RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
CASC3-210ENST00000584997 CDHR2Q9BYE9 1310 aa13.64□□□□□ -0.23
CASC3-210ENST00000584997 TAF1P21675 1872 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 RAD17O75943 681 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 MAP2K2P36507 400 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 LMOD3Q0VAK6 560 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 KIAA2012Q0VF49 1180 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 TNIP1Q15025 636 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 COPS6Q7L5N1 327 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 SP8Q8IXZ3 490 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 ZNF408Q9H9D4 720 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
CASC3-210ENST00000584997 AOC2O75106 756 aa13.62□□□□□ -0.23
CASC3-210ENST00000584997 GRAPQ13588 217 aa13.62□□□□□ -0.23
CASC3-210ENST00000584997 SAPCD2Q86UD0 394 aa13.62□□□□□ -0.23
CASC3-210ENST00000584997 NLRP10Q86W26 655 aa13.62□□□□□ -0.23
CASC3-210ENST00000584997 GRAPLQ8TC17 118 aaPredicted RBP13.62□□□□□ -0.23
CASC3-210ENST00000584997 XAGE3Q8WTP9 111 aa13.62□□□□□ -0.23
CASC3-210ENST00000584997 GLIS2Q9BZE0 524 aaPredicted RBP13.62□□□□□ -0.23
CASC3-210ENST00000584997 BABAM1Q9NWV8 329 aa13.62□□□□□ -0.23
CASC3-210ENST00000584997 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
CASC3-210ENST00000584997 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
CASC3-210ENST00000584997 FAM161AQ3B820 660 aa13.61□□□□□ -0.23
CASC3-210ENST00000584997 ZC3H15Q8WU90 426 aaKnown RBP13.61□□□□□ -0.23
CASC3-210ENST00000584997 CCDC85CA6NKD9 419 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 LRRC37AA6NMS7 1700 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 CA12O43570 354 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 TMPOP42166 694 aaKnown RBP13.6□□□□□ -0.23
CASC3-210ENST00000584997 CDC37L1Q7L3B6 337 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 TMC4Q7Z404 712 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 HHIPL1Q96JK4 782 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 PGAP2Q9UHJ9 254 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 CASP8AP2Q9UKL3 1982 aa13.6□□□□□ -0.23
CASC3-210ENST00000584997 DDX60Q8IY21 1712 aaKnown RBP13.59□□□□□ -0.23
CASC3-210ENST00000584997 YDJCA8MPS7 323 aa13.59□□□□□ -0.23
CASC3-210ENST00000584997 H7C1D1 291 aa13.59□□□□□ -0.23
CASC3-210ENST00000584997 TRPM4Q8TD43 1214 aa13.59□□□□□ -0.23
CASC3-210ENST00000584997 ZNF428Q96B54 188 aa13.59□□□□□ -0.23
CASC3-210ENST00000584997 CNOT7Q9UIV1 285 aaKnown RBP13.59□□□□□ -0.23
CASC3-210ENST00000584997 DUOX1Q9NRD9 1551 aa13.58□□□□□ -0.23
CASC3-210ENST00000584997 HIRAP54198 1017 aaPredicted RBP13.58□□□□□ -0.24
CASC3-210ENST00000584997 BRPF1P55201 1214 aaPredicted RBP13.58□□□□□ -0.24
CASC3-210ENST00000584997 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
CASC3-210ENST00000584997 MICALL2Q8IY33 904 aa13.58□□□□□ -0.24
CASC3-210ENST00000584997 CHPF2Q9P2E5 772 aa13.58□□□□□ -0.24
CASC3-210ENST00000584997 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
CASC3-210ENST00000584997 SHTN1A0MZ66 631 aa13.57□□□□□ -0.24
CASC3-210ENST00000584997 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
CASC3-210ENST00000584997 WASHC4Q2M389 1173 aa13.57□□□□□ -0.24
CASC3-210ENST00000584997 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
CASC3-210ENST00000584997 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
CASC3-210ENST00000584997 POLR2AP24928 1970 aaKnown RBP13.56□□□□□ -0.24
CASC3-210ENST00000584997 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 HUNKP57058 714 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 MLLT1Q03111 559 aaPredicted RBP13.56□□□□□ -0.24
CASC3-210ENST00000584997 NOGQ13253 232 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 RALBP1Q15311 655 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 HDGFL1Q5TGJ6 251 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 CCDC146Q8IYE0 955 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 PLBD2Q8NHP8 589 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 DPF2Q92785 391 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 DBNDD1Q9H9R9 158 aa13.56□□□□□ -0.24
CASC3-210ENST00000584997 PSMD14O00487 310 aa13.55□□□□□ -0.24
CASC3-210ENST00000584997 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
CASC3-210ENST00000584997 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
CASC3-210ENST00000584997 SAMD7Q7Z3H4 446 aa13.55□□□□□ -0.24
CASC3-210ENST00000584997 CELF1Q92879 486 aaKnown RBP13.55□□□□□ -0.24
CASC3-210ENST00000584997 FAM89AQ96GI7 184 aa13.55□□□□□ -0.24
CASC3-210ENST00000584997 EYA3Q99504 573 aa13.55□□□□□ -0.24
CASC3-210ENST00000584997 MCOLN1Q9GZU1 580 aa13.55□□□□□ -0.24
CASC3-210ENST00000584997 ATP5J2-PTCD1G3V325 749 aa13.54□□□□□ -0.24
CASC3-210ENST00000584997 CHL1O00533 1208 aa13.54□□□□□ -0.24
CASC3-210ENST00000584997 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
CASC3-210ENST00000584997 SF3B3Q15393 1217 aaKnown RBP13.54□□□□□ -0.24
CASC3-210ENST00000584997 TBC1D10BQ4KMP7 808 aaPredicted RBP13.54□□□□□ -0.24
CASC3-210ENST00000584997 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
CASC3-210ENST00000584997 KRT26Q7Z3Y9 468 aa13.54□□□□□ -0.24
CASC3-210ENST00000584997 DBF4Q9UBU7 674 aaPredicted RBP13.54□□□□□ -0.24
CASC3-210ENST00000584997 ECE2O60344 883 aa13.53□□□□□ -0.24
CASC3-210ENST00000584997 HOXB7P09629 217 aa13.53□□□□□ -0.24
CASC3-210ENST00000584997 DGKZQ13574 1117 aa13.53□□□□□ -0.24
CASC3-210ENST00000584997 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
CASC3-210ENST00000584997 DCPSQ96C86 337 aaKnown RBP13.53□□□□□ -0.24
CASC3-210ENST00000584997 ISCA1Q9BUE6 129 aa13.53□□□□□ -0.24
CASC3-210ENST00000584997 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
CASC3-210ENST00000584997 G3V3G9 751 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
CASC3-210ENST00000584997 RGS19P49795 217 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 GPSM2P81274 684 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 WDR43Q15061 677 aaKnown RBP eCLIP13.52□□□□□ -0.25
CASC3-210ENST00000584997 DOK7Q18PE1 504 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 RGMBQ6NW40 437 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 DLK2Q6UY11 383 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 ZIC5Q96T25 663 aa13.52□□□□□ -0.25
CASC3-210ENST00000584997 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms