RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
UBBP4-202ENST00000584755 LRP5O75197 1615 aa17.21■□□□□ 0.35
UBBP4-202ENST00000584755 EYA2O00167 538 aa17.21■□□□□ 0.35
UBBP4-202ENST00000584755 CCDC57Q2TAC2 916 aa17.21■□□□□ 0.35
UBBP4-202ENST00000584755 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
UBBP4-202ENST00000584755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.21■□□□□ 0.35
UBBP4-202ENST00000584755 PHF14O94880 888 aa17.2■□□□□ 0.34
UBBP4-202ENST00000584755 IL15P40933 162 aaPredicted RBP17.2■□□□□ 0.34
UBBP4-202ENST00000584755 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
UBBP4-202ENST00000584755 SLC10A5Q5PT55 438 aa17.2■□□□□ 0.34
UBBP4-202ENST00000584755 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
UBBP4-202ENST00000584755 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
UBBP4-202ENST00000584755 EAF2Q96CJ1 260 aaPredicted RBP17.19■□□□□ 0.34
UBBP4-202ENST00000584755 SETDB2Q96T68 719 aa17.19■□□□□ 0.34
UBBP4-202ENST00000584755 NYXQ9GZU5 481 aa17.19■□□□□ 0.34
UBBP4-202ENST00000584755 GREM2Q9H772 168 aa17.19■□□□□ 0.34
UBBP4-202ENST00000584755 GPR108Q9NPR9 543 aa17.19■□□□□ 0.34
UBBP4-202ENST00000584755 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
UBBP4-202ENST00000584755 ITGA6P23229 1130 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
UBBP4-202ENST00000584755 ANKRD18BA2A2Z9 1011 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 FAM177BA6PVY3 158 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 GYS1P13807 737 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 TFCP2Q12800 502 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 AACSQ86V21 672 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
UBBP4-202ENST00000584755 CARMIL3Q8ND23 1372 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 SDSP20132 328 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 ERFEQ4G0M1 354 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 LRRC24Q50LG9 513 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 TNNI3KQ59H18 835 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 BICDL1Q6ZP65 573 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 FPGT-TNNI3KV9GXZ4 949 aa17.17■□□□□ 0.34
UBBP4-202ENST00000584755 IFIT2P09913 472 aaKnown RBP17.16■□□□□ 0.34
UBBP4-202ENST00000584755 NFIXQ14938 502 aa17.16■□□□□ 0.34
UBBP4-202ENST00000584755 SF3B3Q15393 1217 aaKnown RBP17.16■□□□□ 0.34
UBBP4-202ENST00000584755 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
UBBP4-202ENST00000584755 TSHZ3Q63HK5 1081 aa17.16■□□□□ 0.34
UBBP4-202ENST00000584755 CCDC85AQ96PX6 553 aaPredicted RBP17.16■□□□□ 0.34
UBBP4-202ENST00000584755 PUS3Q9BZE2 481 aaKnown RBP17.16■□□□□ 0.34
UBBP4-202ENST00000584755 ECHDC1Q9NTX5 307 aa17.16■□□□□ 0.34
UBBP4-202ENST00000584755 RIPOR2Q9Y4F9 1068 aa17.16■□□□□ 0.34
UBBP4-202ENST00000584755 CASZ1Q86V15 1759 aa17.16■□□□□ 0.34
UBBP4-202ENST00000584755 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
UBBP4-202ENST00000584755 SEC24BO95487 1268 aa17.15■□□□□ 0.34
UBBP4-202ENST00000584755 TPTE2Q6XPS3 522 aa17.15■□□□□ 0.34
UBBP4-202ENST00000584755 NBPF5PQ86XG9 351 aaPredicted RBP17.15■□□□□ 0.34
UBBP4-202ENST00000584755 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
UBBP4-202ENST00000584755 RIC1Q4ADV7 1423 aa17.15■□□□□ 0.34
UBBP4-202ENST00000584755 CDC45O75419 566 aa17.14■□□□□ 0.33
UBBP4-202ENST00000584755 GLRX3O76003 335 aaKnown RBP17.14■□□□□ 0.33
UBBP4-202ENST00000584755 TM4SF1P30408 202 aa17.14■□□□□ 0.33
UBBP4-202ENST00000584755 TAF7LQ5H9L4 462 aa17.14■□□□□ 0.33
UBBP4-202ENST00000584755 GPATCH3Q96I76 525 aa17.14■□□□□ 0.33
UBBP4-202ENST00000584755 ZNF609O15014 1411 aa17.14■□□□□ 0.33
UBBP4-202ENST00000584755 ERC2O15083 957 aa17.13■□□□□ 0.33
UBBP4-202ENST00000584755 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
UBBP4-202ENST00000584755 CCDC8Q9H0W5 538 aaPredicted RBP17.13■□□□□ 0.33
UBBP4-202ENST00000584755 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
UBBP4-202ENST00000584755 LDHAL6AQ6ZMR3 332 aa17.12■□□□□ 0.33
UBBP4-202ENST00000584755 TLR7Q9NYK1 1049 aaKnown RBP17.12■□□□□ 0.33
UBBP4-202ENST00000584755 DBNLQ9UJU6 430 aaKnown RBP17.12■□□□□ 0.33
UBBP4-202ENST00000584755 QSER1Q2KHR3 1735 aa17.12■□□□□ 0.33
UBBP4-202ENST00000584755 C3orf67Q6ZVT6 689 aa17.12■□□□□ 0.33
UBBP4-202ENST00000584755 COL23A1Q86Y22 540 aaPredicted RBP17.12■□□□□ 0.33
UBBP4-202ENST00000584755 VGLL2Q8N8G2 317 aa17.12■□□□□ 0.33
UBBP4-202ENST00000584755 CEP126Q9P2H0 1117 aa17.12■□□□□ 0.33
UBBP4-202ENST00000584755 GTF2E1P29083 439 aaPredicted RBP17.11■□□□□ 0.33
UBBP4-202ENST00000584755 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
UBBP4-202ENST00000584755 EZH2Q15910 746 aaKnown RBP17.11■□□□□ 0.33
UBBP4-202ENST00000584755 SEC31BQ9NQW1 1179 aa17.11■□□□□ 0.33
UBBP4-202ENST00000584755 PNPLA7Q6ZV29 1317 aa17.1■□□□□ 0.33
UBBP4-202ENST00000584755 CNNM1Q9NRU3 951 aa17.1■□□□□ 0.33
UBBP4-202ENST00000584755 AKAP2Q9Y2D5 859 aa17.1■□□□□ 0.33
UBBP4-202ENST00000584755 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
UBBP4-202ENST00000584755 MROH5Q6ZUA9 1318 aa17.09■□□□□ 0.33
UBBP4-202ENST00000584755 EIF5BO60841 1220 aaKnown RBP17.09■□□□□ 0.33
UBBP4-202ENST00000584755 ATP5JP18859 108 aa17.09■□□□□ 0.33
UBBP4-202ENST00000584755 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
UBBP4-202ENST00000584755 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
UBBP4-202ENST00000584755 NLRP3Q96P20 1036 aa17.09■□□□□ 0.33
UBBP4-202ENST00000584755 CDC5LQ99459 802 aaKnown RBP17.09■□□□□ 0.33
UBBP4-202ENST00000584755 DBNDD2Q9BQY9 259 aa17.09■□□□□ 0.33
UBBP4-202ENST00000584755 COL4A1P02462 1669 aa17.09■□□□□ 0.33
UBBP4-202ENST00000584755 NRXN2Q9P2S2 1712 aa17.08■□□□□ 0.33
UBBP4-202ENST00000584755 A0A1B0GUL7 405 aa17.08■□□□□ 0.32
UBBP4-202ENST00000584755 BAG6P46379 1132 aa17.08■□□□□ 0.32
UBBP4-202ENST00000584755 DDR1Q08345 913 aa17.08■□□□□ 0.32
UBBP4-202ENST00000584755 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
UBBP4-202ENST00000584755 NLGN1Q8N2Q7 840 aa17.08■□□□□ 0.32
UBBP4-202ENST00000584755 ANO8Q9HCE9 1232 aaPredicted RBP17.08■□□□□ 0.32
UBBP4-202ENST00000584755 AK9Q5TCS8 1911 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 POLRMTO00411 1230 aaKnown RBP17.07■□□□□ 0.32
UBBP4-202ENST00000584755 PDE8BO95263 885 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 SERPINB2P05120 415 aa17.07■□□□□ 0.32
UBBP4-202ENST00000584755 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms