RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 STAP2Q9UGK3 403 aa12.92□□□□□ -0.34
CHMP1B-202ENST00000588284 NUP98P52948 1817 aa12.91□□□□□ -0.34
CHMP1B-202ENST00000588284 IFIT5Q13325 482 aaKnown RBP12.91□□□□□ -0.34
CHMP1B-202ENST00000588284 USPL1Q5W0Q7 1092 aa12.91□□□□□ -0.34
CHMP1B-202ENST00000588284 FLAD1Q8NFF5 587 aa12.91□□□□□ -0.34
CHMP1B-202ENST00000588284 PA2G4Q9UQ80 394 aaKnown RBP12.91□□□□□ -0.34
CHMP1B-202ENST00000588284 AOX1Q06278 1338 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 UBN2Q6ZU65 1347 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 CIAO1O76071 339 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 MX1P20591 662 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 GTF2E1P29083 439 aaPredicted RBP12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 PDE1AP54750 535 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 TAF7LQ5H9L4 462 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 TTC22Q5TAA0 569 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 TPTE2Q6XPS3 522 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 TTLL11Q8NHH1 800 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 GPATCH3Q96I76 525 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 BCL11AQ9H165 835 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 IL1RAPL2Q9NP60 686 aa12.9□□□□□ -0.34
CHMP1B-202ENST00000588284 EYA2O00167 538 aa12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 SASH1O94885 1247 aa12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 CTSWP56202 376 aa12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 SLC10A5Q5PT55 438 aa12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 GPR108Q9NPR9 543 aa12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 RBM19Q9Y4C8 960 aaKnown RBP12.89□□□□□ -0.35
CHMP1B-202ENST00000588284 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 ERC2O15083 957 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 NTSR2O95665 410 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 SF3B2Q13435 895 aaKnown RBP12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 TBC1D9BQ66K14 1250 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 SIL1Q9H173 461 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 ANKRD36CQ5JPF3 1778 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 TAF1LQ8IZX4 1826 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 C4BP0C0L5 1744 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 SALL3Q9BXA9 1300 aa12.88□□□□□ -0.35
CHMP1B-202ENST00000588284 PHF14O94880 888 aa12.87□□□□□ -0.35
CHMP1B-202ENST00000588284 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
CHMP1B-202ENST00000588284 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
CHMP1B-202ENST00000588284 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
CHMP1B-202ENST00000588284 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
CHMP1B-202ENST00000588284 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
CHMP1B-202ENST00000588284 GLRX3O76003 335 aaKnown RBP12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 ITGA6P23229 1130 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 CASC1Q6TDU7 716 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 BICDL1Q6ZP65 573 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 AACSQ86V21 672 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 NUTM1Q86Y26 1132 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 ECHDC1Q9NTX5 307 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 AKAP2Q9Y2D5 859 aa12.86□□□□□ -0.35
CHMP1B-202ENST00000588284 CDC45O75419 566 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 TFCP2Q12800 502 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 LDHAL6AQ6ZMR3 332 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 EAF2Q96CJ1 260 aaPredicted RBP12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 NLRP3Q96P20 1036 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 GREM2Q9H772 168 aa12.85□□□□□ -0.35
CHMP1B-202ENST00000588284 RTL9Q8NET4 1388 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 NPHP1O15259 732 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 BAG6P46379 1132 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 ERFEQ4G0M1 354 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 TNNI3KQ59H18 835 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 NLGN1Q8N2Q7 840 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 ZNF594Q96JF6 807 aaPredicted RBP12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 CDC5LQ99459 802 aaKnown RBP12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 FPGT-TNNI3KV9GXZ4 949 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 BCORQ6W2J9 1755 aa12.84□□□□□ -0.35
CHMP1B-202ENST00000588284 GYS1P13807 737 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 GSPT1P15170 499 aaKnown RBP12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 SDSP20132 328 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 TM4SF1P30408 202 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 NFIXQ14938 502 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 CCDC85AQ96PX6 553 aaPredicted RBP12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 CAMKK2Q96RR4 588 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 MPHOSPH8Q99549 860 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 CCDC8Q9H0W5 538 aaPredicted RBP12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 CNNM1Q9NRU3 951 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 RIPOR2Q9Y4F9 1068 aa12.83□□□□□ -0.36
CHMP1B-202ENST00000588284 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
CHMP1B-202ENST00000588284 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
CHMP1B-202ENST00000588284 LRRC24Q50LG9 513 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms