RNA–Protein interactions for RNA: ENST00000587184.5

LAMA3-207, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,007 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-207ENST00000587184 A0A1B0GUL7 405 aa10.65□□□□□ -0.7
LAMA3-207ENST00000587184 DEKP35659 375 aaKnown RBP10.65□□□□□ -0.7
LAMA3-207ENST00000587184 AIDAQ96BJ3 306 aa10.65□□□□□ -0.7
LAMA3-207ENST00000587184 DBNDD2Q9BQY9 259 aa10.65□□□□□ -0.7
LAMA3-207ENST00000587184 UPF3BQ9BZI7 483 aaKnown RBP10.65□□□□□ -0.7
LAMA3-207ENST00000587184 APBA3O96018 575 aa10.65□□□□□ -0.71
LAMA3-207ENST00000587184 CHAF1AQ13111 956 aaPredicted RBP10.65□□□□□ -0.71
LAMA3-207ENST00000587184 CPLX1O14810 134 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 POLA2Q14181 598 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.64□□□□□ -0.71
LAMA3-207ENST00000587184 ATP6V1DQ9Y5K8 247 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 CAMTA1Q9Y6Y1 1673 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 PLEKHG2Q9H7P9 1386 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 H3BQV1 296 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 H7C1W4 665 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 CTSWP56202 376 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 IFFO2Q5TF58 517 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 IL27Q8NEV9 243 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 ERICH2A1L162 156 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 DDX11L8A8MPP1 907 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 TRIM37O94972 964 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 ANKRD1Q15327 319 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 NLRP10Q86W26 655 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 TBC1D2Q9BYX2 928 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 PDIA6Q15084 440 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 NFXL1Q6ZNB6 911 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 EAF2Q96CJ1 260 aaPredicted RBP10.64□□□□□ -0.71
LAMA3-207ENST00000587184 PAG1Q9NWQ8 432 aa10.64□□□□□ -0.71
LAMA3-207ENST00000587184 CASTP20810 708 aaKnown RBP10.63□□□□□ -0.71
LAMA3-207ENST00000587184 RXRBP28702 533 aa10.63□□□□□ -0.71
LAMA3-207ENST00000587184 CNBD1Q8NA66 436 aa10.63□□□□□ -0.71
LAMA3-207ENST00000587184 PDRG1Q9NUG6 133 aa10.63□□□□□ -0.71
LAMA3-207ENST00000587184 GSPT1P15170 499 aaKnown RBP10.63□□□□□ -0.71
LAMA3-207ENST00000587184 MTX1Q13505 466 aa10.63□□□□□ -0.71
LAMA3-207ENST00000587184 U3KPZ7 1027 aaPredicted RBP10.63□□□□□ -0.71
LAMA3-207ENST00000587184 ZFYP08048 801 aaPredicted RBP10.63□□□□□ -0.71
LAMA3-207ENST00000587184 TRIM34Q9BYJ4 488 aa10.63□□□□□ -0.71
LAMA3-207ENST00000587184 HLFQ16534 295 aa10.62□□□□□ -0.71
LAMA3-207ENST00000587184 IMMTQ16891 758 aaKnown RBP10.62□□□□□ -0.71
LAMA3-207ENST00000587184 USPL1Q5W0Q7 1092 aa10.62□□□□□ -0.71
LAMA3-207ENST00000587184 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
LAMA3-207ENST00000587184 CWC22Q9HCG8 908 aaKnown RBP10.62□□□□□ -0.71
LAMA3-207ENST00000587184 STAP2Q9UGK3 403 aa10.62□□□□□ -0.71
LAMA3-207ENST00000587184 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
LAMA3-207ENST00000587184 SLC3A2P08195 630 aaKnown RBP10.62□□□□□ -0.71
LAMA3-207ENST00000587184 LTN1O94822 1766 aa10.62□□□□□ -0.71
LAMA3-207ENST00000587184 NMIQ13287 307 aaPredicted RBP10.62□□□□□ -0.71
LAMA3-207ENST00000587184 FOXD4L6Q3SYB3 417 aaPredicted RBP10.62□□□□□ -0.71
LAMA3-207ENST00000587184 FOXD4L3Q6VB84 417 aaPredicted RBP10.62□□□□□ -0.71
LAMA3-207ENST00000587184 GZF1Q9H116 711 aaPredicted RBP10.62□□□□□ -0.71
LAMA3-207ENST00000587184 C6orf229H3BNL8 230 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 TDO2P48775 406 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 SART3Q15020 963 aaKnown RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 MCMDC2Q4G0Z9 681 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 XAGE2Q96GT9 111 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 USP26Q9BXU7 913 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 PPP1R1BQ9UD71 204 aaPredicted RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 MED1Q15648 1581 aaPredicted RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 EPHA10Q5JZY3 1008 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 ATP10DQ9P241 1426 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 PUM3Q15397 648 aaKnown RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 RRP12Q5JTH9 1297 aaKnown RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 ZSCAN31Q96LW9 406 aaPredicted RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 VPS37CA5D8V6 355 aaPredicted RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 ANAPC15P60006 121 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 AKAP17AQ02040 695 aaKnown RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 PTPN12Q05209 780 aaKnown RBP10.61□□□□□ -0.71
LAMA3-207ENST00000587184 LRRC24Q50LG9 513 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 ISCA1Q9BUE6 129 aa10.61□□□□□ -0.71
LAMA3-207ENST00000587184 ATP5JP18859 108 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 RBM6P78332 1123 aaKnown RBP10.6□□□□□ -0.71
LAMA3-207ENST00000587184 TRIM28Q13263 835 aaKnown RBP10.6□□□□□ -0.71
LAMA3-207ENST00000587184 SYAP1Q96A49 352 aaPredicted RBP10.6□□□□□ -0.71
LAMA3-207ENST00000587184 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 ANKRD2Q9GZV1 360 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 GREM2Q9H772 168 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 RPS6KA4O75676 772 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 NFKBIBQ15653 356 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 PXDNLA1KZ92 1463 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 MROH5Q6ZUA9 1318 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 CCDC24Q8N4L8 307 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 IQSEC3Q9UPP2 1182 aaPredicted RBP10.6□□□□□ -0.71
LAMA3-207ENST00000587184 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
LAMA3-207ENST00000587184 RBM25P49756 843 aaKnown RBP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 SLC9C2Q5TAH2 1124 aa10.59□□□□□ -0.71
LAMA3-207ENST00000587184 MCTP1Q6DN14 999 aa10.59□□□□□ -0.71
LAMA3-207ENST00000587184 LPIN2Q92539 896 aa10.59□□□□□ -0.71
LAMA3-207ENST00000587184 ZNF622Q969S3 477 aaKnown RBP eCLIP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 NAPBQ9H115 298 aa10.59□□□□□ -0.71
LAMA3-207ENST00000587184 HMG20BQ9P0W2 317 aa10.59□□□□□ -0.71
LAMA3-207ENST00000587184 RBM8AQ9Y5S9 174 aaKnown RBP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 CIAO1O76071 339 aa10.59□□□□□ -0.71
LAMA3-207ENST00000587184 DZIP1Q86YF9 867 aaKnown RBP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 CIZ1Q9ULV3 898 aaPredicted RBP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 RAD50Q92878 1312 aa10.59□□□□□ -0.71
LAMA3-207ENST00000587184 RNF113AO15541 343 aaKnown RBP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 PUS3Q9BZE2 481 aaKnown RBP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
LAMA3-207ENST00000587184 SASH1O94885 1247 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms