RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
SPC24-202ENST00000585486 KLHDC4Q8TBB5 520 aa16.67■□□□□ 0.26
SPC24-202ENST00000585486 PDE4AP27815 886 aa16.66■□□□□ 0.26
SPC24-202ENST00000585486 FAM161AQ3B820 660 aa16.66■□□□□ 0.26
SPC24-202ENST00000585486 GREM2Q9H772 168 aa16.66■□□□□ 0.26
SPC24-202ENST00000585486 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
SPC24-202ENST00000585486 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.66■□□□□ 0.26
SPC24-202ENST00000585486 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
SPC24-202ENST00000585486 KLRG2A4D1S0 409 aaPredicted RBP16.65■□□□□ 0.26
SPC24-202ENST00000585486 ATG9AQ7Z3C6 839 aa16.65■□□□□ 0.26
SPC24-202ENST00000585486 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
SPC24-202ENST00000585486 SURF6O75683 361 aaKnown RBP16.64■□□□□ 0.25
SPC24-202ENST00000585486 SASH1O94885 1247 aa16.64■□□□□ 0.25
SPC24-202ENST00000585486 CHD1LQ86WJ1 897 aa16.64■□□□□ 0.25
SPC24-202ENST00000585486 CCDC24Q8N4L8 307 aa16.64■□□□□ 0.25
SPC24-202ENST00000585486 LRP5O75197 1615 aa16.63■□□□□ 0.25
SPC24-202ENST00000585486 MSH5O43196 834 aa16.63■□□□□ 0.25
SPC24-202ENST00000585486 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
SPC24-202ENST00000585486 MMP10P09238 476 aa16.63■□□□□ 0.25
SPC24-202ENST00000585486 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
SPC24-202ENST00000585486 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
SPC24-202ENST00000585486 ZNF594Q96JF6 807 aaPredicted RBP16.63■□□□□ 0.25
SPC24-202ENST00000585486 MYH3P11055 1940 aa16.62■□□□□ 0.25
SPC24-202ENST00000585486 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
SPC24-202ENST00000585486 ITGA6P23229 1130 aa16.62■□□□□ 0.25
SPC24-202ENST00000585486 CRY2Q49AN0 593 aa16.62■□□□□ 0.25
SPC24-202ENST00000585486 ANKRD45Q5TZF3 282 aa16.62■□□□□ 0.25
SPC24-202ENST00000585486 CNBD1Q8NA66 436 aa16.62■□□□□ 0.25
SPC24-202ENST00000585486 CCDC85AQ96PX6 553 aaPredicted RBP16.62■□□□□ 0.25
SPC24-202ENST00000585486 PUS3Q9BZE2 481 aaKnown RBP16.62■□□□□ 0.25
SPC24-202ENST00000585486 SEC31BQ9NQW1 1179 aa16.62■□□□□ 0.25
SPC24-202ENST00000585486 SALL3Q9BXA9 1300 aa16.62■□□□□ 0.25
SPC24-202ENST00000585486 SMARCA5O60264 1052 aaPredicted RBP16.61■□□□□ 0.25
SPC24-202ENST00000585486 CIAO1O76071 339 aa16.61■□□□□ 0.25
SPC24-202ENST00000585486 LRRC24Q50LG9 513 aa16.61■□□□□ 0.25
SPC24-202ENST00000585486 RHPN1Q8TCX5 695 aa16.61■□□□□ 0.25
SPC24-202ENST00000585486 EYA2O00167 538 aa16.6■□□□□ 0.25
SPC24-202ENST00000585486 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
SPC24-202ENST00000585486 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
SPC24-202ENST00000585486 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
SPC24-202ENST00000585486 LNPKQ9C0E8 428 aa16.6■□□□□ 0.25
SPC24-202ENST00000585486 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
SPC24-202ENST00000585486 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
SPC24-202ENST00000585486 ANKRD31Q8N7Z5 1873 aa16.6■□□□□ 0.25
SPC24-202ENST00000585486 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
SPC24-202ENST00000585486 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
SPC24-202ENST00000585486 OTUD7AQ8TE49 926 aaPredicted RBP16.59■□□□□ 0.25
SPC24-202ENST00000585486 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
SPC24-202ENST00000585486 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
SPC24-202ENST00000585486 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
SPC24-202ENST00000585486 ANKRD18BA2A2Z9 1011 aa16.58■□□□□ 0.24
SPC24-202ENST00000585486 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.24
SPC24-202ENST00000585486 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
SPC24-202ENST00000585486 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
SPC24-202ENST00000585486 KIF1BPQ96EK5 621 aa16.58■□□□□ 0.24
SPC24-202ENST00000585486 SGIP1Q9BQI5 828 aa16.58■□□□□ 0.24
SPC24-202ENST00000585486 BRIP1Q9BX63 1249 aa16.58■□□□□ 0.24
SPC24-202ENST00000585486 SIL1Q9H173 461 aa16.58■□□□□ 0.24
SPC24-202ENST00000585486 APBB1O00213 710 aa16.57■□□□□ 0.24
SPC24-202ENST00000585486 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
SPC24-202ENST00000585486 VGLL2Q8N8G2 317 aa16.57■□□□□ 0.24
SPC24-202ENST00000585486 PARP3Q9Y6F1 533 aa16.57■□□□□ 0.24
SPC24-202ENST00000585486 IL15P40933 162 aaPredicted RBP16.56■□□□□ 0.24
SPC24-202ENST00000585486 ST5P78524 1137 aa16.56■□□□□ 0.24
SPC24-202ENST00000585486 TFCP2Q12800 502 aa16.56■□□□□ 0.24
SPC24-202ENST00000585486 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
SPC24-202ENST00000585486 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
SPC24-202ENST00000585486 CELF1Q92879 486 aaKnown RBP16.56■□□□□ 0.24
SPC24-202ENST00000585486 IL1RAPL2Q9NP60 686 aa16.56■□□□□ 0.24
SPC24-202ENST00000585486 EAF2Q96CJ1 260 aaPredicted RBP16.55■□□□□ 0.24
SPC24-202ENST00000585486 GPR108Q9NPR9 543 aa16.55■□□□□ 0.24
SPC24-202ENST00000585486 C10orf71Q711Q0 1435 aa16.54■□□□□ 0.24
SPC24-202ENST00000585486 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
SPC24-202ENST00000585486 MTFR1LQ9H019 292 aa16.54■□□□□ 0.24
SPC24-202ENST00000585486 OSBPL3Q9H4L5 887 aa16.54■□□□□ 0.24
SPC24-202ENST00000585486 STAP2Q9UGK3 403 aa16.54■□□□□ 0.24
SPC24-202ENST00000585486 TAF1P21675 1872 aa16.54■□□□□ 0.24
SPC24-202ENST00000585486 ZBTB7AO95365 584 aa16.53■□□□□ 0.24
SPC24-202ENST00000585486 SRGNP10124 158 aa16.53■□□□□ 0.24
SPC24-202ENST00000585486 RPS8P62241 208 aaKnown RBP16.53■□□□□ 0.24
SPC24-202ENST00000585486 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
SPC24-202ENST00000585486 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
SPC24-202ENST00000585486 PSDA5PKW4 1024 aaPredicted RBP16.52■□□□□ 0.24
SPC24-202ENST00000585486 FGFR2P21802 821 aa16.52■□□□□ 0.24
SPC24-202ENST00000585486 PTGER2P43116 358 aa16.52■□□□□ 0.24
SPC24-202ENST00000585486 RGS3P49796 1198 aa16.52■□□□□ 0.24
SPC24-202ENST00000585486 OS9Q13438 667 aaPredicted RBP16.52■□□□□ 0.24
SPC24-202ENST00000585486 GRAPQ13588 217 aa16.52■□□□□ 0.24
SPC24-202ENST00000585486 TNNI3KQ59H18 835 aa16.52■□□□□ 0.24
SPC24-202ENST00000585486 GRAPLQ8TC17 118 aaPredicted RBP16.52■□□□□ 0.24
SPC24-202ENST00000585486 CRAMP1Q96RY5 1269 aa16.52■□□□□ 0.24
SPC24-202ENST00000585486 CDC5LQ99459 802 aaKnown RBP16.52■□□□□ 0.24
SPC24-202ENST00000585486 FPGT-TNNI3KV9GXZ4 949 aa16.52■□□□□ 0.24
SPC24-202ENST00000585486 COL11A2P13942 1736 aaPredicted RBP16.52■□□□□ 0.24
SPC24-202ENST00000585486 PDE1AP54750 535 aa16.51■□□□□ 0.23
SPC24-202ENST00000585486 ANKRD18AQ8IVF6 992 aa16.51■□□□□ 0.23
SPC24-202ENST00000585486 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
SPC24-202ENST00000585486 MINPP1Q9UNW1 487 aa16.51■□□□□ 0.23
SPC24-202ENST00000585486 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
SPC24-202ENST00000585486 PDE8BO95263 885 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms