BQ9NQW1 1179 aa28.15■■■□□ 2.1
R3HDM4-205ENST00000589445 RTL9Q8NET4 1388 aa28.14■■■□□ 2.1
R3HDM4-205ENST00000589445 KAZALD1Q96I82 304 aa28.14■■■□□ 2.1
R3HDM4-205ENST00000589445 SUPT16HQ9Y5B9 1047 aaKnown RBP28.14■■■□□ 2.1
R3HDM4-205ENST00000589445 A0A1B0GUL6 1792 aa28.14■■■□□ 2.09
R3HDM4-205ENST00000589445 DDX19BQ9UMR2 479 aa28.13■■■□□ 2.09
R3HDM4-205ENST00000589445 HDAC5Q9UQL6 1122 aa28.13■■■□□ 2.09
R3HDM4-205ENST00000589445 C21orf2O43822 256 aa28.12■■■□□ 2.09
R3HDM4-205ENST00000589445 ITGA6P23229 1130 aa28.12■■■□□ 2.09
R3HDM4-205ENST00000589445 ANKRD44Q8N8A2 993 aa28.12■■■□□ 2.09
R3HDM4-205ENST00000589445 CELF1Q92879 486 aaKnown RBP28.12■■■□□ 2.09
R3HDM4-205ENST00000589445 CDC5LQ99459 802 aaKnown RBP28.12■■■□□ 2.09
R3HDM4-205ENST00000589445 C1orf115Q9H7X2 142 aa28.12■■■□□ 2.09
R3HDM4-205ENST00000589445 FER1L6Q2WGJ9 1857 aa28.12■■■□□ 2.09
R3HDM4-205ENST00000589445 GNAI2P04899 355 aa28.11■■■□□ 2.09
R3HDM4-205ENST00000589445 CSF1RP07333 972 aa28.1■■■□□ 2.09
R3HDM4-205ENST00000589445 IFIT5Q13325 482 aaKnown RBP28.1■■■□□ 2.09
R3HDM4-205ENST00000589445 TAF7LQ5H9L4 462 aa28.1■■■□□ 2.09
R3HDM4-205ENST00000589445 SLC51AQ86UW1 340 aa28.1■■■□□ 2.09
R3HDM4-205ENST00000589445 ANKRD18BA2A2Z9 1011 aa28.09■■■□□ 2.09
R3HDM4-205ENST00000589445 CCDC57Q2TAC2 916 aa28.09■■■□□ 2.09
R3HDM4-205ENST00000589445 ANKRD18AQ8IVF6 992 aa28.09■■■□□ 2.09
R3HDM4-205ENST00000589445 CENPBP07199 599 aaPredicted RBP28.08■■■□□ 2.09
R3HDM4-205ENST00000589445 RABL6Q3YEC7 729 aaPredicted RBP28.08■■■□□ 2.09
R3HDM4-205ENST00000589445 OLFM4Q6UX06 510 aa28.08■■■□□ 2.09
R3HDM4-205ENST00000589445 TMX4Q9H1E5 349 aaPredicted RBP28.08■■■□□ 2.09
R3HDM4-205ENST00000589445 ZBTB7BO15156 539 aaPredicted RBP28.07■■■□□ 2.08
R3HDM4-205ENST00000589445 GRIN3BO60391 1043 aa28.07■■■□□ 2.08
R3HDM4-205ENST00000589445 IGHMBP2P38935 993 aaKnown RBP28.06■■■□□ 2.08
R3HDM4-205ENST00000589445 RPS8P62241 208 aaKnown RBP28.06■■■□□ 2.08
R3HDM4-205ENST00000589445 CCDC93Q567U6 631 aa28.06■■■□□ 2.08
R3HDM4-205ENST00000589445 CCDC88AQ3V6T2 1871 aa28.06■■■□□ 2.08
R3HDM4-205ENST00000589445 BBOX1O75936 387 aa28.05■■■□□ 2.08
R3HDM4-205ENST00000589445 LTBP1Q14766 1721 aa28.05■■■□□ 2.08
R3HDM4-205ENST00000589445 SOGA3Q5TF21 947 aa28.05■■■□□ 2.08
R3HDM4-205ENST00000589445 ARHGAP27Q6ZUM4 889 aa28.04■■■□□ 2.08
R3HDM4-205ENST00000589445 TMC4Q7Z404 712 aa28.04■■■□□ 2.08
R3HDM4-205ENST00000589445 CRBNQ96SW2 442 aa28.04■■■□□ 2.08
R3HDM4-205ENST00000589445 CHMP4BQ9H444 224 aaKnown RBP28.04■■■□□ 2.08
R3HDM4-205ENST00000589445 ATP6V0A2Q9Y487 856 aa28.04■■■□□ 2.08
R3HDM4-205ENST00000589445 TIAM2Q8IVF5 1701 aa28.04■■■□□ 2.08
R3HDM4-205ENST00000589445 ZNF594Q96JF6 807 aaPredicted RBP28.03■■■□□ 2.08
R3HDM4-205ENST00000589445 MPHOSPH8Q99549 860 aa28.03■■■□□ 2.08
R3HDM4-205ENST00000589445 RASSF7Q02833 373 aa28.02■■■□□ 2.08
R3HDM4-205ENST00000589445 DUOX1Q9NRD9 1551 aa28.02■■■□□ 2.08
R3HDM4-205ENST00000589445 SRGAP3O43295 1099 aa28.01■■■□□ 2.07
R3HDM4-205ENST00000589445 HSPA6P17066 643 aa28.01■■■□□ 2.07
R3HDM4-205ENST00000589445 C7orf43Q8WVR3 580 aa28.01■■■□□ 2.07
R3HDM4-205ENST00000589445 SBF1O95248 1867 aa28.01■■■□□ 2.07
R3HDM4-205ENST00000589445 IRX6P78412 446 aaPredicted RBP28■■■□□ 2.07
R3HDM4-205ENST00000589445 KLHDC4Q8TBB5 520 aa28■■■□□ 2.07
R3HDM4-205ENST00000589445 SP8Q8IXZ3 490 aa27.99■■■□□ 2.07
R3HDM4-205ENST00000589445 GPBP1L1Q9HC44 474 aaPredicted RBP27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms