RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF790Q6PG37 636 aa14.79□□□□□ -0.04
CCDC47-206ENST00000584112 KRT26Q7Z3Y9 468 aa14.79□□□□□ -0.04
CCDC47-206ENST00000584112 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
CCDC47-206ENST00000584112 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
CCDC47-206ENST00000584112 TEX13AQ9BXU3 409 aaPredicted RBP14.79□□□□□ -0.04
CCDC47-206ENST00000584112 PRUNE2Q8WUY3 3088 aa14.78□□□□□ -0.04
CCDC47-206ENST00000584112 HEG1Q9ULI3 1381 aa14.78□□□□□ -0.04
CCDC47-206ENST00000584112 CXCL9Q07325 125 aa14.78□□□□□ -0.04
CCDC47-206ENST00000584112 NOM1Q5C9Z4 860 aaKnown RBP14.78□□□□□ -0.04
CCDC47-206ENST00000584112 NIM1KQ8IY84 436 aa14.78□□□□□ -0.04
CCDC47-206ENST00000584112 RTF1Q92541 710 aaKnown RBP14.78□□□□□ -0.04
CCDC47-206ENST00000584112 ARMC5Q96C12 935 aa14.78□□□□□ -0.04
CCDC47-206ENST00000584112 FAM122AQ96E09 287 aa14.78□□□□□ -0.04
CCDC47-206ENST00000584112 SETDB2Q96T68 719 aa14.78□□□□□ -0.04
CCDC47-206ENST00000584112 NEFMP07197 916 aa14.77□□□□□ -0.05
CCDC47-206ENST00000584112 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
CCDC47-206ENST00000584112 EIF5P55010 431 aaKnown RBP14.77□□□□□ -0.05
CCDC47-206ENST00000584112 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
CCDC47-206ENST00000584112 DPF3Q92784 378 aa14.77□□□□□ -0.05
CCDC47-206ENST00000584112 FMNL2Q96PY5 1086 aa14.77□□□□□ -0.05
CCDC47-206ENST00000584112 TMEM106CQ9BVX2 250 aa14.77□□□□□ -0.05
CCDC47-206ENST00000584112 CACNA1AO00555 2505 aa14.77□□□□□ -0.05
CCDC47-206ENST00000584112 KDM3BQ7LBC6 1761 aa14.76□□□□□ -0.05
CCDC47-206ENST00000584112 A0A087WZG4 1122 aa14.76□□□□□ -0.05
CCDC47-206ENST00000584112 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
CCDC47-206ENST00000584112 ZNF496Q96IT1 587 aaPredicted RBP14.76□□□□□ -0.05
CCDC47-206ENST00000584112 ZNF330Q9Y3S2 320 aaPredicted RBP14.76□□□□□ -0.05
CCDC47-206ENST00000584112 MUC3AQ02505 3323 aa14.76□□□□□ -0.05
CCDC47-206ENST00000584112 WTIPA6NIX2 430 aaPredicted RBP14.75□□□□□ -0.05
CCDC47-206ENST00000584112 HTATSF1O43719 755 aaKnown RBP14.75□□□□□ -0.05
CCDC47-206ENST00000584112 PTPN22Q9Y2R2 807 aa14.75□□□□□ -0.05
CCDC47-206ENST00000584112 MYCP01106 439 aaPredicted RBP14.74□□□□□ -0.05
CCDC47-206ENST00000584112 AOC3Q16853 763 aa14.74□□□□□ -0.05
CCDC47-206ENST00000584112 BCL2L13Q9BXK5 485 aa14.74□□□□□ -0.05
CCDC47-206ENST00000584112 LAMA2P24043 3122 aaKnown RBP14.74□□□□□ -0.05
CCDC47-206ENST00000584112 KLRG2A4D1S0 409 aaPredicted RBP14.73□□□□□ -0.05
CCDC47-206ENST00000584112 PPIP5K2O43314 1243 aa14.73□□□□□ -0.05
CCDC47-206ENST00000584112 MKRN3Q13064 507 aaKnown RBP14.73□□□□□ -0.05
CCDC47-206ENST00000584112 SAMD7Q7Z3H4 446 aa14.73□□□□□ -0.05
CCDC47-206ENST00000584112 NPM2Q86SE8 214 aaKnown RBP14.73□□□□□ -0.05
CCDC47-206ENST00000584112 MTMR10Q9NXD2 777 aa14.73□□□□□ -0.05
CCDC47-206ENST00000584112 CNOT7Q9UIV1 285 aaKnown RBP14.73□□□□□ -0.05
CCDC47-206ENST00000584112 RAD17O75943 681 aa14.72□□□□□ -0.05
CCDC47-206ENST00000584112 EGFRP00533 1210 aa14.72□□□□□ -0.05
CCDC47-206ENST00000584112 IL6STP40189 918 aaPredicted RBP14.72□□□□□ -0.05
CCDC47-206ENST00000584112 MOB2Q70IA6 237 aa14.72□□□□□ -0.05
CCDC47-206ENST00000584112 MCM10Q7L590 875 aa14.72□□□□□ -0.05
CCDC47-206ENST00000584112 NBPF5PQ86XG9 351 aaPredicted RBP14.72□□□□□ -0.05
CCDC47-206ENST00000584112 PNNQ9H307 717 aaKnown RBP14.72□□□□□ -0.05
CCDC47-206ENST00000584112 TM4SF4P48230 202 aa14.71□□□□□ -0.05
CCDC47-206ENST00000584112 RALBP1Q15311 655 aa14.71□□□□□ -0.05
CCDC47-206ENST00000584112 SLC4A8Q2Y0W8 1093 aa14.71□□□□□ -0.05
CCDC47-206ENST00000584112 TBC1D10BQ4KMP7 808 aaPredicted RBP14.71□□□□□ -0.05
CCDC47-206ENST00000584112 ANKRD13DQ6ZTN6 518 aa14.71□□□□□ -0.05
CCDC47-206ENST00000584112 ZNF333Q96JL9 665 aa14.71□□□□□ -0.05
CCDC47-206ENST00000584112 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
CCDC47-206ENST00000584112 CAMTA2O94983 1202 aa14.7□□□□□ -0.06
CCDC47-206ENST00000584112 ALDH1B1P30837 517 aa14.7□□□□□ -0.06
CCDC47-206ENST00000584112 MICALL2Q8IY33 904 aa14.7□□□□□ -0.06
CCDC47-206ENST00000584112 NUP98P52948 1817 aa14.7□□□□□ -0.06
CCDC47-206ENST00000584112 KCNQ3O43525 872 aa14.69□□□□□ -0.06
CCDC47-206ENST00000584112 SNRPA1P09661 255 aaKnown RBP14.69□□□□□ -0.06
CCDC47-206ENST00000584112 CAP1Q01518 475 aa14.69□□□□□ -0.06
CCDC47-206ENST00000584112 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
CCDC47-206ENST00000584112 CDCA5Q96FF9 252 aa14.69□□□□□ -0.06
CCDC47-206ENST00000584112 ZNRF3Q9ULT6 936 aa14.69□□□□□ -0.06
CCDC47-206ENST00000584112 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
CCDC47-206ENST00000584112 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
CCDC47-206ENST00000584112 A0A1W2PPC1 479 aa14.68□□□□□ -0.06
CCDC47-206ENST00000584112 FAM177BA6PVY3 158 aa14.68□□□□□ -0.06
CCDC47-206ENST00000584112 A1BGP04217 495 aa14.68□□□□□ -0.06
CCDC47-206ENST00000584112 DCTN1Q14203 1278 aa14.68□□□□□ -0.06
CCDC47-206ENST00000584112 CD99L2Q8TCZ2 262 aa14.68□□□□□ -0.06
CCDC47-206ENST00000584112 ASTN2O75129 1339 aaPredicted RBP14.67□□□□□ -0.06
CCDC47-206ENST00000584112 CDHR2Q9BYE9 1310 aa14.67□□□□□ -0.06
CCDC47-206ENST00000584112 H7C1D1 291 aa14.67□□□□□ -0.06
CCDC47-206ENST00000584112 RBM26Q5T8P6 1007 aaKnown RBP14.67□□□□□ -0.06
CCDC47-206ENST00000584112 PNISRQ8TF01 805 aaKnown RBP14.67□□□□□ -0.06
CCDC47-206ENST00000584112 DCPSQ96C86 337 aaKnown RBP14.67□□□□□ -0.06
CCDC47-206ENST00000584112 SNX27Q96L92 541 aa14.67□□□□□ -0.06
CCDC47-206ENST00000584112 PLEKHF1Q96S99 279 aa14.67□□□□□ -0.06
CCDC47-206ENST00000584112 CFHR5Q9BXR6 569 aa14.67□□□□□ -0.06
CCDC47-206ENST00000584112 STAP2Q9UGK3 403 aa14.67□□□□□ -0.06
CCDC47-206ENST00000584112 USP16Q9Y5T5 823 aa14.67□□□□□ -0.06
CCDC47-206ENST00000584112 UBE2Q2LH0YL09 131 aa14.66□□□□□ -0.06
CCDC47-206ENST00000584112 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
CCDC47-206ENST00000584112 DDX10Q13206 875 aaKnown RBP14.66□□□□□ -0.06
CCDC47-206ENST00000584112 NFE2L2Q16236 605 aa14.66□□□□□ -0.06
CCDC47-206ENST00000584112 ZNF609O15014 1411 aa14.66□□□□□ -0.06
CCDC47-206ENST00000584112 CC2D2BQ6DHV5 1058 aa14.65□□□□□ -0.06
CCDC47-206ENST00000584112 DZIP3Q86Y13 1208 aaKnown RBP14.65□□□□□ -0.06
CCDC47-206ENST00000584112 MYBBP1AQ9BQG0 1328 aaKnown RBP14.65□□□□□ -0.06
CCDC47-206ENST00000584112 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
CCDC47-206ENST00000584112 SHISA4Q96DD7 197 aa14.64□□□□□ -0.07
CCDC47-206ENST00000584112 PRAMEF22A3QJZ6 481 aa14.63□□□□□ -0.07
CCDC47-206ENST00000584112 CLEC4GQ6UXB4 293 aa14.63□□□□□ -0.07
CCDC47-206ENST00000584112 EFCC1Q9HA90 598 aa14.63□□□□□ -0.07
CCDC47-206ENST00000584112 GGA3Q9NZ52 723 aa14.63□□□□□ -0.07
CCDC47-206ENST00000584112 ZNF652Q9Y2D9 606 aa14.63□□□□□ -0.07
CCDC47-206ENST00000584112 RGL2O15211 777 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms