RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 CRY2Q49AN0 593 aa17.63■□□□□ 0.41
GGA3-216ENST00000583282 EPHA10Q5JZY3 1008 aa17.63■□□□□ 0.41
GGA3-216ENST00000583282 MASTLQ96GX5 879 aa17.63■□□□□ 0.41
GGA3-216ENST00000583282 UTYO14607 1347 aa17.63■□□□□ 0.41
GGA3-216ENST00000583282 LRRC37AA6NMS7 1700 aa17.62■□□□□ 0.41
GGA3-216ENST00000583282 NPR1P16066 1061 aa17.62■□□□□ 0.41
GGA3-216ENST00000583282 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
GGA3-216ENST00000583282 BICC1Q9H694 974 aaKnown RBP17.62■□□□□ 0.41
GGA3-216ENST00000583282 C1orf115Q9H7X2 142 aa17.62■□□□□ 0.41
GGA3-216ENST00000583282 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
GGA3-216ENST00000583282 LRRFIP2Q9Y608 721 aaKnown RBP17.62■□□□□ 0.41
GGA3-216ENST00000583282 KLRG2A4D1S0 409 aaPredicted RBP17.61■□□□□ 0.41
GGA3-216ENST00000583282 CENPBP07199 599 aaPredicted RBP17.61■□□□□ 0.41
GGA3-216ENST00000583282 KCNA3P22001 575 aa17.61■□□□□ 0.41
GGA3-216ENST00000583282 STYK1Q6J9G0 422 aa17.61■□□□□ 0.41
GGA3-216ENST00000583282 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
GGA3-216ENST00000583282 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
GGA3-216ENST00000583282 GREM2Q9H772 168 aa17.61■□□□□ 0.41
GGA3-216ENST00000583282 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
GGA3-216ENST00000583282 BCS1LQ9Y276 419 aa17.61■□□□□ 0.41
GGA3-216ENST00000583282 GNAI3P08754 354 aa17.6■□□□□ 0.41
GGA3-216ENST00000583282 FOXO4P98177 505 aa17.6■□□□□ 0.41
GGA3-216ENST00000583282 PDE3AQ14432 1141 aa17.6■□□□□ 0.41
GGA3-216ENST00000583282 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
GGA3-216ENST00000583282 DDX46Q7L014 1031 aaKnown RBP17.6■□□□□ 0.41
GGA3-216ENST00000583282 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
GGA3-216ENST00000583282 KAZALD1Q96I82 304 aa17.6■□□□□ 0.41
GGA3-216ENST00000583282 SEC31BQ9NQW1 1179 aa17.6■□□□□ 0.41
GGA3-216ENST00000583282 PIM2Q9P1W9 311 aa17.6■□□□□ 0.41
GGA3-216ENST00000583282 A0A1B0GUL6 1792 aa17.59■□□□□ 0.41
GGA3-216ENST00000583282 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
GGA3-216ENST00000583282 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
GGA3-216ENST00000583282 LMBR1LQ6UX01 489 aa17.59■□□□□ 0.41
GGA3-216ENST00000583282 TTLL6Q8N841 843 aa17.59■□□□□ 0.41
GGA3-216ENST00000583282 TTLL11Q8NHH1 800 aa17.59■□□□□ 0.41
GGA3-216ENST00000583282 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
GGA3-216ENST00000583282 IRX6P78412 446 aaPredicted RBP17.58■□□□□ 0.4
GGA3-216ENST00000583282 GRAPQ13588 217 aa17.58■□□□□ 0.4
GGA3-216ENST00000583282 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.4
GGA3-216ENST00000583282 GRAPLQ8TC17 118 aaPredicted RBP17.58■□□□□ 0.4
GGA3-216ENST00000583282 CELF1Q92879 486 aaKnown RBP17.58■□□□□ 0.4
GGA3-216ENST00000583282 CNKSR1Q969H4 720 aa17.58■□□□□ 0.4
GGA3-216ENST00000583282 CRBNQ96SW2 442 aa17.58■□□□□ 0.4
GGA3-216ENST00000583282 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
GGA3-216ENST00000583282 RTL9Q8NET4 1388 aa17.57■□□□□ 0.4
GGA3-216ENST00000583282 YBX3P16989 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
GGA3-216ENST00000583282 ITGA6P23229 1130 aa17.57■□□□□ 0.4
GGA3-216ENST00000583282 GNAI2P04899 355 aa17.56■□□□□ 0.4
GGA3-216ENST00000583282 HOXA10P31260 410 aaPredicted RBP17.56■□□□□ 0.4
GGA3-216ENST00000583282 GPR162Q16538 588 aa17.56■□□□□ 0.4
GGA3-216ENST00000583282 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
GGA3-216ENST00000583282 SRCAPQ6ZRS2 3230 aa17.56■□□□□ 0.4
GGA3-216ENST00000583282 ZBTB7BO15156 539 aaPredicted RBP17.55■□□□□ 0.4
GGA3-216ENST00000583282 C21orf2O43822 256 aa17.55■□□□□ 0.4
GGA3-216ENST00000583282 ALDH1B1P30837 517 aa17.55■□□□□ 0.4
GGA3-216ENST00000583282 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
GGA3-216ENST00000583282 TAF7LQ5H9L4 462 aa17.55■□□□□ 0.4
GGA3-216ENST00000583282 OLFM4Q6UX06 510 aa17.55■□□□□ 0.4
GGA3-216ENST00000583282 CDC5LQ99459 802 aaKnown RBP17.55■□□□□ 0.4
GGA3-216ENST00000583282 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
GGA3-216ENST00000583282 CSF1RP07333 972 aa17.54■□□□□ 0.4
GGA3-216ENST00000583282 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
GGA3-216ENST00000583282 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
GGA3-216ENST00000583282 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
GGA3-216ENST00000583282 HDAC5Q9UQL6 1122 aa17.54■□□□□ 0.4
GGA3-216ENST00000583282 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
GGA3-216ENST00000583282 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
GGA3-216ENST00000583282 LTBP1Q14766 1721 aa17.52■□□□□ 0.4
GGA3-216ENST00000583282 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
GGA3-216ENST00000583282 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.4
GGA3-216ENST00000583282 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.39
GGA3-216ENST00000583282 CCDC93Q567U6 631 aa17.51■□□□□ 0.39
GGA3-216ENST00000583282 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
GGA3-216ENST00000583282 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
GGA3-216ENST00000583282 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
GGA3-216ENST00000583282 RASSF7Q02833 373 aa17.5■□□□□ 0.39
GGA3-216ENST00000583282 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
GGA3-216ENST00000583282 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
GGA3-216ENST00000583282 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
GGA3-216ENST00000583282 TIAM2Q8IVF5 1701 aa17.5■□□□□ 0.39
GGA3-216ENST00000583282 SNED1Q8TER0 1413 aa17.49■□□□□ 0.39
GGA3-216ENST00000583282 CEP85Q6P2H3 762 aa17.49■□□□□ 0.39
GGA3-216ENST00000583282 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
GGA3-216ENST00000583282 SIL1Q9H173 461 aa17.49■□□□□ 0.39
GGA3-216ENST00000583282 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
GGA3-216ENST00000583282 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
GGA3-216ENST00000583282 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
GGA3-216ENST00000583282 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
GGA3-216ENST00000583282 BBOX1O75936 387 aa17.48■□□□□ 0.39
GGA3-216ENST00000583282 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
GGA3-216ENST00000583282 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
GGA3-216ENST00000583282 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
GGA3-216ENST00000583282 MTX1Q13505 466 aa17.47■□□□□ 0.39
GGA3-216ENST00000583282 SOGA3Q5TF21 947 aa17.47■□□□□ 0.39
GGA3-216ENST00000583282 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
GGA3-216ENST00000583282 TMC4Q7Z404 712 aa17.47■□□□□ 0.39
GGA3-216ENST00000583282 C7orf43Q8WVR3 580 aa17.47■□□□□ 0.39
GGA3-216ENST00000583282 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
GGA3-216ENST00000583282 NFKBIEO00221 500 aa17.46■□□□□ 0.39
GGA3-216ENST00000583282 GPSM2P81274 684 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms