RNA–Protein interactions for RNA: ENST00000583439.1

DHX40-209, Transcript of DEAH-box helicase 40, humanhuman

TSL 3

Gene DHX40, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-209ENST00000583439 PCSK7Q16549 785 aa7.46□□□□□ -1.22
DHX40-209ENST00000583439 CMTR1Q8N1G2 835 aaKnown RBP7.46□□□□□ -1.22
DHX40-209ENST00000583439 ZFP64Q9NPA5 681 aa7.46□□□□□ -1.22
DHX40-209ENST00000583439 DMGDHQ9UI17 866 aaKnown RBP7.46□□□□□ -1.22
DHX40-209ENST00000583439 USP20Q9Y2K6 914 aa7.46□□□□□ -1.22
DHX40-209ENST00000583439 NID1P14543 1247 aa7.45□□□□□ -1.22
DHX40-209ENST00000583439 RAC1P63000 192 aa7.45□□□□□ -1.22
DHX40-209ENST00000583439 ARTNQ5T4W7 220 aa7.45□□□□□ -1.22
DHX40-209ENST00000583439 C20orf204Q6ZNR8 217 aa7.45□□□□□ -1.22
DHX40-209ENST00000583439 RGL4Q8IZJ4 473 aa7.45□□□□□ -1.22
DHX40-209ENST00000583439 PRDM6Q9NQX0 595 aa7.45□□□□□ -1.22
DHX40-209ENST00000583439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.44□□□□□ -1.22
DHX40-209ENST00000583439 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
DHX40-209ENST00000583439 FKBP5Q13451 457 aaPredicted RBP7.44□□□□□ -1.22
DHX40-209ENST00000583439 ELMSAN1Q6PJG2 1045 aa7.44□□□□□ -1.22
DHX40-209ENST00000583439 TREML1Q86YW5 311 aa7.44□□□□□ -1.22
DHX40-209ENST00000583439 DMRTC2Q8IXT2 367 aaPredicted RBP7.44□□□□□ -1.22
DHX40-209ENST00000583439 MKNK1Q9BUB5 465 aa7.44□□□□□ -1.22
DHX40-209ENST00000583439 ACIN1Q9UKV3 1341 aaKnown RBP7.44□□□□□ -1.22
DHX40-209ENST00000583439 COL9A3Q14050 684 aaPredicted RBP7.43□□□□□ -1.22
DHX40-209ENST00000583439 SWI5Q1ZZU3 235 aa7.43□□□□□ -1.22
DHX40-209ENST00000583439 FOXD4L6Q3SYB3 417 aaPredicted RBP7.43□□□□□ -1.22
DHX40-209ENST00000583439 FOXD4L3Q6VB84 417 aaPredicted RBP7.43□□□□□ -1.22
DHX40-209ENST00000583439 HFE2Q6ZVN8 426 aa7.43□□□□□ -1.22
DHX40-209ENST00000583439 DHX32Q7L7V1 743 aaKnown RBP7.43□□□□□ -1.22
DHX40-209ENST00000583439 NBPF11Q86T75 865 aa7.43□□□□□ -1.22
DHX40-209ENST00000583439 CCDC97Q96F63 343 aaPredicted RBP7.43□□□□□ -1.22
DHX40-209ENST00000583439 LRFN2Q9ULH4 789 aa7.43□□□□□ -1.22
DHX40-209ENST00000583439 RTCBQ9Y3I0 505 aaKnown RBP7.43□□□□□ -1.22
DHX40-209ENST00000583439 A0A0A0MRY4 1105 aa7.42□□□□□ -1.22
DHX40-209ENST00000583439 XYLBO75191 536 aa7.42□□□□□ -1.22
DHX40-209ENST00000583439 AFF1P51825 1210 aaKnown RBP7.42□□□□□ -1.22
DHX40-209ENST00000583439 STK32AQ8WU08 396 aa7.42□□□□□ -1.22
DHX40-209ENST00000583439 MYO19Q96H55 970 aa7.42□□□□□ -1.22
DHX40-209ENST00000583439 ZMYND15Q9H091 742 aa7.42□□□□□ -1.22
DHX40-209ENST00000583439 ZFATQ9P243 1243 aa7.42□□□□□ -1.22
DHX40-209ENST00000583439 NAGPAQ9UK23 515 aa7.42□□□□□ -1.22
DHX40-209ENST00000583439 MAP3K6O95382 1288 aa7.41□□□□□ -1.22
DHX40-209ENST00000583439 GRNP28799 593 aaKnown RBP7.41□□□□□ -1.22
DHX40-209ENST00000583439 NAA30Q147X3 362 aaPredicted RBP7.41□□□□□ -1.22
DHX40-209ENST00000583439 COX20Q5RI15 118 aa7.41□□□□□ -1.22
DHX40-209ENST00000583439 USP21Q9UK80 565 aa7.41□□□□□ -1.22
DHX40-209ENST00000583439 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
DHX40-209ENST00000583439 C9orf172C9J069 976 aa7.4□□□□□ -1.22
DHX40-209ENST00000583439 OPLAHO14841 1288 aa7.4□□□□□ -1.22
DHX40-209ENST00000583439 ELNP15502 786 aa7.4□□□□□ -1.22
DHX40-209ENST00000583439 EIF2AK2P19525 551 aaKnown RBP7.4□□□□□ -1.22
DHX40-209ENST00000583439 C16orf46Q6P387 395 aa7.4□□□□□ -1.22
DHX40-209ENST00000583439 PSAPP07602 524 aa7.39□□□□□ -1.23
DHX40-209ENST00000583439 BRD2P25440 801 aaKnown RBP7.39□□□□□ -1.23
DHX40-209ENST00000583439 PERM1Q5SV97 790 aa7.39□□□□□ -1.23
DHX40-209ENST00000583439 SHISA2Q6UWI4 295 aa7.39□□□□□ -1.23
DHX40-209ENST00000583439 WFDC8Q8IUA0 241 aa7.39□□□□□ -1.23
DHX40-209ENST00000583439 SMG9Q9H0W8 520 aaKnown RBP7.39□□□□□ -1.23
DHX40-209ENST00000583439 TPSG1Q9NRR2 321 aa7.39□□□□□ -1.23
DHX40-209ENST00000583439 ELOAQ14241 798 aaKnown RBP7.38□□□□□ -1.23
DHX40-209ENST00000583439 RSPO4Q2I0M5 234 aaPredicted RBP7.38□□□□□ -1.23
DHX40-209ENST00000583439 MSL1Q68DK7 614 aa7.38□□□□□ -1.23
DHX40-209ENST00000583439 SAP130Q9H0E3 1048 aa7.38□□□□□ -1.23
DHX40-209ENST00000583439 RBSNQ9H1K0 784 aa7.38□□□□□ -1.23
DHX40-209ENST00000583439 ZBTB42B2RXF5 422 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 GHRHP01286 108 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 GPLD1P80108 840 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 NRG1Q02297 640 aaPredicted RBP7.37□□□□□ -1.23
DHX40-209ENST00000583439 TMEM164Q5U3C3 297 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 TRPM4Q8TD43 1214 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 NSUN5Q96P11 429 aaKnown RBP7.37□□□□□ -1.23
DHX40-209ENST00000583439 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 KRTAP4-7Q9BYR0 210 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 C11orf16Q9NQ32 467 aa7.37□□□□□ -1.23
DHX40-209ENST00000583439 TLR7Q9NYK1 1049 aaKnown RBP7.37□□□□□ -1.23
DHX40-209ENST00000583439 J3QW42 95 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 ATG7O95352 703 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 SELPP16109 830 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 PLAURQ03405 335 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 OCLNQ16625 522 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 GDF6Q6KF10 455 aaPredicted RBP7.36□□□□□ -1.23
DHX40-209ENST00000583439 CAPN12Q6ZSI9 719 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 FMR1NBQ8N0W7 255 aaPredicted RBP7.36□□□□□ -1.23
DHX40-209ENST00000583439 PIK3R5Q8WYR1 880 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 FAM13BQ9NYF5 915 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 FRRS1LQ9P0K9 344 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 SERPINA10Q9UK55 444 aa7.36□□□□□ -1.23
DHX40-209ENST00000583439 LOC102724428A0A0B4J2F2 783 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 ARID3CA6NKF2 412 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 MMP20O60882 483 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 PTCD1O75127 700 aaKnown RBP7.35□□□□□ -1.23
DHX40-209ENST00000583439 NRLP54845 237 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 SIK1P57059 783 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 MBTPS1Q14703 1052 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 NKAPLQ5M9Q1 402 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 PBXIP1Q96AQ6 731 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 PLD4Q96BZ4 506 aa7.35□□□□□ -1.23
DHX40-209ENST00000583439 LENG1Q96BZ8 264 aaPredicted RBP7.35□□□□□ -1.23
DHX40-209ENST00000583439 CXXC1Q9P0U4 656 aaPredicted RBP7.35□□□□□ -1.23
DHX40-209ENST00000583439 UBAP1LF5GYI3 381 aa7.34□□□□□ -1.23
DHX40-209ENST00000583439 EGFRP00533 1210 aa7.34□□□□□ -1.23
DHX40-209ENST00000583439 FAM69CQ0P6D2 419 aa7.34□□□□□ -1.23
DHX40-209ENST00000583439 KCNMB2Q9Y691 235 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms