RNA–Protein interactions for RNA: ENST00000588012.5

PTPRS-205, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRS, Length 5,993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-205ENST00000588012 CLEC11AQ9Y240 323 aa18.34■□□□□ 0.53
PTPRS-205ENST00000588012 TBCAO75347 108 aaKnown RBP18.34■□□□□ 0.53
PTPRS-205ENST00000588012 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
PTPRS-205ENST00000588012 KLF18A0A0U1RQI7 1052 aa18.34■□□□□ 0.53
PTPRS-205ENST00000588012 CKAP2LQ8IYA6 745 aa18.34■□□□□ 0.53
PTPRS-205ENST00000588012 CCDC102AQ96A19 550 aa18.34■□□□□ 0.53
PTPRS-205ENST00000588012 ABCC1P33527 1531 aa18.34■□□□□ 0.53
PTPRS-205ENST00000588012 UGGT2Q9NYU1 1516 aa18.33■□□□□ 0.53
PTPRS-205ENST00000588012 STX1AQ16623 288 aa18.33■□□□□ 0.53
PTPRS-205ENST00000588012 NBPF14Q5TI25 921 aa18.33■□□□□ 0.53
PTPRS-205ENST00000588012 MEIS3Q99687 375 aa18.33■□□□□ 0.53
PTPRS-205ENST00000588012 RBM10P98175 930 aaKnown RBP18.33■□□□□ 0.53
PTPRS-205ENST00000588012 BICD1Q96G01 975 aa18.33■□□□□ 0.53
PTPRS-205ENST00000588012 GBP3Q9H0R5 595 aa18.33■□□□□ 0.53
PTPRS-205ENST00000588012 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.53
PTPRS-205ENST00000588012 NBPF7P0C2Y1 421 aaPredicted RBP18.33■□□□□ 0.52
PTPRS-205ENST00000588012 UBXN4Q92575 508 aa18.33■□□□□ 0.52
PTPRS-205ENST00000588012 TRPM2O94759 1503 aa18.33■□□□□ 0.52
PTPRS-205ENST00000588012 ZBTB43O43298 467 aa18.33■□□□□ 0.52
PTPRS-205ENST00000588012 MTHFSDQ2M296 383 aaKnown RBP18.33■□□□□ 0.52
PTPRS-205ENST00000588012 TAF3Q5VWG9 929 aa18.33■□□□□ 0.52
PTPRS-205ENST00000588012 CTNNBL1Q8WYA6 563 aaPredicted RBP18.33■□□□□ 0.52
PTPRS-205ENST00000588012 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 PTPN14Q15678 1187 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 MAGEB6P1A0A0J9YX57 407 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 UQCRHLA0A096LP55 91 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 UQCRHP07919 91 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 CPLX3Q8WVH0 158 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 TFIP11Q9UBB9 837 aaKnown RBP18.32■□□□□ 0.52
PTPRS-205ENST00000588012 EIF2AK4Q9P2K8 1649 aaKnown RBP18.32■□□□□ 0.52
PTPRS-205ENST00000588012 NUCB1Q02818 461 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 MRPL50Q8N5N7 158 aaKnown RBP18.32■□□□□ 0.52
PTPRS-205ENST00000588012 NFATC2IPQ8NCF5 419 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 NF2P35240 595 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 USP8P40818 1118 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 GNAQP50148 359 aa18.32■□□□□ 0.52
PTPRS-205ENST00000588012 MAP3K5Q99683 1374 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 LUZP1Q86V48 1076 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 SKAP1Q86WV1 359 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 ABCC10Q5T3U5 1492 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 ATP8B2P98198 1209 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 CCDC91Q7Z6B0 441 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 EXOC1Q9NV70 894 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 RTN1Q16799 776 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 KIF4BQ2VIQ3 1234 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 HEATR3Q7Z4Q2 680 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 PANK2Q9BZ23 570 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 ZSCAN16Q9H4T2 348 aaPredicted RBP18.31■□□□□ 0.52
PTPRS-205ENST00000588012 LMTK3Q96Q04 1460 aa18.31■□□□□ 0.52
PTPRS-205ENST00000588012 HDAC1Q13547 482 aaPredicted RBP18.3■□□□□ 0.52
PTPRS-205ENST00000588012 SLC9C2Q5TAH2 1124 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 NPATQ14207 1427 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 BRF1Q92994 677 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 RMND1Q9NWS8 449 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 BIN1O00499 593 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 PRC1O43663 620 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 CTNNA2P26232 953 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 CCDC174Q6PII3 467 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 TBC1D2Q9BYX2 928 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 ANKRD2Q9GZV1 360 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 BMP15O95972 392 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 TNPO1Q92973 898 aaKnown RBP18.3■□□□□ 0.52
PTPRS-205ENST00000588012 ZC3H12CQ9C0D7 883 aaKnown RBP18.3■□□□□ 0.52
PTPRS-205ENST00000588012 VEZTQ9HBM0 779 aa18.3■□□□□ 0.52
PTPRS-205ENST00000588012 IRS4O14654 1257 aaPredicted RBP18.29■□□□□ 0.52
PTPRS-205ENST00000588012 CRACR2AQ9BSW2 395 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 ZRANB1Q9UGI0 708 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 MACROD2A1Z1Q3 448 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 C8orf58Q8NAV2 365 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 ALS2CR12Q96Q35 445 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 EYA3Q99504 573 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 GNAT2P19087 354 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
PTPRS-205ENST00000588012 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 GSTTP1A0A1W2PQM5 241 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 PLCG2P16885 1265 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 JDP2Q8WYK2 163 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 PPFIA3O75145 1194 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 MCM3P25205 808 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 TRAPPC8Q9Y2L5 1435 aa18.29■□□□□ 0.52
PTPRS-205ENST00000588012 NUP153P49790 1475 aaKnown RBP18.29■□□□□ 0.52
PTPRS-205ENST00000588012 PPM1FP49593 454 aaPredicted RBP18.28■□□□□ 0.52
PTPRS-205ENST00000588012 DNA2P51530 1060 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 ALG1Q9BT22 464 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 PAFAH1B1P43034 410 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 MAP9Q49MG5 647 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 PUF60Q9UHX1 559 aaKnown RBP18.28■□□□□ 0.52
PTPRS-205ENST00000588012 SDSP20132 328 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 HSPA2P54652 639 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 ANKRD44Q8N8A2 993 aa18.28■□□□□ 0.52
PTPRS-205ENST00000588012 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
PTPRS-205ENST00000588012 IGHDP01880 384 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms