RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ANKRD36CQ5JPF3 1778 aa18.27■□□□□ 0.51
VMP1-209ENST00000588915 CST9Q5W186 159 aa18.26■□□□□ 0.51
VMP1-209ENST00000588915 SLC51AQ86UW1 340 aa18.26■□□□□ 0.51
VMP1-209ENST00000588915 PLBD2Q8NHP8 589 aa18.26■□□□□ 0.51
VMP1-209ENST00000588915 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
VMP1-209ENST00000588915 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
VMP1-209ENST00000588915 TLL2Q9Y6L7 1015 aa18.26■□□□□ 0.51
VMP1-209ENST00000588915 MYBBP1AQ9BQG0 1328 aaKnown RBP18.25■□□□□ 0.51
VMP1-209ENST00000588915 HSPA8P11142 646 aaKnown RBP18.25■□□□□ 0.51
VMP1-209ENST00000588915 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
VMP1-209ENST00000588915 CAPNS2Q96L46 248 aa18.25■□□□□ 0.51
VMP1-209ENST00000588915 DBF4Q9UBU7 674 aaPredicted RBP18.25■□□□□ 0.51
VMP1-209ENST00000588915 MAP2K2P36507 400 aa18.24■□□□□ 0.51
VMP1-209ENST00000588915 GMPSP49915 693 aaPredicted RBP18.24■□□□□ 0.51
VMP1-209ENST00000588915 SF3B3Q15393 1217 aaKnown RBP18.24■□□□□ 0.51
VMP1-209ENST00000588915 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
VMP1-209ENST00000588915 HHIPL1Q96JK4 782 aa18.24■□□□□ 0.51
VMP1-209ENST00000588915 GPR101Q96P66 508 aaPredicted RBP18.24■□□□□ 0.51
VMP1-209ENST00000588915 ISCA1Q9BUE6 129 aa18.24■□□□□ 0.51
VMP1-209ENST00000588915 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
VMP1-209ENST00000588915 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
VMP1-209ENST00000588915 TRPM7Q96QT4 1865 aa18.23■□□□□ 0.51
VMP1-209ENST00000588915 FMR1Q06787 632 aaKnown RBP eCLIP18.23■□□□□ 0.51
VMP1-209ENST00000588915 TRIM28Q13263 835 aaKnown RBP18.23■□□□□ 0.51
VMP1-209ENST00000588915 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
VMP1-209ENST00000588915 BCL2L13Q9BXK5 485 aa18.23■□□□□ 0.51
VMP1-209ENST00000588915 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
VMP1-209ENST00000588915 TRAF5O00463 557 aa18.22■□□□□ 0.51
VMP1-209ENST00000588915 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
VMP1-209ENST00000588915 DPF2Q92785 391 aa18.22■□□□□ 0.51
VMP1-209ENST00000588915 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
VMP1-209ENST00000588915 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
VMP1-209ENST00000588915 LAMB2P55268 1798 aa18.22■□□□□ 0.51
VMP1-209ENST00000588915 RAD17O75943 681 aa18.21■□□□□ 0.51
VMP1-209ENST00000588915 KRT24Q2M2I5 525 aa18.21■□□□□ 0.51
VMP1-209ENST00000588915 CYP4F22Q6NT55 531 aa18.21■□□□□ 0.51
VMP1-209ENST00000588915 PAXIP1Q6ZW49 1069 aaPredicted RBP18.21■□□□□ 0.51
VMP1-209ENST00000588915 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
VMP1-209ENST00000588915 SAPCD2Q86UD0 394 aa18.21■□□□□ 0.51
VMP1-209ENST00000588915 CCDC146Q8IYE0 955 aa18.21■□□□□ 0.51
VMP1-209ENST00000588915 CNOT7Q9UIV1 285 aaKnown RBP18.21■□□□□ 0.51
VMP1-209ENST00000588915 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.51
VMP1-209ENST00000588915 THSD7BQ9C0I4 1608 aa18.2■□□□□ 0.5
VMP1-209ENST00000588915 H7C1D1 291 aa18.2■□□□□ 0.5
VMP1-209ENST00000588915 CELF2O95319 508 aaKnown RBP18.2■□□□□ 0.5
VMP1-209ENST00000588915 WASHC4Q2M389 1173 aa18.2■□□□□ 0.5
VMP1-209ENST00000588915 YDJCA8MPS7 323 aa18.19■□□□□ 0.5
VMP1-209ENST00000588915 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
VMP1-209ENST00000588915 HIRAP54198 1017 aaPredicted RBP18.19■□□□□ 0.5
VMP1-209ENST00000588915 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
VMP1-209ENST00000588915 ADAMTS8Q9UP79 889 aa18.19■□□□□ 0.5
VMP1-209ENST00000588915 CA12O43570 354 aa18.18■□□□□ 0.5
VMP1-209ENST00000588915 DDX10Q13206 875 aaKnown RBP18.18■□□□□ 0.5
VMP1-209ENST00000588915 DUSP27Q5VZP5 1158 aa18.18■□□□□ 0.5
VMP1-209ENST00000588915 GLIS2Q9BZE0 524 aaPredicted RBP18.18■□□□□ 0.5
VMP1-209ENST00000588915 NSFL1CQ9UNZ2 370 aaKnown RBP18.18■□□□□ 0.5
VMP1-209ENST00000588915 RPS12P25398 132 aaKnown RBP18.17■□□□□ 0.5
VMP1-209ENST00000588915 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
VMP1-209ENST00000588915 EYA3Q99504 573 aa18.17■□□□□ 0.5
VMP1-209ENST00000588915 LRRC37AA6NMS7 1700 aa18.17■□□□□ 0.5
VMP1-209ENST00000588915 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
VMP1-209ENST00000588915 RPS8P62241 208 aaKnown RBP18.16■□□□□ 0.5
VMP1-209ENST00000588915 TRPM4Q8TD43 1214 aa18.16■□□□□ 0.5
VMP1-209ENST00000588915 ABHD8Q96I13 439 aa18.16■□□□□ 0.5
VMP1-209ENST00000588915 CHMP4AQ9BY43 222 aa18.16■□□□□ 0.5
VMP1-209ENST00000588915 DUOX1Q9NRD9 1551 aa18.16■□□□□ 0.5
VMP1-209ENST00000588915 PSMD14O00487 310 aa18.15■□□□□ 0.5
VMP1-209ENST00000588915 IRS4O14654 1257 aaPredicted RBP18.15■□□□□ 0.5
VMP1-209ENST00000588915 ZNF853P0CG23 659 aa18.15■□□□□ 0.5
VMP1-209ENST00000588915 CALD1Q05682 793 aaKnown RBP18.15■□□□□ 0.5
VMP1-209ENST00000588915 GRM1Q13255 1194 aa18.15■□□□□ 0.5
VMP1-209ENST00000588915 MICALL2Q8IY33 904 aa18.15■□□□□ 0.5
VMP1-209ENST00000588915 POLLQ9UGP5 575 aa18.15■□□□□ 0.5
VMP1-209ENST00000588915 DDX60Q8IY21 1712 aaKnown RBP18.15■□□□□ 0.5
VMP1-209ENST00000588915 C6orf229H3BNL8 230 aa18.14■□□□□ 0.49
VMP1-209ENST00000588915 AOC2O75106 756 aa18.14■□□□□ 0.49
VMP1-209ENST00000588915 BRPF1P55201 1214 aaPredicted RBP18.14■□□□□ 0.49
VMP1-209ENST00000588915 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
VMP1-209ENST00000588915 ZBTB38Q8NAP3 1195 aaPredicted RBP18.14■□□□□ 0.49
VMP1-209ENST00000588915 MBIPQ9NS73 344 aa18.14■□□□□ 0.49
VMP1-209ENST00000588915 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
VMP1-209ENST00000588915 PODXL2Q9NZ53 605 aa18.14■□□□□ 0.49
VMP1-209ENST00000588915 TAF1P21675 1872 aa18.14■□□□□ 0.49
VMP1-209ENST00000588915 GNAI1P63096 354 aa18.13■□□□□ 0.49
VMP1-209ENST00000588915 GPSM2P81274 684 aa18.13■□□□□ 0.49
VMP1-209ENST00000588915 GOLGA2Q08379 1002 aa18.13■□□□□ 0.49
VMP1-209ENST00000588915 TBC1D16Q8TBP0 767 aa18.13■□□□□ 0.49
VMP1-209ENST00000588915 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
VMP1-209ENST00000588915 RIMBP2O15034 1052 aa18.12■□□□□ 0.49
VMP1-209ENST00000588915 NOGQ13253 232 aa18.12■□□□□ 0.49
VMP1-209ENST00000588915 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
VMP1-209ENST00000588915 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
VMP1-209ENST00000588915 DBNDD1Q9H9R9 158 aa18.12■□□□□ 0.49
VMP1-209ENST00000588915 ECE2O60344 883 aa18.11■□□□□ 0.49
VMP1-209ENST00000588915 SAMD7Q7Z3H4 446 aa18.11■□□□□ 0.49
VMP1-209ENST00000588915 USP48Q86UV5 1035 aa18.11■□□□□ 0.49
VMP1-209ENST00000588915 ZNF408Q9H9D4 720 aa18.11■□□□□ 0.49
VMP1-209ENST00000588915 SHTN1A0MZ66 631 aa18.1■□□□□ 0.49
VMP1-209ENST00000588915 PCCAP05165 728 aaPredicted RBP18.1■□□□□ 0.49
VMP1-209ENST00000588915 VIL1P09327 827 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms