RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 SMC1BQ8NDV3 1235 aa20.73■□□□□ 0.91
CXXC1-209ENST00000587342 CELF1Q92879 486 aaKnown RBP20.73■□□□□ 0.91
CXXC1-209ENST00000587342 VAMP4O75379 141 aa20.72■□□□□ 0.91
CXXC1-209ENST00000587342 BBOX1O75936 387 aa20.72■□□□□ 0.91
CXXC1-209ENST00000587342 KSR2Q6VAB6 950 aa20.72■□□□□ 0.91
CXXC1-209ENST00000587342 SP8Q8IXZ3 490 aa20.72■□□□□ 0.91
CXXC1-209ENST00000587342 CCDC191Q8NCU4 936 aa20.72■□□□□ 0.91
CXXC1-209ENST00000587342 STK31Q9BXU1 1019 aa20.72■□□□□ 0.91
CXXC1-209ENST00000587342 DDX58O95786 925 aaKnown RBP20.71■□□□□ 0.91
CXXC1-209ENST00000587342 SLC4A2P04920 1241 aa20.71■□□□□ 0.91
CXXC1-209ENST00000587342 APLP1P51693 650 aa20.71■□□□□ 0.91
CXXC1-209ENST00000587342 AOC3Q16853 763 aa20.71■□□□□ 0.91
CXXC1-209ENST00000587342 GRIPAP1Q4V328 841 aa20.71■□□□□ 0.91
CXXC1-209ENST00000587342 RTFDC1Q9BY42 306 aaPredicted RBP20.71■□□□□ 0.91
CXXC1-209ENST00000587342 CWC25Q9NXE8 425 aaPredicted RBP20.71■□□□□ 0.91
CXXC1-209ENST00000587342 ADAMTSL1Q8N6G6 1762 aa20.71■□□□□ 0.91
CXXC1-209ENST00000587342 SCN4AP35499 1836 aa20.71■□□□□ 0.91
CXXC1-209ENST00000587342 PCCAP05165 728 aaPredicted RBP20.7■□□□□ 0.9
CXXC1-209ENST00000587342 LARGE2Q8N3Y3 721 aa20.7■□□□□ 0.9
CXXC1-209ENST00000587342 CHMP4AQ9BY43 222 aa20.7■□□□□ 0.9
CXXC1-209ENST00000587342 FLIIQ13045 1269 aa20.69■□□□□ 0.9
CXXC1-209ENST00000587342 CWF19L2Q2TBE0 894 aaKnown RBP20.69■□□□□ 0.9
CXXC1-209ENST00000587342 TAF1DQ9H5J8 278 aaPredicted RBP20.69■□□□□ 0.9
CXXC1-209ENST00000587342 SEC31BQ9NQW1 1179 aa20.69■□□□□ 0.9
CXXC1-209ENST00000587342 PPIP5K2O43314 1243 aa20.68■□□□□ 0.9
CXXC1-209ENST00000587342 DPP8Q6V1X1 898 aaPredicted RBP20.68■□□□□ 0.9
CXXC1-209ENST00000587342 DNAJC5GQ8N7S2 189 aa20.68■□□□□ 0.9
CXXC1-209ENST00000587342 JDP2Q8WYK2 163 aa20.68■□□□□ 0.9
CXXC1-209ENST00000587342 NEURL1BA8MQ27 555 aa20.67■□□□□ 0.9
CXXC1-209ENST00000587342 GPC2Q8N158 579 aa20.67■□□□□ 0.9
CXXC1-209ENST00000587342 MPNDQ8N594 471 aa20.67■□□□□ 0.9
CXXC1-209ENST00000587342 CCDC85AQ96PX6 553 aaPredicted RBP20.66■□□□□ 0.9
CXXC1-209ENST00000587342 CDHR2Q9BYE9 1310 aa20.66■□□□□ 0.9
CXXC1-209ENST00000587342 IQCA1LA6NCM1 817 aa20.65■□□□□ 0.9
CXXC1-209ENST00000587342 GPSM2P81274 684 aa20.65■□□□□ 0.9
CXXC1-209ENST00000587342 KIAA2012Q0VF49 1180 aa20.65■□□□□ 0.9
CXXC1-209ENST00000587342 TMC4Q7Z404 712 aa20.65■□□□□ 0.9
CXXC1-209ENST00000587342 NIM1KQ8IY84 436 aa20.65■□□□□ 0.9
CXXC1-209ENST00000587342 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
CXXC1-209ENST00000587342 PDE8AO60658 829 aa20.64■□□□□ 0.89
CXXC1-209ENST00000587342 SCNN1DP51172 638 aa20.64■□□□□ 0.89
CXXC1-209ENST00000587342 CHADLQ6NUI6 762 aa20.64■□□□□ 0.89
CXXC1-209ENST00000587342 TMX4Q9H1E5 349 aaPredicted RBP20.64■□□□□ 0.89
CXXC1-209ENST00000587342 HACL1Q9UJ83 578 aa20.64■□□□□ 0.89
CXXC1-209ENST00000587342 GJA3Q9Y6H8 435 aa20.64■□□□□ 0.89
CXXC1-209ENST00000587342 CACNA1FO60840 1977 aa20.64■□□□□ 0.89
CXXC1-209ENST00000587342 EPHX2P34913 555 aa20.63■□□□□ 0.89
CXXC1-209ENST00000587342 EIF6P56537 245 aaKnown RBP20.63■□□□□ 0.89
CXXC1-209ENST00000587342 FKBP5Q13451 457 aaPredicted RBP20.63■□□□□ 0.89
CXXC1-209ENST00000587342 SUPT20HQ8NEM7 779 aa20.63■□□□□ 0.89
CXXC1-209ENST00000587342 GPR101Q96P66 508 aaPredicted RBP20.63■□□□□ 0.89
CXXC1-209ENST00000587342 YDJCA8MPS7 323 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 CTSWP56202 376 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 RPS8P62241 208 aaKnown RBP20.62■□□□□ 0.89
CXXC1-209ENST00000587342 CXCL9Q07325 125 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 NEXNQ0ZGT2 675 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 DNAAF4Q8WXU2 420 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 VPS33BQ9H267 617 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 POLLQ9UGP5 575 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 MYH3P11055 1940 aa20.62■□□□□ 0.89
CXXC1-209ENST00000587342 F6X3S4 739 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 H7C1W4 665 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 CASP7P55210 303 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 GCKRQ14397 625 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 CCDC152Q4G0S7 254 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 EAPPQ56P03 285 aaPredicted RBP20.61■□□□□ 0.89
CXXC1-209ENST00000587342 UBE3BQ7Z3V4 1068 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 LDHDQ86WU2 507 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 ZNRF3Q9ULT6 936 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 NSFL1CQ9UNZ2 370 aaKnown RBP20.61■□□□□ 0.89
CXXC1-209ENST00000587342 SPEF2Q9C093 1822 aa20.61■□□□□ 0.89
CXXC1-209ENST00000587342 EPS15P42566 896 aa20.6■□□□□ 0.89
CXXC1-209ENST00000587342 TTLL11Q8NHH1 800 aa20.6■□□□□ 0.89
CXXC1-209ENST00000587342 GREM2Q9H772 168 aa20.59■□□□□ 0.89
CXXC1-209ENST00000587342 PASKQ96RG2 1323 aa20.58■□□□□ 0.89
CXXC1-209ENST00000587342 RAD17O75943 681 aa20.58■□□□□ 0.89
CXXC1-209ENST00000587342 HSP90B1P14625 803 aaKnown RBP20.58■□□□□ 0.89
CXXC1-209ENST00000587342 LINS1Q8NG48 757 aa20.58■□□□□ 0.89
CXXC1-209ENST00000587342 TBC1D16Q8TBP0 767 aa20.58■□□□□ 0.89
CXXC1-209ENST00000587342 RTL9Q8NET4 1388 aa20.58■□□□□ 0.88
CXXC1-209ENST00000587342 KLRG1Q96E93 195 aa20.57■□□□□ 0.88
CXXC1-209ENST00000587342 SCN9AQ15858 1988 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 WTIPA6NIX2 430 aaPredicted RBP20.56■□□□□ 0.88
CXXC1-209ENST00000587342 C6orf229H3BNL8 230 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 RIMBP2O15034 1052 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 ITGBL1O95965 494 aaPredicted RBP20.56■□□□□ 0.88
CXXC1-209ENST00000587342 GMPSP49915 693 aaPredicted RBP20.56■□□□□ 0.88
CXXC1-209ENST00000587342 WASHC4Q2M389 1173 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 BEND3Q5T5X7 828 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 DBNDD1Q9H9R9 158 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 PODXL2Q9NZ53 605 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 GPRC5DQ9NZD1 345 aa20.56■□□□□ 0.88
CXXC1-209ENST00000587342 SHTN1A0MZ66 631 aa20.55■□□□□ 0.88
CXXC1-209ENST00000587342 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
CXXC1-209ENST00000587342 MAP1SQ66K74 1059 aaPredicted RBP20.55■□□□□ 0.88
CXXC1-209ENST00000587342 CIAPIN1Q6FI81 312 aa20.55■□□□□ 0.88
CXXC1-209ENST00000587342 CDCA7LQ96GN5 454 aa20.55■□□□□ 0.88
CXXC1-209ENST00000587342 PLA2G12BQ9BX93 195 aa20.55■□□□□ 0.88
CXXC1-209ENST00000587342 KCNQ5Q9NR82 932 aa20.55■□□□□ 0.88
CXXC1-209ENST00000587342 UFL1O94874 794 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms