RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 NLRP8Q86W28 1048 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 STAG2Q8N3U4 1231 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 LATS2Q9NRM7 1088 aa5.26□□□□□ -1.57
ZNF540-207ENST00000589285 ZBTB42B2RXF5 422 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 FKBP4Q02790 459 aaKnown RBP eCLIP5.25□□□□□ -1.57
ZNF540-207ENST00000589285 C1orf53Q5VUE5 145 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 CNTN3Q9P232 1028 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 IFT140Q96RY7 1462 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 ICMTO60725 284 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 FAM157BP0CG42 384 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 PI16Q6UXB8 463 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 C1orf216Q8TAB5 229 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 OXCT2Q9BYC2 517 aaPredicted RBP5.25□□□□□ -1.57
ZNF540-207ENST00000589285 GSX2Q9BZM3 304 aa5.25□□□□□ -1.57
ZNF540-207ENST00000589285 ZNF385CQ66K41 422 aaPredicted RBP5.24□□□□□ -1.57
ZNF540-207ENST00000589285 DNMBPQ6XZF7 1577 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 CEP164Q9UPV0 1460 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 UBAP1LF5GYI3 381 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 GPR182O15218 404 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 BRD1O95696 1058 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 CPB1P15086 417 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 ARID4AP29374 1257 aaPredicted RBP5.24□□□□□ -1.57
ZNF540-207ENST00000589285 TRIM52Q96A61 297 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 MBIPQ9NS73 344 aa5.24□□□□□ -1.57
ZNF540-207ENST00000589285 TARBP1Q13395 1621 aaKnown RBP5.24□□□□□ -1.57
ZNF540-207ENST00000589285 PTCD1O75127 700 aaKnown RBP5.23□□□□□ -1.57
ZNF540-207ENST00000589285 RARAP10276 462 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 TMC1Q8TDI8 760 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 KCNH4Q9UQ05 1017 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 FAM229AH3BQW9 127 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 WIPF1O43516 503 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 CELA2BP08218 269 aaPredicted RBP5.23□□□□□ -1.57
ZNF540-207ENST00000589285 IRS1P35568 1242 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 ARSDP51689 593 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 TXNDC11Q6PKC3 985 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 C1orf127Q8N9H9 656 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 SOWAHDA6NJG2 315 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 METTL12A8MUP2 240 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 PDGFAP04085 211 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 AMPD1P23109 780 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 FOXR1Q6PIV2 292 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 FIGNL1Q6PIW4 674 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 CLASP1Q7Z460 1538 aa5.23□□□□□ -1.57
ZNF540-207ENST00000589285 ALBP02768 609 aa5.22□□□□□ -1.57
ZNF540-207ENST00000589285 PNMA5Q96PV4 448 aa5.22□□□□□ -1.57
ZNF540-207ENST00000589285 WWC3Q9ULE0 1092 aa5.22□□□□□ -1.57
ZNF540-207ENST00000589285 ATP11AP98196 1134 aa5.22□□□□□ -1.57
ZNF540-207ENST00000589285 TRAIPQ9BWF2 469 aa5.22□□□□□ -1.57
ZNF540-207ENST00000589285 RRAGCQ9HB90 399 aa5.22□□□□□ -1.57
ZNF540-207ENST00000589285 SRSF11Q05519 484 aaKnown RBP5.21□□□□□ -1.57
ZNF540-207ENST00000589285 NPAS3Q8IXF0 933 aa5.21□□□□□ -1.57
ZNF540-207ENST00000589285 UBE2OQ9C0C9 1292 aaKnown RBP5.21□□□□□ -1.57
ZNF540-207ENST00000589285 EREGO14944 169 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 SAMD5Q5TGI4 173 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 ZNF468Q5VIY5 522 aaPredicted RBP5.21□□□□□ -1.58
ZNF540-207ENST00000589285 HOMEZQ8IX15 550 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 NIF3L1Q9GZT8 377 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 SUV39H2Q9H5I1 410 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 DNAJB12Q9NXW2 375 aaKnown RBP5.21□□□□□ -1.58
ZNF540-207ENST00000589285 FANCD2Q9BXW9 1451 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 ZSCAN1Q8NBB4 408 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 FAM161BQ96MY7 647 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 ELP3Q9H9T3 547 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 CNTNAP5Q8WYK1 1306 aa5.21□□□□□ -1.58
ZNF540-207ENST00000589285 FAM35AQ86V20 835 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 EDARADDQ8WWZ3 215 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 IGHA2P01877 340 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 HOXB4P17483 251 aaPredicted RBP5.2□□□□□ -1.58
ZNF540-207ENST00000589285 ADH7P40394 386 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 CCINQ13939 588 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 DHX32Q7L7V1 743 aaKnown RBP5.2□□□□□ -1.58
ZNF540-207ENST00000589285 ZNF438Q7Z4V0 828 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 KCTD17Q8N5Z5 321 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 LACRTQ9GZZ8 138 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 ANKIB1Q9P2G1 1089 aa5.2□□□□□ -1.58
ZNF540-207ENST00000589285 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.2□□□□□ -1.58
ZNF540-207ENST00000589285 MAPK1P28482 360 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 INSM1Q01101 510 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-207ENST00000589285 GDF6Q6KF10 455 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-207ENST00000589285 PSAPL1Q6NUJ1 521 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 TMC7Q7Z402 723 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 NEDD1Q8NHV4 660 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 CCER1Q8TC90 406 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-207ENST00000589285 CFHR5Q9BXR6 569 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 STARD13Q9Y3M8 1113 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 SHROOM2Q13796 1616 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 M0R082 166 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 SLURP2P0DP57 97 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 IER5Q5VY09 327 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 ZNF417Q8TAU3 575 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 ZNF587Q96SQ5 575 aaPredicted RBP5.19□□□□□ -1.58
ZNF540-207ENST00000589285 PHF24Q9UPV7 400 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 TNFRSF21O75509 655 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 EPXP11678 715 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 EIF2AK2P19525 551 aaKnown RBP5.19□□□□□ -1.58
ZNF540-207ENST00000589285 PERM1Q5SV97 790 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 ZNF428Q96B54 188 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 CHRDQ9H2X0 955 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 TRIM33Q9UPN9 1127 aa5.19□□□□□ -1.58
ZNF540-207ENST00000589285 RIMBP3CA6NJZ7 1639 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms