RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 EPHX2P34913 555 aa19.06■□□□□ 0.64
HDAC5-207ENST00000588261 PPP1R42Q7Z4L9 355 aa19.06■□□□□ 0.64
HDAC5-207ENST00000588261 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
HDAC5-207ENST00000588261 RBM17Q96I25 401 aaKnown RBP19.06■□□□□ 0.64
HDAC5-207ENST00000588261 CHPF2Q9P2E5 772 aa19.06■□□□□ 0.64
HDAC5-207ENST00000588261 FOXN1O15353 648 aa19.05■□□□□ 0.64
HDAC5-207ENST00000588261 VAMP4O75379 141 aa19.05■□□□□ 0.64
HDAC5-207ENST00000588261 HCLS1P14317 486 aaPredicted RBP19.05■□□□□ 0.64
HDAC5-207ENST00000588261 SCNN1DP51172 638 aa19.05■□□□□ 0.64
HDAC5-207ENST00000588261 CCDC30Q5VVM6 783 aa19.05■□□□□ 0.64
HDAC5-207ENST00000588261 CC2D2BQ6DHV5 1058 aa19.05■□□□□ 0.64
HDAC5-207ENST00000588261 GPC2Q8N158 579 aa19.05■□□□□ 0.64
HDAC5-207ENST00000588261 YTHDC1Q96MU7 727 aaKnown RBP19.05■□□□□ 0.64
HDAC5-207ENST00000588261 DDX21Q9NR30 783 aaKnown RBP eCLIP19.05■□□□□ 0.64
HDAC5-207ENST00000588261 TCIRG1Q13488 830 aa19.04■□□□□ 0.64
HDAC5-207ENST00000588261 MAP1SQ66K74 1059 aaPredicted RBP19.04■□□□□ 0.64
HDAC5-207ENST00000588261 JDP2Q8WYK2 163 aa19.04■□□□□ 0.64
HDAC5-207ENST00000588261 DBF4Q9UBU7 674 aaPredicted RBP19.04■□□□□ 0.64
HDAC5-207ENST00000588261 ATP6V0A2Q9Y487 856 aa19.04■□□□□ 0.64
HDAC5-207ENST00000588261 TAF1P21675 1872 aa19.03■□□□□ 0.64
HDAC5-207ENST00000588261 DUOX1Q9NRD9 1551 aa19.03■□□□□ 0.64
HDAC5-207ENST00000588261 EPS15P42566 896 aa19.03■□□□□ 0.64
HDAC5-207ENST00000588261 VEGFBP49765 207 aa19.03■□□□□ 0.64
HDAC5-207ENST00000588261 FMR1Q06787 632 aaKnown RBP eCLIP19.03■□□□□ 0.64
HDAC5-207ENST00000588261 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
HDAC5-207ENST00000588261 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
HDAC5-207ENST00000588261 AOC3Q16853 763 aa19.02■□□□□ 0.64
HDAC5-207ENST00000588261 GRIPAP1Q4V328 841 aa19.02■□□□□ 0.64
HDAC5-207ENST00000588261 DDX60Q8IY21 1712 aaKnown RBP19.02■□□□□ 0.63
HDAC5-207ENST00000588261 DEFB115Q30KQ5 88 aa19.01■□□□□ 0.63
HDAC5-207ENST00000588261 CNTROBQ8N137 903 aa19.01■□□□□ 0.63
HDAC5-207ENST00000588261 LARGE2Q8N3Y3 721 aa19.01■□□□□ 0.63
HDAC5-207ENST00000588261 STK31Q9BXU1 1019 aa19.01■□□□□ 0.63
HDAC5-207ENST00000588261 RTFDC1Q9BY42 306 aaPredicted RBP19.01■□□□□ 0.63
HDAC5-207ENST00000588261 GJA3Q9Y6H8 435 aa19.01■□□□□ 0.63
HDAC5-207ENST00000588261 ALDH1L2Q3SY69 923 aa19■□□□□ 0.63
HDAC5-207ENST00000588261 ISCA1Q9BUE6 129 aa19■□□□□ 0.63
HDAC5-207ENST00000588261 HYPKQ9NX55 129 aa19■□□□□ 0.63
HDAC5-207ENST00000588261 WBP1LQ9NX94 342 aa19■□□□□ 0.63
HDAC5-207ENST00000588261 RASSF10A6NK89 507 aa18.99■□□□□ 0.63
HDAC5-207ENST00000588261 PPIP5K2O43314 1243 aa18.99■□□□□ 0.63
HDAC5-207ENST00000588261 EIF6P56537 245 aaKnown RBP18.99■□□□□ 0.63
HDAC5-207ENST00000588261 MAP2K1Q02750 393 aaPredicted RBP18.99■□□□□ 0.63
HDAC5-207ENST00000588261 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
HDAC5-207ENST00000588261 LMOD1P29536 600 aaPredicted RBP18.98■□□□□ 0.63
HDAC5-207ENST00000588261 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
HDAC5-207ENST00000588261 PLBD2Q8NHP8 589 aa18.98■□□□□ 0.63
HDAC5-207ENST00000588261 SH3TC1Q8TE82 1336 aa18.98■□□□□ 0.63
HDAC5-207ENST00000588261 LRRC37AA6NMS7 1700 aa18.97■□□□□ 0.63
HDAC5-207ENST00000588261 TRPM7Q96QT4 1865 aa18.97■□□□□ 0.63
HDAC5-207ENST00000588261 ATP5J2-PTCD1G3V325 749 aa18.97■□□□□ 0.63
HDAC5-207ENST00000588261 BRPF1P55201 1214 aaPredicted RBP18.97■□□□□ 0.63
HDAC5-207ENST00000588261 CXCL9Q07325 125 aa18.97■□□□□ 0.63
HDAC5-207ENST00000588261 SP8Q8IXZ3 490 aa18.97■□□□□ 0.63
HDAC5-207ENST00000588261 YDJCA8MPS7 323 aa18.96■□□□□ 0.63
HDAC5-207ENST00000588261 LBX1P52954 281 aa18.96■□□□□ 0.63
HDAC5-207ENST00000588261 GRAPQ13588 217 aa18.96■□□□□ 0.63
HDAC5-207ENST00000588261 ANKRD13DQ6ZTN6 518 aa18.96■□□□□ 0.63
HDAC5-207ENST00000588261 NIM1KQ8IY84 436 aa18.96■□□□□ 0.63
HDAC5-207ENST00000588261 GRAPLQ8TC17 118 aaPredicted RBP18.96■□□□□ 0.63
HDAC5-207ENST00000588261 CELF1Q92879 486 aaKnown RBP18.96■□□□□ 0.63
HDAC5-207ENST00000588261 FAM89AQ96GI7 184 aa18.96■□□□□ 0.63
HDAC5-207ENST00000588261 ABT1Q9ULW3 272 aaKnown RBP18.96■□□□□ 0.63
HDAC5-207ENST00000588261 WDR33Q9C0J8 1336 aaKnown RBP18.96■□□□□ 0.63
HDAC5-207ENST00000588261 SHTN1A0MZ66 631 aa18.95■□□□□ 0.62
HDAC5-207ENST00000588261 BBOX1O75936 387 aa18.95■□□□□ 0.62
HDAC5-207ENST00000588261 TMX4Q9H1E5 349 aaPredicted RBP18.95■□□□□ 0.62
HDAC5-207ENST00000588261 PHAXQ9H814 394 aaKnown RBP18.95■□□□□ 0.62
HDAC5-207ENST00000588261 TRAF5O00463 557 aa18.94■□□□□ 0.62
HDAC5-207ENST00000588261 KIAA2012Q0VF49 1180 aa18.94■□□□□ 0.62
HDAC5-207ENST00000588261 MPNDQ8N594 471 aa18.94■□□□□ 0.62
HDAC5-207ENST00000588261 BEGAINQ9BUH8 593 aa18.94■□□□□ 0.62
HDAC5-207ENST00000588261 GPRC5DQ9NZD1 345 aa18.94■□□□□ 0.62
HDAC5-207ENST00000588261 ZNRF3Q9ULT6 936 aa18.94■□□□□ 0.62
HDAC5-207ENST00000588261 SLC4A2P04920 1241 aa18.93■□□□□ 0.62
HDAC5-207ENST00000588261 ECE1P42892 770 aa18.93■□□□□ 0.62
HDAC5-207ENST00000588261 RARSP54136 660 aaKnown RBP18.93■□□□□ 0.62
HDAC5-207ENST00000588261 SF3B3Q15393 1217 aaKnown RBP18.93■□□□□ 0.62
HDAC5-207ENST00000588261 RTL5Q5HYW3 569 aaPredicted RBP18.93■□□□□ 0.62
HDAC5-207ENST00000588261 CST9Q5W186 159 aa18.93■□□□□ 0.62
HDAC5-207ENST00000588261 DPP8Q6V1X1 898 aaPredicted RBP18.93■□□□□ 0.62
HDAC5-207ENST00000588261 VPS33BQ9H267 617 aa18.93■□□□□ 0.62
HDAC5-207ENST00000588261 GMPSP49915 693 aaPredicted RBP18.92■□□□□ 0.62
HDAC5-207ENST00000588261 HIRAP54198 1017 aaPredicted RBP18.92■□□□□ 0.62
HDAC5-207ENST00000588261 USP50Q70EL3 339 aaPredicted RBP18.92■□□□□ 0.62
HDAC5-207ENST00000588261 DDX46Q7L014 1031 aaKnown RBP18.92■□□□□ 0.62
HDAC5-207ENST00000588261 SSH1Q8WYL5 1049 aa18.92■□□□□ 0.62
HDAC5-207ENST00000588261 RAD17O75943 681 aa18.91■□□□□ 0.62
HDAC5-207ENST00000588261 DDX58O95786 925 aaKnown RBP18.91■□□□□ 0.62
HDAC5-207ENST00000588261 HSPA8P11142 646 aaKnown RBP18.91■□□□□ 0.62
HDAC5-207ENST00000588261 TRIM28Q13263 835 aaKnown RBP18.91■□□□□ 0.62
HDAC5-207ENST00000588261 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
HDAC5-207ENST00000588261 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
HDAC5-207ENST00000588261 KIF16BQ96L93 1317 aa18.91■□□□□ 0.62
HDAC5-207ENST00000588261 FLIIQ13045 1269 aa18.9■□□□□ 0.62
HDAC5-207ENST00000588261 POLLQ9UGP5 575 aa18.9■□□□□ 0.62
HDAC5-207ENST00000588261 PTPRCP08575 1304 aa18.9■□□□□ 0.62
HDAC5-207ENST00000588261 GPSM2P81274 684 aa18.89■□□□□ 0.61
HDAC5-207ENST00000588261 PAXIP1Q6ZW49 1069 aaPredicted RBP18.89■□□□□ 0.61
HDAC5-207ENST00000588261 SUPT20HQ8NEM7 779 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms