RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 ATP6V1DQ9Y5K8 247 aa8.96□□□□□ -0.98
ZNF554-202ENST00000588534 MEGF6O75095 1541 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 SMARCA5O60264 1052 aaPredicted RBP8.95□□□□□ -0.98
ZNF554-202ENST00000588534 IDH1O75874 414 aaKnown RBP8.95□□□□□ -0.98
ZNF554-202ENST00000588534 NBPF7P0C2Y1 421 aaPredicted RBP8.95□□□□□ -0.98
ZNF554-202ENST00000588534 AIDAQ96BJ3 306 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 ISY1Q9ULR0 285 aaKnown RBP8.95□□□□□ -0.98
ZNF554-202ENST00000588534 ATP10DQ9P241 1426 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 TOPAZ1Q8N9V7 1692 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 PUM3Q15397 648 aaKnown RBP8.95□□□□□ -0.98
ZNF554-202ENST00000588534 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 GOLGA6L4A6NEF3 574 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 CIAO1O76071 339 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 BAG3O95817 575 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 PROSER3Q2NL68 480 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 CERS3Q8IU89 383 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 GPR108Q9NPR9 543 aa8.95□□□□□ -0.98
ZNF554-202ENST00000588534 CNTNAP4Q9C0A0 1308 aa8.94□□□□□ -0.98
ZNF554-202ENST00000588534 USPL1Q5W0Q7 1092 aa8.94□□□□□ -0.98
ZNF554-202ENST00000588534 DZIP1Q86YF9 867 aaKnown RBP8.94□□□□□ -0.98
ZNF554-202ENST00000588534 ZC3H12CQ9C0D7 883 aaKnown RBP8.94□□□□□ -0.98
ZNF554-202ENST00000588534 U3KPZ7 1027 aaPredicted RBP8.94□□□□□ -0.98
ZNF554-202ENST00000588534 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.94□□□□□ -0.98
ZNF554-202ENST00000588534 DHX16O60231 1041 aaKnown RBP8.94□□□□□ -0.98
ZNF554-202ENST00000588534 PDE4CQ08493 712 aa8.94□□□□□ -0.98
ZNF554-202ENST00000588534 ZRSR1Q15695 479 aaKnown RBP8.94□□□□□ -0.98
ZNF554-202ENST00000588534 NLRP10Q86W26 655 aa8.94□□□□□ -0.98
ZNF554-202ENST00000588534 JARID2Q92833 1246 aaPredicted RBP8.94□□□□□ -0.98
ZNF554-202ENST00000588534 ABCF2Q9UG63 623 aa8.94□□□□□ -0.98
ZNF554-202ENST00000588534 SOGA3Q5TF21 947 aa8.94□□□□□ -0.98
ZNF554-202ENST00000588534 LPIN2Q92539 896 aa8.94□□□□□ -0.98
ZNF554-202ENST00000588534 CDHR2Q9BYE9 1310 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 PIK3C2AO00443 1686 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 H7C1W4 665 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 CPLX1O14810 134 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 HMGB1P09429 215 aaKnown RBP8.93□□□□□ -0.98
ZNF554-202ENST00000588534 RPS8P62241 208 aaKnown RBP8.93□□□□□ -0.98
ZNF554-202ENST00000588534 TXNRD1Q16881 649 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 TICAM2Q86XR7 235 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 FAM184AQ8NB25 1140 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 CNKSR1Q969H4 720 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 HCLS1P14317 486 aaPredicted RBP8.93□□□□□ -0.98
ZNF554-202ENST00000588534 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
ZNF554-202ENST00000588534 IMMTQ16891 758 aaKnown RBP8.93□□□□□ -0.98
ZNF554-202ENST00000588534 CCDC34Q96HJ3 373 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 DENND2AQ9ULE3 1009 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 CC2D2BQ6DHV5 1058 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 CYP46A1Q9Y6A2 500 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 COL15A1P39059 1388 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 AHDC1Q5TGY3 1603 aaPredicted RBP8.93□□□□□ -0.98
ZNF554-202ENST00000588534 RAD50Q92878 1312 aa8.93□□□□□ -0.98
ZNF554-202ENST00000588534 CWC27Q6UX04 472 aaKnown RBP8.92□□□□□ -0.98
ZNF554-202ENST00000588534 RNF41Q9H4P4 317 aaPredicted RBP8.92□□□□□ -0.98
ZNF554-202ENST00000588534 RGS12O14924 1447 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 CAMTA1Q9Y6Y1 1673 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 BBOX1O75936 387 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 EIF5P55010 431 aaKnown RBP8.92□□□□□ -0.98
ZNF554-202ENST00000588534 MTX1Q13505 466 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 GRIPAP1Q4V328 841 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 TNNI3KQ59H18 835 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 NFXL1Q6ZNB6 911 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 ISCA1Q9BUE6 129 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 PA2G4Q9UQ80 394 aaKnown RBP8.92□□□□□ -0.98
ZNF554-202ENST00000588534 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.92□□□□□ -0.98
ZNF554-202ENST00000588534 FPGT-TNNI3KV9GXZ4 949 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 PXDNLA1KZ92 1463 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 PRAMEF22A3QJZ6 481 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 EPB41L2O43491 1005 aaKnown RBP8.92□□□□□ -0.98
ZNF554-202ENST00000588534 PLCG2P16885 1265 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 TFCP2Q12800 502 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 HMG20BQ9P0W2 317 aa8.92□□□□□ -0.98
ZNF554-202ENST00000588534 GNAT2P19087 354 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 TDO2P48775 406 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 ZSCAN31Q96LW9 406 aaPredicted RBP8.91□□□□□ -0.98
ZNF554-202ENST00000588534 GGA1Q9UJY5 639 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 NSFL1CQ9UNZ2 370 aaKnown RBP8.91□□□□□ -0.98
ZNF554-202ENST00000588534 GOLIM4O00461 696 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 TRIM29Q14134 588 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 HDAC9Q9UKV0 1011 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 KCNQ2O43526 872 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 SERPINB2P05120 415 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 ATP2B4P23634 1241 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 PPP4R3BQ5MIZ7 849 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 KDM2BQ8NHM5 1336 aa8.91□□□□□ -0.98
ZNF554-202ENST00000588534 COL14A1Q05707 1796 aaKnown RBP8.91□□□□□ -0.98
ZNF554-202ENST00000588534 FAM182BQ5T319 152 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 BLOC1S2Q6QNY1 142 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 PLEKHM2Q8IWE5 1019 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 BCL9O00512 1426 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 PHLPP1O60346 1717 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 PNMA6EA0A0J9YXQ4 647 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 A0A1B0GUL7 405 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 XBP1P17861 261 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 PDCP20941 246 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 NUCB2P80303 420 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 TMED8Q6PL24 325 aaPredicted RBP8.9□□□□□ -0.98
ZNF554-202ENST00000588534 PAG1Q9NWQ8 432 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 MAST3O60307 1309 aa8.9□□□□□ -0.98
ZNF554-202ENST00000588534 RBM5P52756 815 aaKnown RBP eCLIP8.9□□□□□ -0.99
ZNF554-202ENST00000588534 UBE4AQ14139 1066 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms