RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	TMC4	Q7Z404	712 aa		28.63	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	CAPNS2	Q96L46	248 aa		28.63	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	CHL1	O00533	1208 aa		28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	HSPA8	P11142	646 aa	Known RBP	28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	GMPS	P49915	693 aa	Predicted RBP	28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	GRAP	Q13588	217 aa		28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	TNIP1	Q15025	636 aa		28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	NEUROD2	Q15784	382 aa		28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	CIAPIN1	Q6FI81	312 aa		28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	GRAPL	Q8TC17	118 aa	Predicted RBP	28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	BEGAIN	Q9BUH8	593 aa		28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	LRRC37A	A6NMS7	1700 aa		28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	DDX60	Q8IY21	1712 aa	Known RBP	28.62	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	TRAF5	O00463	557 aa		28.61	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	CST9	Q5W186	159 aa		28.61	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	TLL2	Q9Y6L7	1015 aa		28.61	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	CCDC146	Q8IYE0	955 aa		28.6	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	BCL2L13	Q9BXK5	485 aa		28.6	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	LAS1L	Q9Y4W2	734 aa	Known RBP	28.6	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	GPR101	Q96P66	508 aa	Predicted RBP	28.59	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	CHPF2	Q9P2E5	772 aa		28.59	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.59	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	HOXB7	P09629	217 aa		28.58	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	GRM1	Q13255	1194 aa		28.58	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	CYP4F22	Q6NT55	531 aa		28.58	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	PLBD2	Q8NHP8	589 aa		28.58	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	RUNDC1	Q96C34	613 aa		28.58	■■■□□ 2.17
PLEKHM1-214	ENST00000586084	RAD17	O75943	681 aa		28.57	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	KRT24	Q2M2I5	525 aa		28.57	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	HDGFL1	Q5TGJ6	251 aa		28.57	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	ZC3H15	Q8WU90	426 aa	Known RBP	28.57	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	WDR43	Q15061	677 aa	Known RBP eCLIP	28.56	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	ANKRD13D	Q6ZTN6	518 aa		28.56	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	DUOX1	Q9NRD9	1551 aa		28.56	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	DBF4	Q9UBU7	674 aa	Predicted RBP	28.56	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	PGAP2	Q9UHJ9	254 aa		28.56	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	TRIM35	Q9UPQ4	493 aa		28.55	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	CELF2	O95319	508 aa	Known RBP	28.54	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	MAP2K2	P36507	400 aa		28.54	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	SAPCD2	Q86UD0	394 aa		28.53	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	GLIS2	Q9BZE0	524 aa	Predicted RBP	28.53	■■■□□ 2.16
PLEKHM1-214	ENST00000586084		H7C1D1	291 aa		28.52	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	HHIPL1	Q96JK4	782 aa		28.52	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	ISCA1	Q9BUE6	129 aa		28.52	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	CNOT7	Q9UIV1	285 aa	Known RBP	28.52	■■■□□ 2.16
PLEKHM1-214	ENST00000586084	SF3B3	Q15393	1217 aa	Known RBP	28.51	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	WASHC4	Q2M389	1173 aa		28.51	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	CDC37L1	Q7L3B6	337 aa		28.51	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	HYPK	Q9NX55	129 aa		28.51	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	YDJC	A8MPS7	323 aa		28.5	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	ZNF428	Q96B54	188 aa		28.5	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	FAM89A	Q96GI7	184 aa		28.5	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	ABHD8	Q96I13	439 aa		28.5	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	NSFL1C	Q9UNZ2	370 aa	Known RBP	28.5	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	ATP5J2-PTCD1	G3V325	749 aa		28.49	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	HIRA	P54198	1017 aa	Predicted RBP	28.49	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	CFAP44	Q96MT7	982 aa		28.49	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	DDX10	Q13206	875 aa	Known RBP	28.48	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	MICALL2	Q8IY33	904 aa		28.48	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	TRPM4	Q8TD43	1214 aa		28.48	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	DPF2	Q92785	391 aa		28.48	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	CELF1	Q92879	486 aa	Known RBP	28.48	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	ZNF408	Q9H9D4	720 aa		28.48	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	CA12	O43570	354 aa		28.47	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	AOC2	O75106	756 aa		28.47	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	DUSP27	Q5VZP5	1158 aa		28.47	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	C6orf229	H3BNL8	230 aa		28.46	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	TRIM28	Q13263	835 aa	Known RBP	28.46	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	EYA3	Q99504	573 aa		28.46	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	ADAMTS8	Q9UP79	889 aa		28.46	■■■□□ 2.15
PLEKHM1-214	ENST00000586084	DBNDD1	Q9H9R9	158 aa		28.45	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	POLR2A	P24928	1970 aa	Known RBP	28.44	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	PSMD14	O00487	310 aa		28.44	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	IRS4	O14654	1257 aa	Predicted RBP	28.44	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	HSP90B1	P14625	803 aa	Known RBP	28.44	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	ZBTB12	Q9Y330	459 aa	Predicted RBP	28.44	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	SHTN1	A0MZ66	631 aa		28.43	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	RIMBP2	O15034	1052 aa		28.43	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	RPS12	P25398	132 aa	Known RBP	28.43	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	BRPF1	P55201	1214 aa	Predicted RBP	28.43	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	GPSM2	P81274	684 aa		28.43	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	RTL5	Q5HYW3	569 aa	Predicted RBP	28.43	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	POLL	Q9UGP5	575 aa		28.43	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	RPS8	P62241	208 aa	Known RBP	28.42	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	GOLGA2	Q08379	1002 aa		28.42	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	RIC3	Q7Z5B4	369 aa		28.42	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	MBIP	Q9NS73	344 aa		28.42	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	ECE2	O60344	883 aa		28.41	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	SAMD7	Q7Z3H4	446 aa		28.41	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	USP48	Q86UV5	1035 aa		28.41	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	COL4A1	P02462	1669 aa		28.41	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.4	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	TSKS	Q9UJT2	592 aa		28.4	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	NOG	Q13253	232 aa		28.39	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	TBC1D16	Q8TBP0	767 aa		28.39	■■■□□ 2.14
PLEKHM1-214	ENST00000586084	CALD1	Q05682	793 aa	Known RBP	28.38	■■■□□ 2.13
PLEKHM1-214	ENST00000586084	DOK7	Q18PE1	504 aa		28.38	■■■□□ 2.13
PLEKHM1-214	ENST00000586084	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	28.38	■■■□□ 2.13
PLEKHM1-214	ENST00000586084	KRT26	Q7Z3Y9	468 aa		28.38	■■■□□ 2.13
PLEKHM1-214	ENST00000586084	ZC3H12C	Q9C0D7	883 aa	Known RBP	28.38	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms