RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 BTBD11A6QL63 1104 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 ST5P78524 1137 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 ADGRD1Q6QNK2 874 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 NPM2Q86SE8 214 aaKnown RBP10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 DZIP3Q86Y13 1208 aaKnown RBP10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 SETDB2Q96T68 719 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 RSPH6AQ9H0K4 717 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 TAOK3Q9H2K8 898 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 PDZRN3Q9UPQ7 1066 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 USP16Q9Y5T5 823 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 SCN4AP35499 1836 aa10.44□□□□□ -0.74
SMCHD1-210ENST00000583800 LTBP3Q9NS15 1303 aa10.43□□□□□ -0.74
SMCHD1-210ENST00000583800 HSPA1AP0DMV8 641 aaKnown RBP10.43□□□□□ -0.74
SMCHD1-210ENST00000583800 HSPA1BP0DMV9 641 aaKnown RBP10.43□□□□□ -0.74
SMCHD1-210ENST00000583800 SRGNP10124 158 aa10.43□□□□□ -0.74
SMCHD1-210ENST00000583800 PRPF40BQ6NWY9 871 aaKnown RBP10.43□□□□□ -0.74
SMCHD1-210ENST00000583800 CNKSR1Q969H4 720 aa10.43□□□□□ -0.74
SMCHD1-210ENST00000583800 NUP98P52948 1817 aa10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 ARHGAP33O14559 1287 aa10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 DDNO94850 711 aaPredicted RBP10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 STYK1Q6J9G0 422 aa10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 MCM10Q7L590 875 aa10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 MASTLQ96GX5 879 aa10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 SLC24A3Q9HC58 644 aa10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 KDM3BQ7LBC6 1761 aa10.42□□□□□ -0.74
SMCHD1-210ENST00000583800 DCTN1Q14203 1278 aa10.41□□□□□ -0.74
SMCHD1-210ENST00000583800 NBPF5PQ86XG9 351 aaPredicted RBP10.41□□□□□ -0.74
SMCHD1-210ENST00000583800 TNS4Q8IZW8 715 aa10.41□□□□□ -0.74
SMCHD1-210ENST00000583800 CFAP53Q96M91 514 aa10.41□□□□□ -0.74
SMCHD1-210ENST00000583800 U2AF1L5P0DN76 240 aaPredicted RBP10.4□□□□□ -0.74
SMCHD1-210ENST00000583800 U2AF1Q01081 240 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMCHD1-210ENST00000583800 RTF1Q92541 710 aaKnown RBP10.4□□□□□ -0.74
SMCHD1-210ENST00000583800 ADAMTSL1Q8N6G6 1762 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 FAM177BA6PVY3 158 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 NBPF26B4DH59 902 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 SNRPA1P09661 255 aaKnown RBP10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 CCDC93Q567U6 631 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 SOGA3Q5TF21 947 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 NBPF10Q6P3W6 841 aaKnown RBP10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 OLFM4Q6UX06 510 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 CLEC4GQ6UXB4 293 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 MKRN1Q9UHC7 482 aaKnown RBP10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 NIP7Q9Y221 180 aaKnown RBP eCLIP10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 ZNF652Q9Y2D9 606 aa10.39□□□□□ -0.75
SMCHD1-210ENST00000583800 ZNF541Q9H0D2 1346 aa10.38□□□□□ -0.75
SMCHD1-210ENST00000583800 NPR1P16066 1061 aa10.38□□□□□ -0.75
SMCHD1-210ENST00000583800 PPP2R1AP30153 589 aa10.38□□□□□ -0.75
SMCHD1-210ENST00000583800 C7orf43Q8WVR3 580 aa10.38□□□□□ -0.75
SMCHD1-210ENST00000583800 ZNF277Q9NRM2 450 aaPredicted RBP10.38□□□□□ -0.75
SMCHD1-210ENST00000583800 IQCA1LA6NCM1 817 aa10.37□□□□□ -0.75
SMCHD1-210ENST00000583800 FKBP4Q02790 459 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMCHD1-210ENST00000583800 HLFQ16534 295 aa10.37□□□□□ -0.75
SMCHD1-210ENST00000583800 TAF1DQ9H5J8 278 aaPredicted RBP10.37□□□□□ -0.75
SMCHD1-210ENST00000583800 ABCC12Q96J65 1359 aa10.37□□□□□ -0.75
SMCHD1-210ENST00000583800 PASKQ96RG2 1323 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 KLRG2A4D1S0 409 aaPredicted RBP10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 TK2O00142 265 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 HRO43593 1189 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 TPTE2Q6XPS3 522 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 LDHDQ86WU2 507 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 MIS18AQ9NYP9 233 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 CNTNAP1P78357 1384 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 LTBP1Q14766 1721 aa10.36□□□□□ -0.75
SMCHD1-210ENST00000583800 COL4A5P29400 1685 aa10.35□□□□□ -0.75
SMCHD1-210ENST00000583800 SNED1Q8TER0 1413 aa10.35□□□□□ -0.75
SMCHD1-210ENST00000583800 PPP1R37O75864 691 aa10.35□□□□□ -0.75
SMCHD1-210ENST00000583800 EAPPQ56P03 285 aaPredicted RBP10.35□□□□□ -0.75
SMCHD1-210ENST00000583800 NGEFQ8N5V2 710 aa10.35□□□□□ -0.75
SMCHD1-210ENST00000583800 RNF123Q5XPI4 1314 aa10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 TESPA1A2RU30 521 aaPredicted RBP10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 HTATSF1O43719 755 aaKnown RBP10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 GTF2E1P29083 439 aaPredicted RBP10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 DMRTA1Q5VZB9 504 aa10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 LAMB2P55268 1798 aa10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 ANKRD36CQ5JPF3 1778 aa10.34□□□□□ -0.75
SMCHD1-210ENST00000583800 FOXN1O15353 648 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 ALDH1B1P30837 517 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 EPHX2P34913 555 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 SLC51AQ86UW1 340 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 SYNE4Q8N205 404 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 HACL1Q9UJ83 578 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 TRPM7Q96QT4 1865 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 MAP3K15Q6ZN16 1313 aa10.33□□□□□ -0.76
SMCHD1-210ENST00000583800 TMEM88BA6NKF7 163 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 FZD9O00144 591 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 ZMYND10O75800 440 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 ITGBL1O95965 494 aaPredicted RBP10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 MYL6BP14649 208 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 GPTP24298 496 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 PSEN2P49810 448 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 CRY2Q49AN0 593 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 MAP1SQ66K74 1059 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms