RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 FSD1Q9BTV5 496 aa20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 ALDH8A1Q9H2A2 487 aaPredicted RBP20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 PDCP20941 246 aa20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 BLOC1S2Q6QNY1 142 aa20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 DCAF5Q96JK2 942 aa20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 MAP7D2Q96T17 732 aa20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 SIL1Q9H173 461 aa20.07■□□□□ 0.8
PRKCSH-205ENST00000587327 ABCA3Q99758 1704 aa20.06■□□□□ 0.8
PRKCSH-205ENST00000587327 KRT85P78386 507 aa20.06■□□□□ 0.8
PRKCSH-205ENST00000587327 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
PRKCSH-205ENST00000587327 RIC3Q7Z5B4 369 aa20.06■□□□□ 0.8
PRKCSH-205ENST00000587327 ZNF496Q96IT1 587 aaPredicted RBP20.06■□□□□ 0.8
PRKCSH-205ENST00000587327 TTC12Q9H892 705 aaPredicted RBP20.06■□□□□ 0.8
PRKCSH-205ENST00000587327 MED23Q9ULK4 1368 aa20.06■□□□□ 0.8
PRKCSH-205ENST00000587327 RPS6KB1P23443 525 aa20.05■□□□□ 0.8
PRKCSH-205ENST00000587327 NOLC1Q14978 699 aaKnown RBP eCLIP20.05■□□□□ 0.81e-10■□□□□ 9.6
PRKCSH-205ENST00000587327 CDC37L1Q7L3B6 337 aa20.05■□□□□ 0.8
PRKCSH-205ENST00000587327 ELP1O95163 1332 aa20.05■□□□□ 0.8
PRKCSH-205ENST00000587327 TSGA10IPQ3SY00 556 aa20.05■□□□□ 0.8
PRKCSH-205ENST00000587327 TTC6Q86TZ1 520 aa20.05■□□□□ 0.8
PRKCSH-205ENST00000587327 SOS2Q07890 1332 aaPredicted RBP20.05■□□□□ 0.8
PRKCSH-205ENST00000587327 ZNF335Q9H4Z2 1342 aaPredicted RBP20.05■□□□□ 0.8
PRKCSH-205ENST00000587327 CCDC192P0DO97 292 aa20.04■□□□□ 0.8
PRKCSH-205ENST00000587327 KLHDC4Q8TBB5 520 aa20.04■□□□□ 0.8
PRKCSH-205ENST00000587327 NEURL1BA8MQ27 555 aa20.04■□□□□ 0.8
PRKCSH-205ENST00000587327 NEXNQ0ZGT2 675 aa20.04■□□□□ 0.8
PRKCSH-205ENST00000587327 HMG20BQ9P0W2 317 aa20.04■□□□□ 0.8
PRKCSH-205ENST00000587327 TAF6LQ9Y6J9 622 aa20.04■□□□□ 0.8
PRKCSH-205ENST00000587327 JCADQ9P266 1359 aa20.04■□□□□ 0.8
PRKCSH-205ENST00000587327 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-205ENST00000587327 GCKRQ14397 625 aa20.03■□□□□ 0.8
PRKCSH-205ENST00000587327 DNTTIP2Q5QJE6 756 aaKnown RBP20.03■□□□□ 0.8
PRKCSH-205ENST00000587327 ZNF589Q86UQ0 364 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-205ENST00000587327 FERMT3Q86UX7 667 aa20.03■□□□□ 0.8
PRKCSH-205ENST00000587327 TCEANC2Q96MN5 208 aa20.03■□□□□ 0.8
PRKCSH-205ENST00000587327 COL5A2P05997 1499 aaPredicted RBP20.03■□□□□ 0.8
PRKCSH-205ENST00000587327 AP5Z1O43299 807 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 VSIG10Q8N0Z9 540 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 WDR17Q8IZU2 1322 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 KDM4FA0A1W2PPD8 638 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 PLCB2Q00722 1185 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 LRP10Q7Z4F1 713 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 PRDM11Q9NQV5 511 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 SPTLC3Q9NUV7 552 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 LAMB4A4D0S4 1761 aa20.02■□□□□ 0.8
PRKCSH-205ENST00000587327 TAF5LO75529 589 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 MYL6BP14649 208 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 EPHA10Q5JZY3 1008 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 SLAIN2Q9P270 581 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 FAM173BQ6P4H8 233 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 XAGE3Q8WTP9 111 aa20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 METTL22Q9BUU2 404 aaPredicted RBP20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 SCAND2PQ9GZW5 306 aaPredicted RBP20.01■□□□□ 0.79
PRKCSH-205ENST00000587327 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
PRKCSH-205ENST00000587327 MAP3K11Q16584 847 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 MTERF4Q7Z6M4 381 aaKnown RBP20■□□□□ 0.79
PRKCSH-205ENST00000587327 MYRIPQ8NFW9 859 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 PRIMPOLQ96LW4 560 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 COPRSQ9NQ92 184 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 USP16Q9Y5T5 823 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 LIG1P18858 919 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 ATP5JP18859 108 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 COPS6Q7L5N1 327 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 NUP62CLQ9H1M0 184 aa20■□□□□ 0.79
PRKCSH-205ENST00000587327 KRT32Q14532 448 aa19.99■□□□□ 0.79
PRKCSH-205ENST00000587327 EDC3Q96F86 508 aaKnown RBP19.99■□□□□ 0.79
PRKCSH-205ENST00000587327 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
PRKCSH-205ENST00000587327 MYD88Q99836 296 aa19.99■□□□□ 0.79
PRKCSH-205ENST00000587327 TPM3P06753 285 aa19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 CABP4P57796 275 aa19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 C17orf53Q8N3J3 647 aaPredicted RBP19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 FAM200AQ8TCP9 573 aa19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 CHMP3Q9Y3E7 222 aa19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 SHANK3Q9BYB0 1731 aa19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 HMGN5P82970 282 aaKnown RBP19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 DBNLQ9UJU6 430 aaKnown RBP19.98■□□□□ 0.79
PRKCSH-205ENST00000587327 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 STK3Q13188 491 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 CAMK4Q16566 473 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 ANKRD13DQ6ZTN6 518 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 TOM1L2Q6ZVM7 507 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 SPATA32Q96LK8 384 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 PCDH11XQ9BZA7 1347 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 PCDH11YQ9BZA8 1340 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 ARFGEF2Q9Y6D5 1785 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 NHSL1Q5SYE7 1610 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 GOLGA6L4A6NEF3 574 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 TYRO3Q06418 890 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 TNNI3KQ59H18 835 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 DACT1Q9NYF0 836 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 TFIP11Q9UBB9 837 aaKnown RBP19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 MRVI1Q9Y6F6 885 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 FPGT-TNNI3KV9GXZ4 949 aa19.97■□□□□ 0.79
PRKCSH-205ENST00000587327 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
PRKCSH-205ENST00000587327 RFX5P48382 616 aaPredicted RBP19.96■□□□□ 0.79
PRKCSH-205ENST00000587327 PTPN12Q05209 780 aaKnown RBP19.96■□□□□ 0.79
PRKCSH-205ENST00000587327 KIAA1524Q8TCG1 905 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms