RNA–Protein interactions for RNA: ENST00000584192.5

NARF-223, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-223	ENST00000584192	CHD4	Q14839	1912 aa		18.34	■□□□□ 0.53
NARF-223	ENST00000584192	CTSW	P56202	376 aa		18.34	■□□□□ 0.53
NARF-223	ENST00000584192	FTSJ3	Q8IY81	847 aa	Known RBP	18.34	■□□□□ 0.53
NARF-223	ENST00000584192	TAF1	P21675	1872 aa		18.33	■□□□□ 0.53
NARF-223	ENST00000584192	SOGA3	Q5TF21	947 aa		18.33	■□□□□ 0.52
NARF-223	ENST00000584192	SUPT16H	Q9Y5B9	1047 aa	Known RBP	18.33	■□□□□ 0.52
NARF-223	ENST00000584192	UTY	O14607	1347 aa		18.32	■□□□□ 0.52
NARF-223	ENST00000584192	C21orf2	O43822	256 aa		18.32	■□□□□ 0.52
NARF-223	ENST00000584192	GRAP	Q13588	217 aa		18.32	■□□□□ 0.52
NARF-223	ENST00000584192	INTS3	Q68E01	1043 aa	Known RBP	18.32	■□□□□ 0.52
NARF-223	ENST00000584192	GRAPL	Q8TC17	118 aa	Predicted RBP	18.32	■□□□□ 0.52
NARF-223	ENST00000584192	CLUAP1	Q96AJ1	413 aa		18.32	■□□□□ 0.52
NARF-223	ENST00000584192	ZNF219	Q9P2Y4	722 aa	Predicted RBP	18.32	■□□□□ 0.52
NARF-223	ENST00000584192	PPEF1	O14829	653 aa	Predicted RBP	18.31	■□□□□ 0.52
NARF-223	ENST00000584192	BBOX1	O75936	387 aa		18.31	■□□□□ 0.52
NARF-223	ENST00000584192	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.31	■□□□□ 0.52
NARF-223	ENST00000584192	MS4A1	P11836	297 aa		18.31	■□□□□ 0.52
NARF-223	ENST00000584192	ARHGAP27	Q6ZUM4	889 aa		18.31	■□□□□ 0.52
NARF-223	ENST00000584192	DZIP1L	Q8IYY4	767 aa	Known RBP	18.31	■□□□□ 0.52
NARF-223	ENST00000584192	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.31	■□□□□ 0.52
NARF-223	ENST00000584192	TTLL11	Q8NHH1	800 aa		18.31	■□□□□ 0.52
NARF-223	ENST00000584192	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.31	■□□□□ 0.52
NARF-223	ENST00000584192	USP44	Q9H0E7	712 aa		18.31	■□□□□ 0.52
NARF-223	ENST00000584192	TMX4	Q9H1E5	349 aa	Predicted RBP	18.31	■□□□□ 0.52
NARF-223	ENST00000584192	TNN	Q9UQP3	1299 aa		18.3	■□□□□ 0.52
NARF-223	ENST00000584192	FER1L6	Q2WGJ9	1857 aa		18.29	■□□□□ 0.52
NARF-223	ENST00000584192	CCDC93	Q567U6	631 aa		18.29	■□□□□ 0.52
NARF-223	ENST00000584192	CC2D2B	Q6DHV5	1058 aa		18.29	■□□□□ 0.52
NARF-223	ENST00000584192	TMC4	Q7Z404	712 aa		18.29	■□□□□ 0.52
NARF-223	ENST00000584192	C7orf43	Q8WVR3	580 aa		18.29	■□□□□ 0.52
NARF-223	ENST00000584192	HDAC5	Q9UQL6	1122 aa		18.29	■□□□□ 0.52
NARF-223	ENST00000584192	RTL9	Q8NET4	1388 aa		18.29	■□□□□ 0.52
NARF-223	ENST00000584192	CSF1R	P07333	972 aa		18.28	■□□□□ 0.52
NARF-223	ENST00000584192	UBTFL1	P0CB47	393 aa	Predicted RBP	18.28	■□□□□ 0.52
NARF-223	ENST00000584192	RRP1	P56182	461 aa	Known RBP	18.28	■□□□□ 0.52
NARF-223	ENST00000584192	TMEM57	Q8N5G2	664 aa		18.28	■□□□□ 0.52
NARF-223	ENST00000584192	CELF1	Q92879	486 aa	Known RBP	18.28	■□□□□ 0.52
NARF-223	ENST00000584192	SUCLG2	Q96I99	432 aa		18.28	■□□□□ 0.52
NARF-223	ENST00000584192	CDC5L	Q99459	802 aa	Known RBP	18.28	■□□□□ 0.52
NARF-223	ENST00000584192	GREM2	Q9H772	168 aa		18.28	■□□□□ 0.52
NARF-223	ENST00000584192	SEC31B	Q9NQW1	1179 aa		18.28	■□□□□ 0.52
NARF-223	ENST00000584192	CHMP3	Q9Y3E7	222 aa		18.28	■□□□□ 0.52
NARF-223	ENST00000584192	RPS8	P62241	208 aa	Known RBP	18.27	■□□□□ 0.52
NARF-223	ENST00000584192	FOXO4	P98177	505 aa		18.27	■□□□□ 0.52
NARF-223	ENST00000584192	FAM161A	Q3B820	660 aa		18.27	■□□□□ 0.52
NARF-223	ENST00000584192	GRIPAP1	Q4V328	841 aa		18.27	■□□□□ 0.52
NARF-223	ENST00000584192	ATP6V0A2	Q9Y487	856 aa		18.27	■□□□□ 0.52
NARF-223	ENST00000584192	SPEF2	Q9C093	1822 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	PLIN1	O60240	522 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	GNAI3	P08754	354 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	EPHA10	Q5JZY3	1008 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	LMBR1L	Q6UX01	489 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	ANKRD18A	Q8IVF6	992 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	ITPRIP	Q8IWB1	547 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	RTKN2	Q8IZC4	609 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	SBF1	O95248	1867 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	CCDC88A	Q3V6T2	1871 aa		18.26	■□□□□ 0.51
NARF-223	ENST00000584192	ANKRD18B	A2A2Z9	1011 aa		18.25	■□□□□ 0.51
NARF-223	ENST00000584192	ITGA6	P23229	1130 aa		18.25	■□□□□ 0.51
NARF-223	ENST00000584192	IFIT5	Q13325	482 aa	Known RBP	18.25	■□□□□ 0.51
NARF-223	ENST00000584192	SP8	Q8IXZ3	490 aa		18.25	■□□□□ 0.51
NARF-223	ENST00000584192	MEIS3	Q99687	375 aa		18.25	■□□□□ 0.51
NARF-223	ENST00000584192	TAOK3	Q9H2K8	898 aa		18.25	■□□□□ 0.51
NARF-223	ENST00000584192	BICC1	Q9H694	974 aa	Known RBP	18.25	■□□□□ 0.51
NARF-223	ENST00000584192	RLBP1	P12271	317 aa		18.24	■□□□□ 0.51
NARF-223	ENST00000584192	IGHMBP2	P38935	993 aa	Known RBP	18.24	■□□□□ 0.51
NARF-223	ENST00000584192	CCDC57	Q2TAC2	916 aa		18.24	■□□□□ 0.51
NARF-223	ENST00000584192	OLFM4	Q6UX06	510 aa		18.24	■□□□□ 0.51
NARF-223	ENST00000584192	PANK1	Q8TE04	598 aa		18.24	■□□□□ 0.51
NARF-223	ENST00000584192	KAZALD1	Q96I82	304 aa		18.24	■□□□□ 0.51
NARF-223	ENST00000584192	LRRC37A	A6NMS7	1700 aa		18.23	■□□□□ 0.51
NARF-223	ENST00000584192	RABL6	Q3YEC7	729 aa	Predicted RBP	18.23	■□□□□ 0.51
NARF-223	ENST00000584192	LTBP3	Q9NS15	1303 aa		18.23	■□□□□ 0.51
NARF-223	ENST00000584192	COL4A1	P02462	1669 aa		18.22	■□□□□ 0.51
NARF-223	ENST00000584192	NFKBIE	O00221	500 aa		18.22	■□□□□ 0.51
NARF-223	ENST00000584192	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.22	■□□□□ 0.51
NARF-223	ENST00000584192	RASSF7	Q02833	373 aa		18.22	■□□□□ 0.51
NARF-223	ENST00000584192	PDE3A	Q14432	1141 aa		18.22	■□□□□ 0.51
NARF-223	ENST00000584192	TAF7L	Q5H9L4	462 aa		18.22	■□□□□ 0.51
NARF-223	ENST00000584192	ANKRD44	Q8N8A2	993 aa		18.22	■□□□□ 0.51
NARF-223	ENST00000584192	MPHOSPH8	Q99549	860 aa		18.22	■□□□□ 0.51
NARF-223	ENST00000584192	LRRFIP2	Q9Y608	721 aa	Known RBP	18.22	■□□□□ 0.51
NARF-223	ENST00000584192	PSMD1	Q99460	953 aa		18.21	■□□□□ 0.51
NARF-223	ENST00000584192	BSDC1	Q9NW68	430 aa	Predicted RBP	18.21	■□□□□ 0.51
NARF-223	ENST00000584192	SNED1	Q8TER0	1413 aa		18.21	■□□□□ 0.51
NARF-223	ENST00000584192	DICER1	Q9UPY3	1922 aa	Known RBP	18.21	■□□□□ 0.51
NARF-223	ENST00000584192	GNAI2	P04899	355 aa		18.2	■□□□□ 0.5
NARF-223	ENST00000584192	LMNB1	P20700	586 aa		18.2	■□□□□ 0.5
NARF-223	ENST00000584192	MVP	Q14764	893 aa	Known RBP	18.2	■□□□□ 0.5
NARF-223	ENST00000584192	DPP8	Q6V1X1	898 aa	Predicted RBP	18.2	■□□□□ 0.5
NARF-223	ENST00000584192	MPND	Q8N594	471 aa		18.2	■□□□□ 0.5
NARF-223	ENST00000584192	NEFL	P07196	543 aa		18.19	■□□□□ 0.5
NARF-223	ENST00000584192	SLC51A	Q86UW1	340 aa		18.19	■□□□□ 0.5
NARF-223	ENST00000584192	SUPT20H	Q8NEM7	779 aa		18.19	■□□□□ 0.5
NARF-223	ENST00000584192	CHMP4B	Q9H444	224 aa	Known RBP	18.19	■□□□□ 0.5
NARF-223	ENST00000584192	DDX19B	Q9UMR2	479 aa		18.19	■□□□□ 0.5
NARF-223	ENST00000584192	ZBTB7B	O15156	539 aa	Predicted RBP	18.18	■□□□□ 0.5
NARF-223	ENST00000584192	C9orf131	Q5VYM1	1079 aa		18.18	■□□□□ 0.5
NARF-223	ENST00000584192	RNF181	Q9P0P0	153 aa		18.18	■□□□□ 0.5
NARF-223	ENST00000584192	ANKIB1	Q9P2G1	1089 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms