RNA–Protein interactions for RNA: ENST00000588237.5

GRN-213, Transcript of granulin precursor, humanhuman

TSL 5

Gene GRN, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-213ENST00000588237 TRIM28Q13263 835 aaKnown RBP17.02■□□□□ 0.32
GRN-213ENST00000588237 SLC51AQ86UW1 340 aa17.02■□□□□ 0.32
GRN-213ENST00000588237 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
GRN-213ENST00000588237 CACNA1FO60840 1977 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
GRN-213ENST00000588237 NEXNQ0ZGT2 675 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 GRAPQ13588 217 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 LDHDQ86WU2 507 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
GRN-213ENST00000588237 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
GRN-213ENST00000588237 METTL22Q9BUU2 404 aaPredicted RBP17.01■□□□□ 0.31
GRN-213ENST00000588237 CWC25Q9NXE8 425 aaPredicted RBP17.01■□□□□ 0.31
GRN-213ENST00000588237 HSP90B1P14625 803 aaKnown RBP17■□□□□ 0.31
GRN-213ENST00000588237 DPP8Q6V1X1 898 aaPredicted RBP17■□□□□ 0.31
GRN-213ENST00000588237 ZBTB38Q8NAP3 1195 aaPredicted RBP17■□□□□ 0.31
GRN-213ENST00000588237 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
GRN-213ENST00000588237 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
GRN-213ENST00000588237 L3MBTL3Q96JM7 780 aaPredicted RBP17■□□□□ 0.31
GRN-213ENST00000588237 TAF1DQ9H5J8 278 aaPredicted RBP17■□□□□ 0.31
GRN-213ENST00000588237 MYH16Q9H6N6 1097 aa17■□□□□ 0.31
GRN-213ENST00000588237 ZNF541Q9H0D2 1346 aa16.99■□□□□ 0.31
GRN-213ENST00000588237 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
GRN-213ENST00000588237 EIF6P56537 245 aaKnown RBP16.99■□□□□ 0.31
GRN-213ENST00000588237 G2E3Q7L622 706 aa16.99■□□□□ 0.31
GRN-213ENST00000588237 SP8Q8IXZ3 490 aa16.99■□□□□ 0.31
GRN-213ENST00000588237 MPNDQ8N594 471 aa16.99■□□□□ 0.31
GRN-213ENST00000588237 CNTNAP1P78357 1384 aa16.99■□□□□ 0.31
GRN-213ENST00000588237 PASKQ96RG2 1323 aa16.98■□□□□ 0.31
GRN-213ENST00000588237 SF3B3Q15393 1217 aaKnown RBP16.98■□□□□ 0.31
GRN-213ENST00000588237 EAPPQ56P03 285 aaPredicted RBP16.98■□□□□ 0.31
GRN-213ENST00000588237 NIM1KQ8IY84 436 aa16.98■□□□□ 0.31
GRN-213ENST00000588237 SUPT20HQ8NEM7 779 aa16.98■□□□□ 0.31
GRN-213ENST00000588237 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
GRN-213ENST00000588237 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
GRN-213ENST00000588237 SNED1Q8TER0 1413 aa16.97■□□□□ 0.31
GRN-213ENST00000588237 TMEM88BA6NKF7 163 aa16.97■□□□□ 0.31
GRN-213ENST00000588237 FOXN1O15353 648 aa16.97■□□□□ 0.31
GRN-213ENST00000588237 VAMP4O75379 141 aa16.97■□□□□ 0.31
GRN-213ENST00000588237 PCCAP05165 728 aaPredicted RBP16.97■□□□□ 0.31
GRN-213ENST00000588237 FKBP5Q13451 457 aaPredicted RBP16.97■□□□□ 0.31
GRN-213ENST00000588237 AOC3Q16853 763 aa16.97■□□□□ 0.31
GRN-213ENST00000588237 AIDAQ96BJ3 306 aa16.97■□□□□ 0.31
GRN-213ENST00000588237 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
GRN-213ENST00000588237 FZD9O00144 591 aa16.96■□□□□ 0.31
GRN-213ENST00000588237 ITGBL1O95965 494 aaPredicted RBP16.96■□□□□ 0.31
GRN-213ENST00000588237 FLIIQ13045 1269 aa16.96■□□□□ 0.31
GRN-213ENST00000588237 TMC4Q7Z404 712 aa16.96■□□□□ 0.31
GRN-213ENST00000588237 CELF1Q92879 486 aaKnown RBP16.96■□□□□ 0.31
GRN-213ENST00000588237 CCDC85AQ96PX6 553 aaPredicted RBP16.96■□□□□ 0.31
GRN-213ENST00000588237 PRDM10Q9NQV6 1147 aa16.96■□□□□ 0.31
GRN-213ENST00000588237 HACL1Q9UJ83 578 aa16.96■□□□□ 0.31
GRN-213ENST00000588237 PDE8AO60658 829 aa16.95■□□□□ 0.3
GRN-213ENST00000588237 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
GRN-213ENST00000588237 VEGFBP49765 207 aa16.95■□□□□ 0.3
GRN-213ENST00000588237 CWF19L2Q2TBE0 894 aaKnown RBP16.95■□□□□ 0.3
GRN-213ENST00000588237 IGKV5-2P06315 115 aa16.94■□□□□ 0.3
GRN-213ENST00000588237 EPHX2P34913 555 aa16.94■□□□□ 0.3
GRN-213ENST00000588237 CCDC152Q4G0S7 254 aa16.94■□□□□ 0.3
GRN-213ENST00000588237 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
GRN-213ENST00000588237 GPC2Q8N158 579 aa16.94■□□□□ 0.3
GRN-213ENST00000588237 NSFL1CQ9UNZ2 370 aaKnown RBP16.94■□□□□ 0.3
GRN-213ENST00000588237 MYH3P11055 1940 aa16.94■□□□□ 0.3
GRN-213ENST00000588237 LMOD1P29536 600 aaPredicted RBP16.93■□□□□ 0.3
GRN-213ENST00000588237 RPS8P62241 208 aaKnown RBP16.93■□□□□ 0.3
GRN-213ENST00000588237 VPS33BQ9H267 617 aa16.93■□□□□ 0.3
GRN-213ENST00000588237 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
GRN-213ENST00000588237 COL4A5P29400 1685 aa16.93■□□□□ 0.3
GRN-213ENST00000588237 NEURL1BA8MQ27 555 aa16.92■□□□□ 0.3
GRN-213ENST00000588237 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
GRN-213ENST00000588237 CNTROBQ8N137 903 aa16.92■□□□□ 0.3
GRN-213ENST00000588237 DNAAF4Q8WXU2 420 aa16.92■□□□□ 0.3
GRN-213ENST00000588237 RTFDC1Q9BY42 306 aaPredicted RBP16.92■□□□□ 0.3
GRN-213ENST00000588237 DEFB115Q30KQ5 88 aa16.91■□□□□ 0.3
GRN-213ENST00000588237 UBE3BQ7Z3V4 1068 aa16.91■□□□□ 0.3
GRN-213ENST00000588237 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
GRN-213ENST00000588237 LRRC37AA6NMS7 1700 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 RIMBP2O15034 1052 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 GPSM2P81274 684 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 KIAA2012Q0VF49 1180 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 MAP1SQ66K74 1059 aaPredicted RBP16.9■□□□□ 0.3
GRN-213ENST00000588237 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 ANKIB1Q9P2G1 1089 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 ZNRF3Q9ULT6 936 aa16.9■□□□□ 0.3
GRN-213ENST00000588237 SPEF2Q9C093 1822 aa16.89■□□□□ 0.29
GRN-213ENST00000588237 COL4A1P02462 1669 aa16.89■□□□□ 0.29
GRN-213ENST00000588237 LBX1P52954 281 aa16.89■□□□□ 0.29
GRN-213ENST00000588237 CTSWP56202 376 aa16.89■□□□□ 0.29
GRN-213ENST00000588237 GCKRQ14397 625 aa16.89■□□□□ 0.29
GRN-213ENST00000588237 WASHC4Q2M389 1173 aa16.89■□□□□ 0.29
GRN-213ENST00000588237 RASSF10A6NK89 507 aa16.88■□□□□ 0.29
GRN-213ENST00000588237 F6X3S4 739 aa16.88■□□□□ 0.29
GRN-213ENST00000588237 G3V3G9 751 aa16.88■□□□□ 0.29
GRN-213ENST00000588237 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
GRN-213ENST00000588237 RAD17O75943 681 aa16.88■□□□□ 0.29
GRN-213ENST00000588237 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
GRN-213ENST00000588237 LINS1Q8NG48 757 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms