RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
CDK3-204ENST00000588812 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
CDK3-204ENST00000588812 C20orf194Q5TEA3 1177 aa13.95□□□□□ -0.18
CDK3-204ENST00000588812 DDX46Q7L014 1031 aaKnown RBP13.95□□□□□ -0.18
CDK3-204ENST00000588812 TTLL11Q8NHH1 800 aa13.95□□□□□ -0.18
CDK3-204ENST00000588812 CNKSR1Q969H4 720 aa13.95□□□□□ -0.18
CDK3-204ENST00000588812 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
CDK3-204ENST00000588812 CRAMP1Q96RY5 1269 aa13.95□□□□□ -0.18
CDK3-204ENST00000588812 COG6Q9Y2V7 657 aa13.95□□□□□ -0.18
CDK3-204ENST00000588812 LAMB2P55268 1798 aa13.95□□□□□ -0.18
CDK3-204ENST00000588812 DDX60Q8IY21 1712 aaKnown RBP13.95□□□□□ -0.18
CDK3-204ENST00000588812 TNRC6CQ9HCJ0 1690 aaKnown RBP13.95□□□□□ -0.18
CDK3-204ENST00000588812 CSF1RP07333 972 aa13.94□□□□□ -0.18
CDK3-204ENST00000588812 FOXO4P98177 505 aa13.94□□□□□ -0.18
CDK3-204ENST00000588812 TTLL6Q8N841 843 aa13.94□□□□□ -0.18
CDK3-204ENST00000588812 SUCLG2Q96I99 432 aa13.94□□□□□ -0.18
CDK3-204ENST00000588812 GNAI2P04899 355 aa13.93□□□□□ -0.18
CDK3-204ENST00000588812 DALRD3Q5D0E6 543 aaKnown RBP13.93□□□□□ -0.18
CDK3-204ENST00000588812 EPHA10Q5JZY3 1008 aa13.93□□□□□ -0.18
CDK3-204ENST00000588812 LMBR1LQ6UX01 489 aa13.93□□□□□ -0.18
CDK3-204ENST00000588812 KAZALD1Q96I82 304 aa13.93□□□□□ -0.18
CDK3-204ENST00000588812 BICC1Q9H694 974 aaKnown RBP13.93□□□□□ -0.18
CDK3-204ENST00000588812 RTL9Q8NET4 1388 aa13.93□□□□□ -0.18
CDK3-204ENST00000588812 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
CDK3-204ENST00000588812 RABL6Q3YEC7 729 aaPredicted RBP13.92□□□□□ -0.18
CDK3-204ENST00000588812 LRRFIP2Q9Y608 721 aaKnown RBP13.92□□□□□ -0.18
CDK3-204ENST00000588812 COL11A2P13942 1736 aaPredicted RBP13.92□□□□□ -0.18
CDK3-204ENST00000588812 BBOX1O75936 387 aa13.91□□□□□ -0.18
CDK3-204ENST00000588812 IFIT5Q13325 482 aaKnown RBP13.91□□□□□ -0.18
CDK3-204ENST00000588812 GRAPQ13588 217 aa13.91□□□□□ -0.18
CDK3-204ENST00000588812 PRPF40BQ6NWY9 871 aaKnown RBP13.91□□□□□ -0.18
CDK3-204ENST00000588812 ANKRD44Q8N8A2 993 aa13.91□□□□□ -0.18
CDK3-204ENST00000588812 GRAPLQ8TC17 118 aaPredicted RBP13.91□□□□□ -0.18
CDK3-204ENST00000588812 CCDC85AQ96PX6 553 aaPredicted RBP13.91□□□□□ -0.18
CDK3-204ENST00000588812 CDC5LQ99459 802 aaKnown RBP13.91□□□□□ -0.18
CDK3-204ENST00000588812 GREM2Q9H772 168 aa13.91□□□□□ -0.18
CDK3-204ENST00000588812 CHMP3Q9Y3E7 222 aa13.91□□□□□ -0.18
CDK3-204ENST00000588812 MYH3P11055 1940 aa13.91□□□□□ -0.18
CDK3-204ENST00000588812 DLEC1Q9Y238 1755 aa13.91□□□□□ -0.18
CDK3-204ENST00000588812 ANKRD18BA2A2Z9 1011 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 ITGA6P23229 1130 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
CDK3-204ENST00000588812 CCDC57Q2TAC2 916 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 TMC4Q7Z404 712 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 SEC31BQ9NQW1 1179 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 ZBTB40Q9NUA8 1239 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 BCS1LQ9Y276 419 aa13.9□□□□□ -0.18
CDK3-204ENST00000588812 ANKRD18AQ8IVF6 992 aa13.89□□□□□ -0.19
CDK3-204ENST00000588812 TMX4Q9H1E5 349 aaPredicted RBP13.89□□□□□ -0.19
CDK3-204ENST00000588812 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
CDK3-204ENST00000588812 PPEF1O14829 653 aaPredicted RBP13.88□□□□□ -0.19
CDK3-204ENST00000588812 IGHMBP2P38935 993 aaKnown RBP13.88□□□□□ -0.19
CDK3-204ENST00000588812 MTX1Q13505 466 aa13.88□□□□□ -0.19
CDK3-204ENST00000588812 SOGA3Q5TF21 947 aa13.88□□□□□ -0.19
CDK3-204ENST00000588812 CC2D2BQ6DHV5 1058 aa13.88□□□□□ -0.19
CDK3-204ENST00000588812 CELF1Q92879 486 aaKnown RBP13.88□□□□□ -0.19
CDK3-204ENST00000588812 WWC3Q9ULE0 1092 aa13.88□□□□□ -0.19
CDK3-204ENST00000588812 BRCA1P38398 1863 aaKnown RBP13.88□□□□□ -0.19
CDK3-204ENST00000588812 AAMPQ13685 434 aa13.87□□□□□ -0.19
CDK3-204ENST00000588812 GPR162Q16538 588 aa13.87□□□□□ -0.19
CDK3-204ENST00000588812 GRIPAP1Q4V328 841 aa13.87□□□□□ -0.19
CDK3-204ENST00000588812 TAF7LQ5H9L4 462 aa13.87□□□□□ -0.19
CDK3-204ENST00000588812 PELP1Q8IZL8 1130 aaKnown RBP13.87□□□□□ -0.19
CDK3-204ENST00000588812 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
CDK3-204ENST00000588812 CRBNQ96SW2 442 aa13.87□□□□□ -0.19
CDK3-204ENST00000588812 BSDC1Q9NW68 430 aaPredicted RBP13.87□□□□□ -0.19
CDK3-204ENST00000588812 ATP6V0A2Q9Y487 856 aa13.87□□□□□ -0.19
CDK3-204ENST00000588812 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
CDK3-204ENST00000588812 C21orf2O43822 256 aa13.86□□□□□ -0.19
CDK3-204ENST00000588812 SP8Q8IXZ3 490 aa13.86□□□□□ -0.19
CDK3-204ENST00000588812 MPHOSPH8Q99549 860 aa13.86□□□□□ -0.19
CDK3-204ENST00000588812 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
CDK3-204ENST00000588812 SLX4Q8IY92 1834 aa13.85□□□□□ -0.19
CDK3-204ENST00000588812 GRIN3BO60391 1043 aa13.85□□□□□ -0.19
CDK3-204ENST00000588812 YBX3P16989 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
CDK3-204ENST00000588812 ATP8B2P98198 1209 aa13.85□□□□□ -0.19
CDK3-204ENST00000588812 CCDC93Q567U6 631 aa13.85□□□□□ -0.19
CDK3-204ENST00000588812 LDHAL6AQ6ZMR3 332 aa13.85□□□□□ -0.19
CDK3-204ENST00000588812 RPAP2Q8IXW5 612 aaPredicted RBP13.85□□□□□ -0.19
CDK3-204ENST00000588812 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
CDK3-204ENST00000588812 RFX5P48382 616 aaPredicted RBP13.84□□□□□ -0.19
CDK3-204ENST00000588812 CEP85Q6P2H3 762 aa13.84□□□□□ -0.19
CDK3-204ENST00000588812 RTKN2Q8IZC4 609 aa13.84□□□□□ -0.19
CDK3-204ENST00000588812 ZNF594Q96JF6 807 aaPredicted RBP13.84□□□□□ -0.19
CDK3-204ENST00000588812 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
CDK3-204ENST00000588812 TAF1P21675 1872 aa13.83□□□□□ -0.2
CDK3-204ENST00000588812 HMMRO75330 724 aa13.83□□□□□ -0.2
CDK3-204ENST00000588812 PTPN12Q05209 780 aaKnown RBP13.83□□□□□ -0.2
CDK3-204ENST00000588812 SSH3Q8TE77 659 aa13.83□□□□□ -0.2
CDK3-204ENST00000588812 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
CDK3-204ENST00000588812 CNNM1Q9NRU3 951 aa13.83□□□□□ -0.2
CDK3-204ENST00000588812 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
CDK3-204ENST00000588812 CACNA1SQ13698 1873 aa13.82□□□□□ -0.2
CDK3-204ENST00000588812 PNMA6EA0A0J9YXQ4 647 aa13.82□□□□□ -0.2
CDK3-204ENST00000588812 POLA2Q14181 598 aa13.82□□□□□ -0.2
CDK3-204ENST00000588812 ARHGAP27Q6ZUM4 889 aa13.82□□□□□ -0.2
CDK3-204ENST00000588812 MPNDQ8N594 471 aa13.82□□□□□ -0.2
CDK3-204ENST00000588812 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
CDK3-204ENST00000588812 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 213.9 ms