RNA–Protein interactions for RNA: ENST00000589161.1

CIRBP-221, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-221ENST00000589161 FKBP5Q13451 457 aaPredicted RBP24.58■■□□□ 1.53
CIRBP-221ENST00000589161 SUPT20HQ8NEM7 779 aa24.58■■□□□ 1.53
CIRBP-221ENST00000589161 VPS33BQ9H267 617 aa24.58■■□□□ 1.53
CIRBP-221ENST00000589161 POTECB2RU33 542 aa24.56■■□□□ 1.52
CIRBP-221ENST00000589161 FZD9O00144 591 aa24.56■■□□□ 1.52
CIRBP-221ENST00000589161 PDE8AO60658 829 aa24.56■■□□□ 1.52
CIRBP-221ENST00000589161 FSTL1Q12841 308 aa24.56■■□□□ 1.52
CIRBP-221ENST00000589161 DPP8Q6V1X1 898 aaPredicted RBP24.56■■□□□ 1.52
CIRBP-221ENST00000589161 LARGE2Q8N3Y3 721 aa24.56■■□□□ 1.52
CIRBP-221ENST00000589161 MPNDQ8N594 471 aa24.56■■□□□ 1.52
CIRBP-221ENST00000589161 RTFDC1Q9BY42 306 aaPredicted RBP24.56■■□□□ 1.52
CIRBP-221ENST00000589161 E9PSI1 815 aa24.55■■□□□ 1.52
CIRBP-221ENST00000589161 SLC51AQ86UW1 340 aa24.55■■□□□ 1.52
CIRBP-221ENST00000589161 CDHR2Q9BYE9 1310 aa24.55■■□□□ 1.52
CIRBP-221ENST00000589161 LAMB2P55268 1798 aa24.54■■□□□ 1.52
CIRBP-221ENST00000589161 NEURL1BA8MQ27 555 aa24.54■■□□□ 1.52
CIRBP-221ENST00000589161 CWF19L2Q2TBE0 894 aaKnown RBP24.54■■□□□ 1.52
CIRBP-221ENST00000589161 CCDC152Q4G0S7 254 aa24.54■■□□□ 1.52
CIRBP-221ENST00000589161 DNAAF4Q8WXU2 420 aa24.54■■□□□ 1.52
CIRBP-221ENST00000589161 JARID2Q92833 1246 aaPredicted RBP24.54■■□□□ 1.52
CIRBP-221ENST00000589161 CELF1Q92879 486 aaKnown RBP24.54■■□□□ 1.52
CIRBP-221ENST00000589161 DDX60Q8IY21 1712 aaKnown RBP24.54■■□□□ 1.52
CIRBP-221ENST00000589161 WDR90Q96KV7 1748 aa24.53■■□□□ 1.52
CIRBP-221ENST00000589161 EIF6P56537 245 aaKnown RBP24.53■■□□□ 1.52
CIRBP-221ENST00000589161 RPS8P62241 208 aaKnown RBP24.53■■□□□ 1.52
CIRBP-221ENST00000589161 SMC1BQ8NDV3 1235 aa24.53■■□□□ 1.52
CIRBP-221ENST00000589161 L3MBTL3Q96JM7 780 aaPredicted RBP24.53■■□□□ 1.52
CIRBP-221ENST00000589161 ZNF541Q9H0D2 1346 aa24.53■■□□□ 1.52
CIRBP-221ENST00000589161 IQCA1LA6NCM1 817 aa24.52■■□□□ 1.52
CIRBP-221ENST00000589161 PPIP5K2O43314 1243 aa24.52■■□□□ 1.52
CIRBP-221ENST00000589161 NIM1KQ8IY84 436 aa24.52■■□□□ 1.52
CIRBP-221ENST00000589161 LINS1Q8NG48 757 aa24.51■■□□□ 1.51
CIRBP-221ENST00000589161 H7C1W4 665 aa24.5■■□□□ 1.51
CIRBP-221ENST00000589161 GCKRQ14397 625 aa24.5■■□□□ 1.51
CIRBP-221ENST00000589161 AOC3Q16853 763 aa24.5■■□□□ 1.51
CIRBP-221ENST00000589161 GPC2Q8N158 579 aa24.5■■□□□ 1.51
CIRBP-221ENST00000589161 APLP1P51693 650 aa24.49■■□□□ 1.51
CIRBP-221ENST00000589161 SLFN5Q08AF3 891 aa24.49■■□□□ 1.51
CIRBP-221ENST00000589161 SEC31BQ9NQW1 1179 aa24.49■■□□□ 1.51
CIRBP-221ENST00000589161 CACNA1FO60840 1977 aa24.49■■□□□ 1.51
CIRBP-221ENST00000589161 CTSWP56202 376 aa24.48■■□□□ 1.51
CIRBP-221ENST00000589161 DIEXFQ68CQ4 756 aaKnown RBP24.48■■□□□ 1.51
CIRBP-221ENST00000589161 UBE3BQ7Z3V4 1068 aa24.48■■□□□ 1.51
CIRBP-221ENST00000589161 NSFL1CQ9UNZ2 370 aaKnown RBP24.48■■□□□ 1.51
CIRBP-221ENST00000589161 KIAA2012Q0VF49 1180 aa24.47■■□□□ 1.51
CIRBP-221ENST00000589161 TTLL11Q8NHH1 800 aa24.46■■□□□ 1.51
CIRBP-221ENST00000589161 CCDC85AQ96PX6 553 aaPredicted RBP24.46■■□□□ 1.51
CIRBP-221ENST00000589161 HACL1Q9UJ83 578 aa24.46■■□□□ 1.51
CIRBP-221ENST00000589161 ZNRF3Q9ULT6 936 aa24.46■■□□□ 1.51
CIRBP-221ENST00000589161 F6X3S4 739 aa24.45■■□□□ 1.5
CIRBP-221ENST00000589161 GPSM2P81274 684 aa24.45■■□□□ 1.5
CIRBP-221ENST00000589161 ANKRD18AQ8IVF6 992 aa24.45■■□□□ 1.5
CIRBP-221ENST00000589161 CDC5LQ99459 802 aaKnown RBP24.45■■□□□ 1.5
CIRBP-221ENST00000589161 TAF1DQ9H5J8 278 aaPredicted RBP24.45■■□□□ 1.5
CIRBP-221ENST00000589161 GJA3Q9Y6H8 435 aa24.45■■□□□ 1.5
CIRBP-221ENST00000589161 COL4A5P29400 1685 aa24.44■■□□□ 1.5
CIRBP-221ENST00000589161 BEND3Q5T5X7 828 aa24.44■■□□□ 1.5
CIRBP-221ENST00000589161 PLA2G12BQ9BX93 195 aa24.44■■□□□ 1.5
CIRBP-221ENST00000589161 TAF1P21675 1872 aa24.44■■□□□ 1.5
CIRBP-221ENST00000589161 C6orf229H3BNL8 230 aa24.43■■□□□ 1.5
CIRBP-221ENST00000589161 WASHC4Q2M389 1173 aa24.43■■□□□ 1.5
CIRBP-221ENST00000589161 CDCA7LQ96GN5 454 aa24.43■■□□□ 1.5
CIRBP-221ENST00000589161 EYA3Q99504 573 aa24.43■■□□□ 1.5
CIRBP-221ENST00000589161 CASP7P55210 303 aa24.42■■□□□ 1.5
CIRBP-221ENST00000589161 CHADLQ6NUI6 762 aa24.42■■□□□ 1.5
CIRBP-221ENST00000589161 PODXL2Q9NZ53 605 aa24.42■■□□□ 1.5
CIRBP-221ENST00000589161 POLLQ9UGP5 575 aa24.42■■□□□ 1.5
CIRBP-221ENST00000589161 RTL9Q8NET4 1388 aa24.42■■□□□ 1.5
CIRBP-221ENST00000589161 LMOD1P29536 600 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-221ENST00000589161 EPHX2P34913 555 aa24.41■■□□□ 1.5
CIRBP-221ENST00000589161 PNMA8AQ86V59 439 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-221ENST00000589161 TRMT2AQ8IZ69 625 aaKnown RBP24.41■■□□□ 1.5
CIRBP-221ENST00000589161 MRPL50Q8N5N7 158 aaKnown RBP24.41■■□□□ 1.5
CIRBP-221ENST00000589161 GREM2Q9H772 168 aa24.41■■□□□ 1.5
CIRBP-221ENST00000589161 ANKIB1Q9P2G1 1089 aa24.41■■□□□ 1.5
CIRBP-221ENST00000589161 LRRC37AA6NMS7 1700 aa24.41■■□□□ 1.5
CIRBP-221ENST00000589161 CXCL9Q07325 125 aa24.4■■□□□ 1.5
CIRBP-221ENST00000589161 LDHDQ86WU2 507 aa24.4■■□□□ 1.5
CIRBP-221ENST00000589161 MIER1Q8N108 512 aa24.4■■□□□ 1.5
CIRBP-221ENST00000589161 TBC1D16Q8TBP0 767 aa24.4■■□□□ 1.5
CIRBP-221ENST00000589161 SCN4AP35499 1836 aa24.4■■□□□ 1.5
CIRBP-221ENST00000589161 TNIP1Q15025 636 aa24.39■■□□□ 1.49
CIRBP-221ENST00000589161 SLC4A10Q6U841 1118 aa24.39■■□□□ 1.49
CIRBP-221ENST00000589161 BSDC1Q9NW68 430 aaPredicted RBP24.39■■□□□ 1.49
CIRBP-221ENST00000589161 GGA1Q9UJY5 639 aa24.39■■□□□ 1.49
CIRBP-221ENST00000589161 COL4A1P02462 1669 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 RIMBP2O15034 1052 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 ALDH1L1O75891 902 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 CSF1RP07333 972 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 POTEIP0CG38 1075 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 POTEJP0CG39 1038 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 EAPPQ56P03 285 aaPredicted RBP24.38■■□□□ 1.49
CIRBP-221ENST00000589161 CIAPIN1Q6FI81 312 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 ZC3H12CQ9C0D7 883 aaKnown RBP24.38■■□□□ 1.49
CIRBP-221ENST00000589161 SRCIN1Q9C0H9 1055 aa24.38■■□□□ 1.49
CIRBP-221ENST00000589161 CT47B1P0C2W7 299 aaPredicted RBP24.37■■□□□ 1.49
CIRBP-221ENST00000589161 ALDH1L2Q3SY69 923 aa24.37■■□□□ 1.49
CIRBP-221ENST00000589161 SSH1Q8WYL5 1049 aa24.37■■□□□ 1.49
CIRBP-221ENST00000589161 DUOX1Q9NRD9 1551 aa24.37■■□□□ 1.49
CIRBP-221ENST00000589161 PTPRCP08575 1304 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms