RNA–Protein interactions for RNA: ENST00000584960.1

RIOK3-210, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-210ENST00000584960 TMEM57Q8N5G2 664 aa18.6■□□□□ 0.57
RIOK3-210ENST00000584960 ARFGEF1Q9Y6D6 1849 aa18.6■□□□□ 0.57
RIOK3-210ENST00000584960 BBOX1O75936 387 aa18.59■□□□□ 0.57
RIOK3-210ENST00000584960 UBTFL1P0CB47 393 aaPredicted RBP18.59■□□□□ 0.57
RIOK3-210ENST00000584960 C3orf67Q6ZVT6 689 aa18.59■□□□□ 0.57
RIOK3-210ENST00000584960 TTLL11Q8NHH1 800 aa18.59■□□□□ 0.57
RIOK3-210ENST00000584960 RTL9Q8NET4 1388 aa18.58■□□□□ 0.57
RIOK3-210ENST00000584960 SRCAPQ6ZRS2 3230 aa18.58■□□□□ 0.57
RIOK3-210ENST00000584960 TMC4Q7Z404 712 aa18.58■□□□□ 0.56
RIOK3-210ENST00000584960 TNNQ9UQP3 1299 aa18.58■□□□□ 0.56
RIOK3-210ENST00000584960 PLIN1O60240 522 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 GRIN3BO60391 1043 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
RIOK3-210ENST00000584960 FOXO4P98177 505 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 GPR162Q16538 588 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 GRIPAP1Q4V328 841 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 SOGA3Q5TF21 947 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 ITPRIPQ8IWB1 547 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 BCS1LQ9Y276 419 aa18.57■□□□□ 0.56
RIOK3-210ENST00000584960 SLX4Q8IY92 1834 aa18.56■□□□□ 0.56
RIOK3-210ENST00000584960 RLBP1P12271 317 aa18.56■□□□□ 0.56
RIOK3-210ENST00000584960 GRAPQ13588 217 aa18.56■□□□□ 0.56
RIOK3-210ENST00000584960 MVPQ14764 893 aaKnown RBP18.56■□□□□ 0.56
RIOK3-210ENST00000584960 CC2D2BQ6DHV5 1058 aa18.56■□□□□ 0.56
RIOK3-210ENST00000584960 GRAPLQ8TC17 118 aaPredicted RBP18.56■□□□□ 0.56
RIOK3-210ENST00000584960 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
RIOK3-210ENST00000584960 CDC5LQ99459 802 aaKnown RBP18.56■□□□□ 0.56
RIOK3-210ENST00000584960 TMX4Q9H1E5 349 aaPredicted RBP18.56■□□□□ 0.56
RIOK3-210ENST00000584960 DDX19BQ9UMR2 479 aa18.56■□□□□ 0.56
RIOK3-210ENST00000584960 CACNA1SQ13698 1873 aa18.56■□□□□ 0.56
RIOK3-210ENST00000584960 ZBTB7BO15156 539 aaPredicted RBP18.55■□□□□ 0.56
RIOK3-210ENST00000584960 RABL6Q3YEC7 729 aaPredicted RBP18.55■□□□□ 0.56
RIOK3-210ENST00000584960 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
RIOK3-210ENST00000584960 SUCLG2Q96I99 432 aa18.55■□□□□ 0.56
RIOK3-210ENST00000584960 MEIS3Q99687 375 aa18.55■□□□□ 0.56
RIOK3-210ENST00000584960 RPS8P62241 208 aaKnown RBP18.54■□□□□ 0.56
RIOK3-210ENST00000584960 LMBR1LQ6UX01 489 aa18.54■□□□□ 0.56
RIOK3-210ENST00000584960 KAZALD1Q96I82 304 aa18.54■□□□□ 0.56
RIOK3-210ENST00000584960 ANKRD18BA2A2Z9 1011 aa18.53■□□□□ 0.56
RIOK3-210ENST00000584960 GNAI2P04899 355 aa18.53■□□□□ 0.56
RIOK3-210ENST00000584960 IFIT5Q13325 482 aaKnown RBP18.53■□□□□ 0.56
RIOK3-210ENST00000584960 CCDC57Q2TAC2 916 aa18.53■□□□□ 0.56
RIOK3-210ENST00000584960 SP8Q8IXZ3 490 aa18.53■□□□□ 0.56
RIOK3-210ENST00000584960 PELP1Q8IZL8 1130 aaKnown RBP18.53■□□□□ 0.56
RIOK3-210ENST00000584960 C7orf43Q8WVR3 580 aa18.53■□□□□ 0.56
RIOK3-210ENST00000584960 BICC1Q9H694 974 aaKnown RBP18.53■□□□□ 0.56
RIOK3-210ENST00000584960 GREM2Q9H772 168 aa18.53■□□□□ 0.56
RIOK3-210ENST00000584960 TAF1P21675 1872 aa18.52■□□□□ 0.56
RIOK3-210ENST00000584960 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.56
RIOK3-210ENST00000584960 YBX3P16989 372 aaKnown RBP eCLIP18.52■□□□□ 0.561e-9■□□□□ 8.7
RIOK3-210ENST00000584960 ITGA6P23229 1130 aa18.52■□□□□ 0.56
RIOK3-210ENST00000584960 EPHA10Q5JZY3 1008 aa18.52■□□□□ 0.56
RIOK3-210ENST00000584960 ANKRD18AQ8IVF6 992 aa18.52■□□□□ 0.56
RIOK3-210ENST00000584960 COG6Q9Y2V7 657 aa18.52■□□□□ 0.56
RIOK3-210ENST00000584960 ATP6V0A2Q9Y487 856 aa18.52■□□□□ 0.56
RIOK3-210ENST00000584960 RTKN2Q8IZC4 609 aa18.51■□□□□ 0.55
RIOK3-210ENST00000584960 CELF1Q92879 486 aaKnown RBP18.51■□□□□ 0.55
RIOK3-210ENST00000584960 SEC31BQ9NQW1 1179 aa18.51■□□□□ 0.55
RIOK3-210ENST00000584960 CHMP3Q9Y3E7 222 aa18.51■□□□□ 0.55
RIOK3-210ENST00000584960 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
RIOK3-210ENST00000584960 C21orf2O43822 256 aa18.5■□□□□ 0.55
RIOK3-210ENST00000584960 IGHMBP2P38935 993 aaKnown RBP18.5■□□□□ 0.55
RIOK3-210ENST00000584960 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
RIOK3-210ENST00000584960 CCDC93Q567U6 631 aa18.5■□□□□ 0.55
RIOK3-210ENST00000584960 ANKRD44Q8N8A2 993 aa18.5■□□□□ 0.55
RIOK3-210ENST00000584960 CCDC85AQ96PX6 553 aaPredicted RBP18.5■□□□□ 0.55
RIOK3-210ENST00000584960 BSDC1Q9NW68 430 aaPredicted RBP18.5■□□□□ 0.55
RIOK3-210ENST00000584960 MTX1Q13505 466 aa18.49■□□□□ 0.55
RIOK3-210ENST00000584960 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
RIOK3-210ENST00000584960 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
RIOK3-210ENST00000584960 SUPT16HQ9Y5B9 1047 aaKnown RBP18.49■□□□□ 0.55
RIOK3-210ENST00000584960 TAF7LQ5H9L4 462 aa18.48■□□□□ 0.55
RIOK3-210ENST00000584960 C20orf194Q5TEA3 1177 aa18.48■□□□□ 0.55
RIOK3-210ENST00000584960 ARHGAP27Q6ZUM4 889 aa18.48■□□□□ 0.55
RIOK3-210ENST00000584960 ZBTB40Q9NUA8 1239 aa18.48■□□□□ 0.55
RIOK3-210ENST00000584960 FER1L6Q2WGJ9 1857 aa18.48■□□□□ 0.55
RIOK3-210ENST00000584960 CENPBP07199 599 aaPredicted RBP18.47■□□□□ 0.55
RIOK3-210ENST00000584960 FBXO3Q9UK99 471 aa18.47■□□□□ 0.55
RIOK3-210ENST00000584960 LTBP3Q9NS15 1303 aa18.47■□□□□ 0.55
RIOK3-210ENST00000584960 AAMPQ13685 434 aa18.46■□□□□ 0.55
RIOK3-210ENST00000584960 VPS33BQ9H267 617 aa18.46■□□□□ 0.55
RIOK3-210ENST00000584960 ZNF219Q9P2Y4 722 aaPredicted RBP18.46■□□□□ 0.55
RIOK3-210ENST00000584960 LRRC37AA6NMS7 1700 aa18.46■□□□□ 0.55
RIOK3-210ENST00000584960 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
RIOK3-210ENST00000584960 LDHAL6AQ6ZMR3 332 aa18.45■□□□□ 0.54
RIOK3-210ENST00000584960 MPNDQ8N594 471 aa18.45■□□□□ 0.54
RIOK3-210ENST00000584960 SUPT20HQ8NEM7 779 aa18.45■□□□□ 0.54
RIOK3-210ENST00000584960 PSMD1Q99460 953 aa18.45■□□□□ 0.54
RIOK3-210ENST00000584960 CHD4Q14839 1912 aa18.45■□□□□ 0.54
RIOK3-210ENST00000584960 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
RIOK3-210ENST00000584960 ANKRD2Q9GZV1 360 aa18.44■□□□□ 0.54
RIOK3-210ENST00000584960 PODXL2Q9NZ53 605 aa18.44■□□□□ 0.54
RIOK3-210ENST00000584960 SPEF2Q9C093 1822 aa18.44■□□□□ 0.54
RIOK3-210ENST00000584960 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
RIOK3-210ENST00000584960 RFX5P48382 616 aaPredicted RBP18.43■□□□□ 0.54
RIOK3-210ENST00000584960 FKBP4Q02790 459 aaKnown RBP eCLIP18.43■□□□□ 0.54
RIOK3-210ENST00000584960 DPP8Q6V1X1 898 aaPredicted RBP18.43■□□□□ 0.54
RIOK3-210ENST00000584960 TAOK3Q9H2K8 898 aa18.43■□□□□ 0.54
RIOK3-210ENST00000584960 COPRSQ9NQ92 184 aa18.43■□□□□ 0.54
RIOK3-210ENST00000584960 CNNM1Q9NRU3 951 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 287.7 ms