RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 PIP4K2AP48426 406 aaPredicted RBP8.35□□□□□ -1.07
CDH8-212ENST00000584506 ANKRD44Q8N8A2 993 aa8.35□□□□□ -1.07
CDH8-212ENST00000584506 DDX27Q96GQ7 796 aaKnown RBP8.35□□□□□ -1.07
CDH8-212ENST00000584506 USP44Q9H0E7 712 aa8.35□□□□□ -1.07
CDH8-212ENST00000584506 C1orf115Q9H7X2 142 aa8.35□□□□□ -1.07
CDH8-212ENST00000584506 CCDC87Q9NVE4 849 aa8.35□□□□□ -1.07
CDH8-212ENST00000584506 TAF1LQ8IZX4 1826 aa8.35□□□□□ -1.07
CDH8-212ENST00000584506 ANKRD36CQ5JPF3 1778 aa8.35□□□□□ -1.07
CDH8-212ENST00000584506 MYH14Q7Z406 1995 aaKnown RBP8.34□□□□□ -1.07
CDH8-212ENST00000584506 PTGER2P43116 358 aa8.34□□□□□ -1.07
CDH8-212ENST00000584506 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
CDH8-212ENST00000584506 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
CDH8-212ENST00000584506 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
CDH8-212ENST00000584506 MYD88Q99836 296 aa8.34□□□□□ -1.07
CDH8-212ENST00000584506 ZNF330Q9Y3S2 320 aaPredicted RBP8.34□□□□□ -1.07
CDH8-212ENST00000584506 A0A087WZG4 1122 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 NEURL1BA8MQ27 555 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 GRM8O00222 908 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 HSP90AB3PQ58FF7 597 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 FAM182BQ5T319 152 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 CEP85Q6P2H3 762 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 TTLL7Q6ZT98 887 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 ARXQ96QS3 562 aa8.33□□□□□ -1.08
CDH8-212ENST00000584506 UTYO14607 1347 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 MAP3K15Q6ZN16 1313 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 ERVV-1B6SEH8 477 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 NBPF7P0C2Y1 421 aaPredicted RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 PBX2P40425 430 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 CRKLP46109 303 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 EIF5P55010 431 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 TRIM28Q13263 835 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 TCIRG1Q13488 830 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 ITPK1Q13572 414 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 GCKRQ14397 625 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 CWF19L2Q2TBE0 894 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 INTS5Q6P9B9 1019 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 GIGYF2Q6Y7W6 1299 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 CCDC191Q8NCU4 936 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 OXER1Q8TDS5 423 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 ZBTB3Q9H5J0 574 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 DCTPP1Q9H773 170 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 CWC25Q9NXE8 425 aaPredicted RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 ZBTB1Q9Y2K1 713 aa8.32□□□□□ -1.08
CDH8-212ENST00000584506 LRRFIP2Q9Y608 721 aaKnown RBP8.32□□□□□ -1.08
CDH8-212ENST00000584506 CNTNAP4Q9C0A0 1308 aa8.31□□□□□ -1.08
CDH8-212ENST00000584506 PSDA5PKW4 1024 aaPredicted RBP8.31□□□□□ -1.08
CDH8-212ENST00000584506 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
CDH8-212ENST00000584506 SIRT2Q8IXJ6 389 aa8.31□□□□□ -1.08
CDH8-212ENST00000584506 UPF1Q92900 1129 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH8-212ENST00000584506 CCNL1Q9UK58 526 aaPredicted RBP8.31□□□□□ -1.08
CDH8-212ENST00000584506 LHX6Q9UPM6 363 aa8.31□□□□□ -1.08
CDH8-212ENST00000584506 PDZRN3Q9UPQ7 1066 aa8.31□□□□□ -1.08
CDH8-212ENST00000584506 ATP5J2-PTCD1G3V325 749 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 TBC1D12O60347 775 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 NUCB1Q02818 461 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 HSP90AB4PQ58FF6 505 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 SLC27A3Q5K4L6 730 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 ANKRD45Q5TZF3 282 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 SSH3Q8TE77 659 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 RNF166Q96A37 237 aaPredicted RBP8.3□□□□□ -1.08
CDH8-212ENST00000584506 ISCA1Q9BUE6 129 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 MYH3P11055 1940 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 COL15A1P39059 1388 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 BCORQ6W2J9 1755 aa8.3□□□□□ -1.08
CDH8-212ENST00000584506 H7C1W4 665 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 SRGAP3O43295 1099 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 RPS6KA4O75676 772 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 TRIM37O94972 964 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 RGS3P49796 1198 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 LSM11P83369 360 aaKnown RBP eCLIP8.29□□□□□ -1.08
CDH8-212ENST00000584506 MTX1Q13505 466 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 PTF1AQ7RTS3 328 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 PPP1R42Q7Z4L9 355 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 CHD1LQ86WJ1 897 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 LINC00116Q8NCU8 138 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 EMILIN3Q9NT22 766 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 TBC1D2BQ9UPU7 963 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 C4BP0C0L5 1744 aa8.29□□□□□ -1.08
CDH8-212ENST00000584506 PNMA6EA0A0J9YXQ4 647 aa8.28□□□□□ -1.08
CDH8-212ENST00000584506 RAB11FIP3O75154 756 aa8.28□□□□□ -1.08
CDH8-212ENST00000584506 HSP90B1P14625 803 aaKnown RBP8.28□□□□□ -1.08
CDH8-212ENST00000584506 PARP10Q53GL7 1025 aa8.28□□□□□ -1.08
CDH8-212ENST00000584506 POTEAQ6S8J7 498 aa8.28□□□□□ -1.08
CDH8-212ENST00000584506 CLEC4GQ6UXB4 293 aa8.28□□□□□ -1.08
CDH8-212ENST00000584506 UBE3BQ7Z3V4 1068 aa8.28□□□□□ -1.08
CDH8-212ENST00000584506 RGS17Q9UGC6 210 aaPredicted RBP8.28□□□□□ -1.08
CDH8-212ENST00000584506 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
CDH8-212ENST00000584506 PLSCR1O15162 318 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 SURF6O75683 361 aaKnown RBP8.27□□□□□ -1.09
CDH8-212ENST00000584506 PCCAP05165 728 aaPredicted RBP8.27□□□□□ -1.09
CDH8-212ENST00000584506 HLFQ16534 295 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 NLRP10Q86W26 655 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 ERC1Q8IUD2 1116 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 ZBTB38Q8NAP3 1195 aaPredicted RBP8.27□□□□□ -1.09
CDH8-212ENST00000584506 SUCLG2Q96I99 432 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 AK7Q96M32 723 aa8.27□□□□□ -1.09
CDH8-212ENST00000584506 LNPKQ9C0E8 428 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms