RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 COL4A1P02462 1669 aa17.87■□□□□ 0.45
MKS1-213ENST00000585134 TAF1P21675 1872 aa17.86■□□□□ 0.45
MKS1-213ENST00000585134 HOXA10P31260 410 aaPredicted RBP17.86■□□□□ 0.45
MKS1-213ENST00000585134 RASSF7Q02833 373 aa17.86■□□□□ 0.45
MKS1-213ENST00000585134 SF3B3Q15393 1217 aaKnown RBP17.86■□□□□ 0.45
MKS1-213ENST00000585134 CCDC152Q4G0S7 254 aa17.86■□□□□ 0.45
MKS1-213ENST00000585134 OLFM4Q6UX06 510 aa17.86■□□□□ 0.45
MKS1-213ENST00000585134 ARHGAP45Q92619 1136 aa17.86■□□□□ 0.45
MKS1-213ENST00000585134 CRAMP1Q96RY5 1269 aa17.86■□□□□ 0.45
MKS1-213ENST00000585134 CHMP3Q9Y3E7 222 aa17.86■□□□□ 0.45
MKS1-213ENST00000585134 GRAPQ13588 217 aa17.85■□□□□ 0.45
MKS1-213ENST00000585134 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
MKS1-213ENST00000585134 GRAPLQ8TC17 118 aaPredicted RBP17.85■□□□□ 0.45
MKS1-213ENST00000585134 SUCLG2Q96I99 432 aa17.85■□□□□ 0.45
MKS1-213ENST00000585134 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
MKS1-213ENST00000585134 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
MKS1-213ENST00000585134 SPEF2Q9C093 1822 aa17.84■□□□□ 0.45
MKS1-213ENST00000585134 NBPF7P0C2Y1 421 aaPredicted RBP17.83■□□□□ 0.44
MKS1-213ENST00000585134 FAM161AQ3B820 660 aa17.83■□□□□ 0.44
MKS1-213ENST00000585134 CELF1Q92879 486 aaKnown RBP17.83■□□□□ 0.44
MKS1-213ENST00000585134 PLIN1O60240 522 aa17.82■□□□□ 0.44
MKS1-213ENST00000585134 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
MKS1-213ENST00000585134 DZIP1LQ8IYY4 767 aaKnown RBP17.82■□□□□ 0.44
MKS1-213ENST00000585134 TMEM57Q8N5G2 664 aa17.82■□□□□ 0.44
MKS1-213ENST00000585134 TTLL11Q8NHH1 800 aa17.82■□□□□ 0.44
MKS1-213ENST00000585134 PLA2G12BQ9BX93 195 aa17.82■□□□□ 0.44
MKS1-213ENST00000585134 GREM2Q9H772 168 aa17.82■□□□□ 0.44
MKS1-213ENST00000585134 NFKBIEO00221 500 aa17.81■□□□□ 0.44
MKS1-213ENST00000585134 SOGA3Q5TF21 947 aa17.81■□□□□ 0.44
MKS1-213ENST00000585134 C7orf43Q8WVR3 580 aa17.81■□□□□ 0.44
MKS1-213ENST00000585134 UTYO14607 1347 aa17.8■□□□□ 0.44
MKS1-213ENST00000585134 UBTFL1P0CB47 393 aaPredicted RBP17.8■□□□□ 0.44
MKS1-213ENST00000585134 RLBP1P12271 317 aa17.8■□□□□ 0.44
MKS1-213ENST00000585134 FOXO4P98177 505 aa17.8■□□□□ 0.44
MKS1-213ENST00000585134 INTS3Q68E01 1043 aaKnown RBP17.8■□□□□ 0.44
MKS1-213ENST00000585134 LMBR1LQ6UX01 489 aa17.8■□□□□ 0.44
MKS1-213ENST00000585134 MEIS3Q99687 375 aa17.8■□□□□ 0.44
MKS1-213ENST00000585134 USP44Q9H0E7 712 aa17.8■□□□□ 0.44
MKS1-213ENST00000585134 TMX4Q9H1E5 349 aaPredicted RBP17.8■□□□□ 0.44
MKS1-213ENST00000585134 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
MKS1-213ENST00000585134 LRRC37AA6NMS7 1700 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 CHD4Q14839 1912 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 ITGA6P23229 1130 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 ANKRD18AQ8IVF6 992 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 CDC5LQ99459 802 aaKnown RBP17.79■□□□□ 0.44
MKS1-213ENST00000585134 TAOK3Q9H2K8 898 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 BICC1Q9H694 974 aaKnown RBP17.79■□□□□ 0.44
MKS1-213ENST00000585134 RTL9Q8NET4 1388 aa17.79■□□□□ 0.44
MKS1-213ENST00000585134 BBOX1O75936 387 aa17.78■□□□□ 0.44
MKS1-213ENST00000585134 RNF181Q9P0P0 153 aa17.78■□□□□ 0.44
MKS1-213ENST00000585134 ATP6V0A2Q9Y487 856 aa17.78■□□□□ 0.44
MKS1-213ENST00000585134 GOLGB1Q14789 3259 aaKnown RBP17.78■□□□□ 0.44
MKS1-213ENST00000585134 ANKRD18BA2A2Z9 1011 aa17.77■□□□□ 0.44
MKS1-213ENST00000585134 CSF1RP07333 972 aa17.77■□□□□ 0.44
MKS1-213ENST00000585134 RPS8P62241 208 aaKnown RBP17.77■□□□□ 0.44
MKS1-213ENST00000585134 FKBP4Q02790 459 aaKnown RBP eCLIP17.77■□□□□ 0.44
MKS1-213ENST00000585134 TAF7LQ5H9L4 462 aa17.77■□□□□ 0.44
MKS1-213ENST00000585134 C9orf131Q5VYM1 1079 aa17.77■□□□□ 0.44
MKS1-213ENST00000585134 KAZALD1Q96I82 304 aa17.77■□□□□ 0.44
MKS1-213ENST00000585134 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
MKS1-213ENST00000585134 SNED1Q8TER0 1413 aa17.76■□□□□ 0.43
MKS1-213ENST00000585134 IGHMBP2P38935 993 aaKnown RBP17.76■□□□□ 0.43
MKS1-213ENST00000585134 IFIT5Q13325 482 aaKnown RBP17.76■□□□□ 0.43
MKS1-213ENST00000585134 CC2D2BQ6DHV5 1058 aa17.76■□□□□ 0.43
MKS1-213ENST00000585134 RTKN2Q8IZC4 609 aa17.76■□□□□ 0.43
MKS1-213ENST00000585134 ANKRD44Q8N8A2 993 aa17.76■□□□□ 0.43
MKS1-213ENST00000585134 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
MKS1-213ENST00000585134 ZNF277Q9NRM2 450 aaPredicted RBP17.76■□□□□ 0.43
MKS1-213ENST00000585134 LRRFIP2Q9Y608 721 aaKnown RBP17.76■□□□□ 0.43
MKS1-213ENST00000585134 GNAI3P08754 354 aa17.75■□□□□ 0.43
MKS1-213ENST00000585134 YY1P25490 414 aa17.75■□□□□ 0.43
MKS1-213ENST00000585134 PRELPP51888 382 aa17.75■□□□□ 0.43
MKS1-213ENST00000585134 DPP8Q6V1X1 898 aaPredicted RBP17.75■□□□□ 0.43
MKS1-213ENST00000585134 TMC4Q7Z404 712 aa17.75■□□□□ 0.43
MKS1-213ENST00000585134 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
MKS1-213ENST00000585134 MPNDQ8N594 471 aa17.75■□□□□ 0.43
MKS1-213ENST00000585134 LTBP3Q9NS15 1303 aa17.74■□□□□ 0.43
MKS1-213ENST00000585134 LMNB1P20700 586 aa17.74■□□□□ 0.43
MKS1-213ENST00000585134 CCDC57Q2TAC2 916 aa17.74■□□□□ 0.43
MKS1-213ENST00000585134 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
MKS1-213ENST00000585134 DUOX1Q9NRD9 1551 aa17.74■□□□□ 0.43
MKS1-213ENST00000585134 SBF1O95248 1867 aa17.73■□□□□ 0.43
MKS1-213ENST00000585134 CCDC88AQ3V6T2 1871 aa17.73■□□□□ 0.43
MKS1-213ENST00000585134 MS4A1P11836 297 aa17.73■□□□□ 0.43
MKS1-213ENST00000585134 GPSM2P81274 684 aa17.73■□□□□ 0.43
MKS1-213ENST00000585134 C20orf194Q5TEA3 1177 aa17.73■□□□□ 0.43
MKS1-213ENST00000585134 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
MKS1-213ENST00000585134 COG6Q9Y2V7 657 aa17.73■□□□□ 0.43
MKS1-213ENST00000585134 RABL6Q3YEC7 729 aaPredicted RBP17.72■□□□□ 0.43
MKS1-213ENST00000585134 C1orf115Q9H7X2 142 aa17.72■□□□□ 0.43
MKS1-213ENST00000585134 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
MKS1-213ENST00000585134 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
MKS1-213ENST00000585134 GPR101Q96P66 508 aaPredicted RBP17.71■□□□□ 0.43
MKS1-213ENST00000585134 PSMD1Q99460 953 aa17.71■□□□□ 0.43
MKS1-213ENST00000585134 ANKIB1Q9P2G1 1089 aa17.71■□□□□ 0.43
MKS1-213ENST00000585134 HDAC5Q9UQL6 1122 aa17.71■□□□□ 0.43
MKS1-213ENST00000585134 LTBP1Q14766 1721 aa17.7■□□□□ 0.42
MKS1-213ENST00000585134 C6orf229H3BNL8 230 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms