RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 PAX4O43316 350 aa7.99□□□□□ -1.13
TTC39C-210ENST00000584424 DEAF1O75398 565 aaPredicted RBP7.99□□□□□ -1.13
TTC39C-210ENST00000584424 SASH3O75995 380 aa7.99□□□□□ -1.13
TTC39C-210ENST00000584424 RARAP10276 462 aa7.99□□□□□ -1.13
TTC39C-210ENST00000584424 FSTP19883 344 aa7.99□□□□□ -1.13
TTC39C-210ENST00000584424 GRNP28799 593 aaKnown RBP7.99□□□□□ -1.13
TTC39C-210ENST00000584424 IDH3AP50213 366 aa7.99□□□□□ -1.13
TTC39C-210ENST00000584424 AKTIPQ9H8T0 292 aa7.99□□□□□ -1.13
TTC39C-210ENST00000584424 KLK14Q9P0G3 267 aa7.99□□□□□ -1.13
TTC39C-210ENST00000584424 DMGDHQ9UI17 866 aaKnown RBP7.99□□□□□ -1.13
TTC39C-210ENST00000584424 DKK1O94907 266 aa7.98□□□□□ -1.13
TTC39C-210ENST00000584424 MAP3K6O95382 1288 aa7.98□□□□□ -1.13
TTC39C-210ENST00000584424 EIF2AK2P19525 551 aaKnown RBP7.98□□□□□ -1.13
TTC39C-210ENST00000584424 SEC13P55735 322 aa7.98□□□□□ -1.13
TTC39C-210ENST00000584424 TRPM4Q8TD43 1214 aa7.98□□□□□ -1.13
TTC39C-210ENST00000584424 IFT43Q96FT9 208 aa7.98□□□□□ -1.13
TTC39C-210ENST00000584424 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
TTC39C-210ENST00000584424 INPP5BP32019 993 aa7.96□□□□□ -1.14
TTC39C-210ENST00000584424 GPLD1P80108 840 aa7.96□□□□□ -1.14
TTC39C-210ENST00000584424 GDF6Q6KF10 455 aaPredicted RBP7.96□□□□□ -1.14
TTC39C-210ENST00000584424 COL17A1Q9UMD9 1497 aaPredicted RBP7.95□□□□□ -1.14
TTC39C-210ENST00000584424 DLL1O00548 723 aa7.95□□□□□ -1.14
TTC39C-210ENST00000584424 IRAK1P51617 712 aa7.95□□□□□ -1.14
TTC39C-210ENST00000584424 ARSDP51689 593 aa7.95□□□□□ -1.14
TTC39C-210ENST00000584424 DGKZQ13574 1117 aa7.95□□□□□ -1.14
TTC39C-210ENST00000584424 DZIP1LQ8IYY4 767 aaKnown RBP7.95□□□□□ -1.14
TTC39C-210ENST00000584424 TTC9Q92623 222 aa7.95□□□□□ -1.14
TTC39C-210ENST00000584424 USP20Q9Y2K6 914 aa7.95□□□□□ -1.14
TTC39C-210ENST00000584424 J3QW42 95 aa7.94□□□□□ -1.14
TTC39C-210ENST00000584424 PTCD1O75127 700 aaKnown RBP7.94□□□□□ -1.14
TTC39C-210ENST00000584424 ARID4AP29374 1257 aaPredicted RBP7.94□□□□□ -1.14
TTC39C-210ENST00000584424 MRPL18Q9H0U6 180 aaKnown RBP7.94□□□□□ -1.14
TTC39C-210ENST00000584424 COBLO75128 1261 aa7.93□□□□□ -1.14
TTC39C-210ENST00000584424 GLB1P16278 677 aa7.93□□□□□ -1.14
TTC39C-210ENST00000584424 UBTFP17480 764 aaKnown RBP7.93□□□□□ -1.14
TTC39C-210ENST00000584424 TXKP42681 527 aa7.93□□□□□ -1.14
TTC39C-210ENST00000584424 AGGF1Q8N302 714 aaeCLIP7.93□□□□□ -1.14
TTC39C-210ENST00000584424 PLD4Q96BZ4 506 aa7.93□□□□□ -1.14
TTC39C-210ENST00000584424 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
TTC39C-210ENST00000584424 F8W735 103 aaPredicted RBP7.92□□□□□ -1.14
TTC39C-210ENST00000584424 MICAL2O94851 1124 aa7.92□□□□□ -1.14
TTC39C-210ENST00000584424 CD97P48960 835 aa7.92□□□□□ -1.14
TTC39C-210ENST00000584424 LARP1Q6PKG0 1096 aaKnown RBP7.92□□□□□ -1.14
TTC39C-210ENST00000584424 SLC51AQ86UW1 340 aa7.92□□□□□ -1.14
TTC39C-210ENST00000584424 IL22RA1Q8N6P7 574 aa7.92□□□□□ -1.14
TTC39C-210ENST00000584424 NRLP54845 237 aa7.91□□□□□ -1.14
TTC39C-210ENST00000584424 TMEM130Q8N3G9 435 aa7.91□□□□□ -1.14
TTC39C-210ENST00000584424 TFIP11Q9UBB9 837 aaKnown RBP7.91□□□□□ -1.14
TTC39C-210ENST00000584424 TGFB1P01137 390 aa7.9□□□□□ -1.14
TTC39C-210ENST00000584424 GHRHP01286 108 aa7.9□□□□□ -1.14
TTC39C-210ENST00000584424 IGFBP4P22692 258 aa7.9□□□□□ -1.14
TTC39C-210ENST00000584424 DPYDQ12882 1025 aa7.9□□□□□ -1.14
TTC39C-210ENST00000584424 CMTR1Q8N1G2 835 aaKnown RBP7.9□□□□□ -1.14
TTC39C-210ENST00000584424 NSUN5Q96P11 429 aaKnown RBP7.9□□□□□ -1.14
TTC39C-210ENST00000584424 TLR7Q9NYK1 1049 aaKnown RBP7.9□□□□□ -1.14
TTC39C-210ENST00000584424 RAXQ9Y2V3 346 aa7.9□□□□□ -1.14
TTC39C-210ENST00000584424 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
TTC39C-210ENST00000584424 MED26O95402 600 aa7.89□□□□□ -1.15
TTC39C-210ENST00000584424 TAL1P17542 331 aaPredicted RBP7.89□□□□□ -1.15
TTC39C-210ENST00000584424 SIK1P57059 783 aa7.89□□□□□ -1.15
TTC39C-210ENST00000584424 VTI1AQ96AJ9 217 aa7.89□□□□□ -1.15
TTC39C-210ENST00000584424 STOML1Q9UBI4 398 aa7.89□□□□□ -1.15
TTC39C-210ENST00000584424 RTCBQ9Y3I0 505 aaKnown RBP7.89□□□□□ -1.15
TTC39C-210ENST00000584424 OAS3Q9Y6K5 1087 aaKnown RBP7.89□□□□□ -1.15
TTC39C-210ENST00000584424 XYLBO75191 536 aa7.88□□□□□ -1.15
TTC39C-210ENST00000584424 IGLV1-40P01703 118 aa7.88□□□□□ -1.15
TTC39C-210ENST00000584424 PSAPP07602 524 aa7.88□□□□□ -1.15
TTC39C-210ENST00000584424 SETDB1Q15047 1291 aa7.88□□□□□ -1.15
TTC39C-210ENST00000584424 C11orf91Q3C1V1 193 aa7.88□□□□□ -1.15
TTC39C-210ENST00000584424 CRTC2Q53ET0 693 aaPredicted RBP7.88□□□□□ -1.15
TTC39C-210ENST00000584424 RGL4Q8IZJ4 473 aa7.88□□□□□ -1.15
TTC39C-210ENST00000584424 RBSNQ9H1K0 784 aa7.88□□□□□ -1.15
TTC39C-210ENST00000584424 QTRT2Q9H974 415 aaKnown RBP7.88□□□□□ -1.15
TTC39C-210ENST00000584424 YBX3P16989 372 aaKnown RBP eCLIP7.87□□□□□ -1.15
TTC39C-210ENST00000584424 GP2P55259 537 aaKnown RBP7.87□□□□□ -1.15
TTC39C-210ENST00000584424 C11orf16Q9NQ32 467 aa7.87□□□□□ -1.15
TTC39C-210ENST00000584424 MAFBQ9Y5Q3 323 aaPredicted RBP7.87□□□□□ -1.15
TTC39C-210ENST00000584424 OPLAHO14841 1288 aa7.86□□□□□ -1.15
TTC39C-210ENST00000584424 GSC2O15499 205 aa7.86□□□□□ -1.15
TTC39C-210ENST00000584424 PTK7Q13308 1070 aa7.86□□□□□ -1.15
TTC39C-210ENST00000584424 TRIM33Q9UPN9 1127 aa7.86□□□□□ -1.15
TTC39C-210ENST00000584424 RNF114Q9Y508 228 aa7.86□□□□□ -1.15
TTC39C-210ENST00000584424 MMP20O60882 483 aa7.85□□□□□ -1.15
TTC39C-210ENST00000584424 DCAF11Q8TEB1 546 aa7.85□□□□□ -1.15
TTC39C-210ENST00000584424 FMNL2Q96PY5 1086 aa7.85□□□□□ -1.15
TTC39C-210ENST00000584424 UBL7Q96S82 380 aaPredicted RBP7.85□□□□□ -1.15
TTC39C-210ENST00000584424 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
TTC39C-210ENST00000584424 DHX15O43143 795 aaKnown RBP7.84□□□□□ -1.15
TTC39C-210ENST00000584424 SLC24A1O60721 1099 aa7.84□□□□□ -1.15
TTC39C-210ENST00000584424 Q6ZS46 218 aa7.84□□□□□ -1.15
TTC39C-210ENST00000584424 ANKMY2Q8IV38 441 aa7.84□□□□□ -1.15
TTC39C-210ENST00000584424 MAP4K3Q8IVH8 894 aa7.84□□□□□ -1.15
TTC39C-210ENST00000584424 GLMNQ92990 594 aa7.84□□□□□ -1.15
TTC39C-210ENST00000584424 KIAA1324LA8MWY0 1029 aaPredicted RBP7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L15C9J2P7 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L10C9JJH3 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L13C9JLJ4 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L12C9JPN9 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L11C9JVI0 530 aa7.83□□□□□ -1.16
TTC39C-210ENST00000584424 USP17L21D6R901 530 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms