RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
SDF2-203ENST00000585749 NIP7Q9Y221 180 aaKnown RBP eCLIP12.23□□□□□ -0.45
SDF2-203ENST00000585749 ZNF652Q9Y2D9 606 aa12.23□□□□□ -0.45
SDF2-203ENST00000585749 PCDHB13Q9Y5F0 798 aa12.23□□□□□ -0.45
SDF2-203ENST00000585749 KCNQ3O43525 872 aa12.22□□□□□ -0.45
SDF2-203ENST00000585749 CRY2Q49AN0 593 aa12.22□□□□□ -0.45
SDF2-203ENST00000585749 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
SDF2-203ENST00000585749 ZIC5Q96T25 663 aa12.22□□□□□ -0.45
SDF2-203ENST00000585749 USP16Q9Y5T5 823 aa12.22□□□□□ -0.45
SDF2-203ENST00000585749 PRAMEF22A3QJZ6 481 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 FAM177BA6PVY3 158 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 RGL2O15211 777 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 SLC51AQ86UW1 340 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 LARGE2Q8N3Y3 721 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 GLIS2Q9BZE0 524 aaPredicted RBP12.21□□□□□ -0.45
SDF2-203ENST00000585749 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
SDF2-203ENST00000585749 GPRC5DQ9NZD1 345 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 TRPC6Q9Y210 931 aa12.21□□□□□ -0.45
SDF2-203ENST00000585749 ABCC12Q96J65 1359 aa12.2□□□□□ -0.46
SDF2-203ENST00000585749 MAPK8IP3Q9UPT6 1336 aa12.2□□□□□ -0.46
SDF2-203ENST00000585749 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
SDF2-203ENST00000585749 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
SDF2-203ENST00000585749 NOGQ13253 232 aa12.19□□□□□ -0.46
SDF2-203ENST00000585749 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
SDF2-203ENST00000585749 MCM10Q7L590 875 aa12.19□□□□□ -0.46
SDF2-203ENST00000585749 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
SDF2-203ENST00000585749 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
SDF2-203ENST00000585749 RIC1Q4ADV7 1423 aa12.19□□□□□ -0.46
SDF2-203ENST00000585749 BTBD11A6QL63 1104 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 NBPF26B4DH59 902 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 HOXA10P31260 410 aaPredicted RBP12.18□□□□□ -0.46
SDF2-203ENST00000585749 HLFQ16534 295 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 NBPF10Q6P3W6 841 aaKnown RBP12.18□□□□□ -0.46
SDF2-203ENST00000585749 NIM1KQ8IY84 436 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 NBPF15Q8N660 670 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 SAGE1Q9NXZ1 904 aa12.18□□□□□ -0.46
SDF2-203ENST00000585749 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
SDF2-203ENST00000585749 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
SDF2-203ENST00000585749 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
SDF2-203ENST00000585749 NUTM1Q86Y26 1132 aa12.17□□□□□ -0.46
SDF2-203ENST00000585749 LAMB4A4D0S4 1761 aa12.17□□□□□ -0.46
SDF2-203ENST00000585749 NUP98P52948 1817 aa12.16□□□□□ -0.46
SDF2-203ENST00000585749 FAM155AB1AL88 458 aaPredicted RBP12.16□□□□□ -0.46
SDF2-203ENST00000585749 PPIP5K2O43314 1243 aa12.16□□□□□ -0.46
SDF2-203ENST00000585749 GMPSP49915 693 aaPredicted RBP12.16□□□□□ -0.46
SDF2-203ENST00000585749 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
SDF2-203ENST00000585749 HUNKP57058 714 aa12.16□□□□□ -0.46
SDF2-203ENST00000585749 CXCL9Q07325 125 aa12.16□□□□□ -0.46
SDF2-203ENST00000585749 WDR43Q15061 677 aaKnown RBP eCLIP12.16□□□□□ -0.46
SDF2-203ENST00000585749 AOC3Q16853 763 aa12.16□□□□□ -0.46
SDF2-203ENST00000585749 ZC3H15Q8WU90 426 aaKnown RBP12.16□□□□□ -0.46
SDF2-203ENST00000585749 CDHR2Q9BYE9 1310 aa12.15□□□□□ -0.46
SDF2-203ENST00000585749 PPEF1O14829 653 aaPredicted RBP12.15□□□□□ -0.46
SDF2-203ENST00000585749 SNRPA1P09661 255 aaKnown RBP12.15□□□□□ -0.46
SDF2-203ENST00000585749 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
SDF2-203ENST00000585749 CDC37L1Q7L3B6 337 aa12.15□□□□□ -0.46
SDF2-203ENST00000585749 TRPM4Q8TD43 1214 aa12.15□□□□□ -0.46
SDF2-203ENST00000585749 RPGRQ92834 1020 aaKnown RBP12.15□□□□□ -0.46
SDF2-203ENST00000585749 NYXQ9GZU5 481 aa12.15□□□□□ -0.46
SDF2-203ENST00000585749 AKAP11Q9UKA4 1901 aa12.15□□□□□ -0.46
SDF2-203ENST00000585749 TCERG1O14776 1098 aaKnown RBP12.14□□□□□ -0.47
SDF2-203ENST00000585749 PNISRQ8TF01 805 aaKnown RBP12.14□□□□□ -0.47
SDF2-203ENST00000585749 CRAMP1Q96RY5 1269 aa12.14□□□□□ -0.47
SDF2-203ENST00000585749 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
SDF2-203ENST00000585749 ZNRF3Q9ULT6 936 aa12.14□□□□□ -0.47
SDF2-203ENST00000585749 PCDHB8Q9UN66 801 aa12.14□□□□□ -0.47
SDF2-203ENST00000585749 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
SDF2-203ENST00000585749 TRPA1O75762 1119 aa12.13□□□□□ -0.47
SDF2-203ENST00000585749 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
SDF2-203ENST00000585749 LMOD3Q0VAK6 560 aa12.13□□□□□ -0.47
SDF2-203ENST00000585749 ASTLQ6HA08 431 aaPredicted RBP12.13□□□□□ -0.47
SDF2-203ENST00000585749 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
SDF2-203ENST00000585749 DLK2Q6UY11 383 aa12.13□□□□□ -0.47
SDF2-203ENST00000585749 RUNDC1Q96C34 613 aa12.13□□□□□ -0.47
SDF2-203ENST00000585749 RBM17Q96I25 401 aaKnown RBP12.13□□□□□ -0.47
SDF2-203ENST00000585749 RNF186Q9NXI6 227 aa12.13□□□□□ -0.47
SDF2-203ENST00000585749 IBTKQ9P2D0 1353 aaPredicted RBP12.13□□□□□ -0.47
SDF2-203ENST00000585749 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
SDF2-203ENST00000585749 RIPK4P57078 832 aa12.12□□□□□ -0.47
SDF2-203ENST00000585749 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
SDF2-203ENST00000585749 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
SDF2-203ENST00000585749 CTU1Q7Z7A3 348 aaKnown RBP12.12□□□□□ -0.47
SDF2-203ENST00000585749 USP48Q86UV5 1035 aa12.12□□□□□ -0.47
SDF2-203ENST00000585749 RTFDC1Q9BY42 306 aaPredicted RBP12.12□□□□□ -0.47
SDF2-203ENST00000585749 BMP2KQ9NSY1 1161 aaPredicted RBP12.12□□□□□ -0.47
SDF2-203ENST00000585749 ADAMTS8Q9UP79 889 aa12.12□□□□□ -0.47
SDF2-203ENST00000585749 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
SDF2-203ENST00000585749 CCDC146Q8IYE0 955 aa12.11□□□□□ -0.47
SDF2-203ENST00000585749 CCDC102AQ96A19 550 aa12.11□□□□□ -0.47
SDF2-203ENST00000585749 THUMPD2Q9BTF0 503 aaKnown RBP12.11□□□□□ -0.47
SDF2-203ENST00000585749 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
SDF2-203ENST00000585749 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
SDF2-203ENST00000585749 ATP6V0A2Q9Y487 856 aa12.11□□□□□ -0.47
SDF2-203ENST00000585749 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
SDF2-203ENST00000585749 RAD17O75943 681 aa12.1□□□□□ -0.47
SDF2-203ENST00000585749 TIE1P35590 1138 aa12.1□□□□□ -0.47
SDF2-203ENST00000585749 SUSD4Q5VX71 490 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms